mRNA_P-wetherbeei_contig7461.1.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7461.1.5
Unique NamemRNA_P-wetherbeei_contig7461.1.5
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A836CF84_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF84_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.260e-34
Identity = 102/284 (35.92%), Postives = 136/284 (47.89%), Query Frame = 2
Query:  131 IAFIFGSDLPRKTSKFMFANVEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAE-QSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGGG 979
            + F+F + LPR    F F  +   +   DD +PGA+QSG YLWPA+  LA+Y+V   + +P G +LELGAG GL GL AAQL   + A + TDHD GV+  L+E     + A  AKA  ++A  LSWG VD   +  +    AAAG+                                                    +A  F L+LGSD++Y  SVV  LF T  A LA P  +        F+M QSFAYD+  E ++D  C+   LRR VV D L + GG
Sbjct:    5 LGFMFDTGLPRTQRTFTFGPISTTLQFVDD-EPGAVQSGHYLWPASPCLASYLVEQRESIPAGSVLELGAGCGLAGLTAAQLTGVS-AVVFTDHDFGVIELLQENIEHLRQAGSAKAGVLAAQSLSWGEVD---QKTVAAVHAAAGL-------------------------------------------------QQPQAGAFSLVLGSDVIYAKSVVRPLFATACAFLAQPHGQ--------FIMSQSFAYDAETEAEMDAACAAHKLRRRVVHDALGTEGG 226          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: W4G5T8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5T8_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.620e-30
Identity = 104/298 (34.90%), Postives = 140/298 (46.98%), Query Frame = 2
Query:  116 DEDL--GIAFIFGSDLPRKTSKFMFA---------NVEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGG 976
            DEDL   + F++   L + T +F +           V V +S   D DPG +QSG Y+WPAA AL  Y+V  + +LP G+I+ELGAG GL GL  AQL + ++  + TDHDPGV+  +     +QS R  K A      L WGP      AN +D++ A                                                 GGT      +  LI+G+D++Y   +V LLF TVD LL    S   Q     FLMC SF+YD   E +ID  CS++GL RT+V DTL + G
Sbjct:   39 DEDLLADVGFMYDDCLEKVTCEFTYGVTSDTDPTPRVSVFLSYVQD-DPGFVQSGHYVWPAAPALCEYMVAHFKELPRGNIVELGAGCGLAGLVFAQL-DPSSTIIFTDHDPGVLKTIEHNVTKQSHRP-KQARCHTQSLRWGPQG----ANEVDSIDAL-----------------------------------------------QGGT------KTDLIVGTDVIYAREIVALLFWTVDRLLT--SSSEGQ-----FLMCSSFSYDEDTEKEIDAACSKYGLVRTIVTDTLGTKG 269          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A6G0XQM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQM1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 9.110e-30
Identity = 98/300 (32.67%), Postives = 143/300 (47.67%), Query Frame = 2
Query:  113 DDEDLGIAFIFGSDLPRKTSKFMFAN------------VEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGG 976
            DD    I F++   L + T +F + +            V V +S   D +PG +QSG Y+WPAA AL AY+   +D LP G+I+ELGAG GL GL  AQL + ++  + TDHDPGV+  ++   ++Q+ R    A      L WGP      AN ++ +AA   +    S +                                               +  LI+G+D++Y   +V LLF TVD LL    + T Q     FLMC SF+YD   E +ID  C+++GL RT+++DTL+S G
Sbjct:   34 DDLMADIGFMYDDCLEKVTCEFTYGSTVNPASGAVEPRVSVLLSYVQD-EPGFVQSGHYVWPAAPALCAYMEENFDQLPRGNIVELGAGCGLAGLVFAQL-DPSSTVIFTDHDPGVLKTIQHNVSKQAHR--PQAVCHTQSLRWGPQG----ANEVEQIAAIQTSDDATSAT----------------------------------------------QKTDLIVGTDVIYAREIVGLLFWTVDRLLK---TTTGQ-----FLMCSSFSYDEDTEREIDVACAQYGLVRTIIIDTLASQG 271          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A425CHD3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CHD3_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.860e-28
Identity = 99/287 (34.49%), Postives = 140/287 (48.78%), Query Frame = 2
Query:  125 LGIAFIFGSDLPRKTSKFMFA-NVEVNVSIA-DDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLV-TDHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGG 976
            + + F+F + L + T ++ +  N +V+V +     +PGALQSG Y+WPAA AL  Y+ +  D +P G+++ELGAG GL GLA AQL  R +AT++ TDHDPGV+  +     +Q    AK    S   L WGP D A     L+ +         V   G+                        N+ I +                  LI+GSD++Y   VV LLF TV+ LLA         P   FLMC SF YD A E +I+   ++ GL+R +V  TL+ GG
Sbjct:   15 MDVGFMFDTFLEKVTCRYEYGINTDVSVLLTYTKEEPGALQSGHYVWPAAPALCEYLTKNRDVIPRGNVVELGAGCGLTGLAVAQL--RPDATVIFTDHDPGVLKVIEHNAGQQERVQAKCLTQS---LRWGP-DGAKEIETLEKL--------QVGPDGS------------------------NQNITE------------------LIVGSDVIYAREVVPLLFWTVNRLLA---------PDGVFLMCSSFGYDDATEQEIEVQSAKCGLKRKIVECTLNEGG 236          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A024UA67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA67_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.300e-28
Identity = 98/298 (32.89%), Postives = 136/298 (45.64%), Query Frame = 2
Query:  116 DEDL--GIAFIFGSDLPRKTSKFMFA---------NVEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGG 976
            DEDL   + F++   L + T +F F           V V +S   D DPG +QSG Y+WPAA AL  Y+   + +LP G+++ELGAG GL GL  AQL + ++  + TDHDPGV+  +     +QS R   AA  + +L  WGP      AN +D +AA                                                      +   +  LI+G+D++Y   +V LLF TV  LL    S         FLMC SF+YD   E +ID  C+++ L RT+V DTL S G
Sbjct:   36 DEDLLADVGFMYDDCLEKVTCEFTFGVTSDSDPTPRVSVFLSYVQD-DPGFVQSGHYVWPAAPALCEYMEAHFKELPRGNVVELGAGCGLAGLVFAQL-DPSSTIIFTDHDPGVLKTIEHNVTKQSHRPVHAACHTQSLR-WGPQG----ANEIDRIAAL-----------------------------------------------------QGGQKADLIVGTDVIYAREIVALLFWTVHQLLKKSTSGEGNHE-GQFLMCSSFSYDEDTENEIDVACAKYALVRTIVTDTLESKG 272          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A485LRQ2_9STRA (Aste57867_24672 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRQ2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.230e-26
Identity = 97/302 (32.12%), Postives = 141/302 (46.69%), Query Frame = 2
Query:  110 GDDEDLG-IAFIFGSDLPRKTSKFMFAN------------VEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGG 976
            GD+E L  + F++   L + T +F +              V V +S   D +PG +QSG Y+WPAA +L  Y+ +   DLP G+++ELGAG GL GL  AQL + ++  + TDHDPGV+  +     +QS R    A      L WGP      AN +D +AA         +SG+G                                          A +  LI+G+D++Y   +V LLF TVD LL        +A    FLMC SF+YD   E +ID   +++GL RT++ D L++ G
Sbjct:   37 GDEELLADVGFMYDDCLEKVTCEFTYGTTTDAATGTVVPRVSVFLSYVQD-EPGFVQSGHYVWPAAPSLCEYMEQHIQDLPRGNVVELGAGCGLAGLVFAQL-DPSSTVIFTDHDPGVLKTIEHNVTKQSHRAH--AVCHTQSLRWGPQG----ANEVDRIAAM--------QSGDGV-----------------------------------------AQKTALIVGTDVIYAREIVSLLFWTVDRLL--------RAADGQFLMCSSFSYDEDTEREIDAAVAQYGLVRTIISDALAAKG 273          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A662XQW1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQW1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 9.610e-26
Identity = 98/284 (34.51%), Postives = 134/284 (47.18%), Query Frame = 2
Query:  131 IAFIFGSDLPRKTSKFMF-ANVEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLV-TDHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGG 976
            + F+F + L + T +F + A+V V ++ A + +PGALQSG Y+WPAA AL  Y+    + +P G+++ELGAG GL GLA AQL  R +AT++ TDHDPGV+ ++ E  A Q  RV  A    +  L WGP   A  A L    + A    T                                                       LI+GSD++Y   VV LLF TVD LL        + P   FLMC SF YD   E +ID   +++ L R +V  TL+  G
Sbjct:   31 VGFMFDACLEKVTCRFDYGADVSVLLTYATE-EPGALQSGHYVWPAAPALCEYLESHRELIPGGNVVELGAGCGLTGLAIAQL--RPDATVIFTDHDPGVL-KVIEHNAGQQERVQAACLTQS--LRWGPDGAAEVAALEKLQSQANKLCTT-----------------------------------------------------DLIVGSDVIYAREVVPLLFWTVDRLLT-------RDPHGVFLMCSSFGYDDETEKEIDVQSAKYALNREIVRCTLNEKG 248          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: D7G3C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C3_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.800e-25
Identity = 99/259 (38.22%), Postives = 129/259 (49.81%), Query Frame = 2
Query:  131 IAFIFGSDLPRKTSKFMFANVEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGD-ILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAEQ--------SARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTP---------------------VSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALL 817
            + F+F + LP+    F F ++ V V + DD DPGA+QSG Y+WPAA AL+AY+V     LP G   LELGAG GL GL AAQL     A + TDHDPGV+  +RE+  EQ        SA  AK+  V    LSWG V  A RA+L  A+++   ++TP                      SRSG G+GS AG +       G      G               S      F L++ SD++Y +SVV+ LF TV  LL
Sbjct:    6 VGFMFDNALPKTRRSFRFGDISVAVRLVDD-DPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLP-LTKAVVFTDHDPGVLDMIRESIEEQQQQPELGGSAAAAKSRCVQ---LSWGTVGNAQRASLAHALSSVAASSTPRPRRDEALVRTRNLAEEVGGSTSRSGPGRGSGAGLS------RGRIDGARGXXXXXXXXXXXXXXXSGGGGVLFDLVIASDVIYSVSVVEPLFLTVGELL 253          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: A0A6H5KXF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 5.680e-22
Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = 2
Query:  140 IFGSDLPRKTSKFMFANVEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDDLPHGD-ILELGAGVGLVGLAAAQLQNRNNATLVTDHDPGVVARLREAGAEQ--------SARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTP 580
            +F + LP+    F F ++ V V + DD DPGA+QSG Y+WPAA AL+AY+V     LP G   LELGAG GL GL AAQL     A + TDHDPGV+  +RE+  EQ        SA  AK+  V    LSWG V  A RA+L +A+++   ++ P
Sbjct:    1 MFDNALPKTRRSFRFGDISVAVRLVDD-DPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLP-LTTAVVFTDHDPGVLDMIRESIEEQQQQPELGGSAAAAKSRCVQ---LSWGSVGNAQRASLANALSSVAASSPP 151          
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Match: B5Y4W0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4W0_PHATC)

HSP 1 Score: 100 bits (248), Expect = 2.840e-20
Identity = 102/329 (31.00%), Postives = 134/329 (40.73%), Query Frame = 2
Query:  122 DLGIAFIFGSDLPRKTSKFMFAN-----VEVNVSIADDGDPGALQSGSYLWPAAVALAAYVVRCWDD-LPHGDILELGAGVGLVGLAAAQL-QNRNNATLVTDHDPGVVARLR----------------EAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMAAAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSXXGNGNRGIDDSGTPSSGGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLPTFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGGGGRGCDGSSGGYKLQQFYRAR 1039
            D+G  F+F    P    +F F       V+V V + DD DPGA+QSG YLWPAA  LA Y+V      +P   +LELGAG  L  L A Q  Q      +VTDHDPG + R R                E   EQ+     +  V     SWG       A L + +       +P                                                    F LILGSDL+YD +VV+ LFTTV  L+A     T++     FL+ QSF Y++  E +I   C  FGL RT+++D           DG  G  ++Q+F R R
Sbjct:   50 DMG--FMFEGSQPTSIRRFQFPKRDGSAVQVVVRVVDD-DPGAVQSGHYLWPAAQLLAEYMVSLPPPAVPVISVLELGAGCALAALTALQCWQPTLQCVVVTDHDPGTLQRARDNHESTIESIMDAATSEESLEQTINSLASIPVEFREYSWGTDPAPLTAVLGEHVNVKACDPSPT--------------------------------------------------WFDLILGSDLIYDTAVVEPLFTTVAPLMA----RTSR-----FLLSQSFVYETVTEEEIQRVCELFGLTRTILLD-----------DGQ-GERRIQEFTRGR 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7461.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CF84_9STRA1.260e-3435.92Putative methyltransferase-domain-containing prote... [more]
W4G5T8_9STRA1.620e-3034.90Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A6G0XQM1_9STRA9.110e-3032.67Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A425CHD3_9STRA2.860e-2834.49Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A024UA67_9STRA3.300e-2832.89Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A485LRQ2_9STRA1.230e-2632.12Aste57867_24672 protein n=1 Tax=Aphanomyces stella... [more]
A0A662XQW1_9STRA9.610e-2634.51Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D7G3C3_ECTSI2.800e-2538.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXF9_9PHAE5.680e-2245.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5Y4W0_PHATC2.840e-2031.00Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7461contigP-wetherbeei_contig7461:444..1782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog42099.EPrPV00000013537
PFAMsMethyltransf_16
Model size1131
Max annot lvl2759|Eukaryota
KEGG koko:K21804
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.97e-31
EggNOG OGs28K01@1|root,2QSEH@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-21_002800.1
DescriptionLysine methyltransferase
Cds size966
COG categoryS
BRITEko00000,ko01000,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186982.9667773-UTR-P-wetherbeei_contig7461:443..5491683186982.9667773-UTR-P-wetherbeei_contig7461:443..549Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7461 444..549 +
1683186982.9922495-UTR-P-wetherbeei_contig7461:1723..17821683186982.9922495-UTR-P-wetherbeei_contig7461:1723..1782Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7461 1724..1782 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186982.976269-CDS-P-wetherbeei_contig7461:549..7731683186982.976269-CDS-P-wetherbeei_contig7461:549..773Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7461 550..773 +
1683186982.9841642-CDS-P-wetherbeei_contig7461:981..17231683186982.9841642-CDS-P-wetherbeei_contig7461:981..1723Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7461 982..1723 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7461.1.5prot_P-wetherbeei_contig7461.1.5Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7461 550..1723 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7461.1.5

>prot_P-wetherbeei_contig7461.1.5 ID=prot_P-wetherbeei_contig7461.1.5|Name=mRNA_P-wetherbeei_contig7461.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=322bp
MGDDEDLGIAFIFGSDLPRKTSKFMFANVEVNVSIADDGDPGALQSGSYL
WPAAVALAAYVVRCWDDLPHGDILELGAGVGLVGLAAAQLQNRNNATLVT
DHDPGVVARLREAGAEQSARVAKAAAVSAALLSWGPVDTAARANLLDAMA
AAGVATTPVSRSGNGQGSSAGDAGCDSGGHGSSAGGNGNRGIDDSGTPSS
GGTSDKEAPRFPLILGSDLLYDLSVVDLLFTTVDALLAWPVSETAQAPLP
TFLMCQSFAYDSALETKIDGCCSRFGLRRTVVVDTLSSGGGGRGCDGSSG
GYKLQQFYRARLGEGDNRGVS*
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mRNA from alignment at P-wetherbeei_contig7461:444..1782+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7461.1.5 ID=mRNA_P-wetherbeei_contig7461.1.5|Name=mRNA_P-wetherbeei_contig7461.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1339bp|location=Sequence derived from alignment at P-wetherbeei_contig7461:444..1782+ (Phaeothamnion wetherbeei SAG_119_79)
GAGAAGACGAAAGCCCAAGGAAAGAAGAACACAGTCATTGCGGCACCTGG CAATCCTAGCGGCAACGACCAAGAAGTAAGTGTGTTATACAGGCTTCTTC TCGCTTATGGGGGACGACGAGGATCTGGGCATTGCGTTCATCTTTGGCTC TGATTTGCCAAGGAAAACGTCGAAGTTTATGTTTGCTAATGTCGAAGTCA ATGTCTCAATCGCGGATGACGGTGATCCCGGAGCGCTGCAGAGCGGCAGC TACCTCTGGCCGGCTGCCGTTGCTCTTGCTGCGTACGTTGTGCGATGCTG GGACGACTTGCCGCACGGCGATATCCTGGAGTAAGTTTCGACCTCCCGTA GGCGTCTCTAATCTGTCTGCTGCGGCCTATTGAAAAACGCTGTTCCGCTG GAGCTTGGGCTTCACTTCTCTTTCCTGCGGGGATAGTATTCCTTTTTGTG TAAGTTCTAGGGCGTTCCGCGTTTCCTTACAGCTATAACTAAGGCATTGA TGCCTCTGCCTTCTCCGCTTTCTGGTGCCTGTGGTCAGGCTGGGGGCCGG TGTCGGCTTGGTAGGGCTGGCGGCAGCGCAGCTGCAAAACAGAAACAACG CCACGCTCGTGACCGATCACGATCCCGGAGTCGTGGCACGGCTGCGGGAA GCTGGTGCGGAGCAATCCGCTCGCGTTGCAAAGGCCGCCGCGGTCAGCGC CGCTCTGCTGTCCTGGGGACCCGTCGACACTGCTGCCCGTGCCAACCTGC TGGACGCGATGGCTGCTGCGGGCGTCGCAACAACCCCCGTCAGCAGGTCC GGCAATGGCCAGGGCAGTAGCGCAGGCGACGCCGGATGTGATAGCGGCGG CCATGGCAGTAGCGCTGGGGGAAACGGGAATCGCGGCATTGATGACAGCG GCACGCCGTCTTCGGGAGGCACATCGGACAAGGAAGCGCCCAGATTTCCG CTTATTTTGGGAAGCGACTTGCTCTACGATCTCTCGGTTGTCGACCTGCT TTTTACAACAGTCGACGCGCTGCTGGCCTGGCCGGTGTCAGAAACGGCGC AGGCGCCGCTGCCGACATTCCTCATGTGCCAGAGCTTTGCCTACGATAGC GCTTTGGAGACTAAGATTGACGGCTGCTGCAGCCGGTTTGGGCTGCGCCG GACTGTCGTTGTGGACACGCTCTCGTCTGGCGGCGGCGGCAGGGGCTGTG ATGGCAGCAGCGGCGGTTATAAGCTGCAACAGTTCTATCGAGCACGGCTT GGTGAAGGTGATAATCGTGGAGTCTCATGACGTTTTCACTGCCAGAAATC TGACGGGACGGCATTCTTATCCTTTGGAATAATCTTTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7461:444..1782+

>mRNA_P-wetherbeei_contig7461.1.5 ID=mRNA_P-wetherbeei_contig7461.1.5|Name=mRNA_P-wetherbeei_contig7461.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=966bp|location=Sequence derived from alignment at P-wetherbeei_contig7461:444..1782+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGGACGACGAGGATCTGGGCATTGCGTTCATCTTTGGCTCTGATTT
GCCAAGGAAAACGTCGAAGTTTATGTTTGCTAATGTCGAAGTCAATGTCT
CAATCGCGGATGACGGTGATCCCGGAGCGCTGCAGAGCGGCAGCTACCTC
TGGCCGGCTGCCGTTGCTCTTGCTGCGTACGTTGTGCGATGCTGGGACGA
CTTGCCGCACGGCGATATCCTGGAGCTGGGGGCCGGTGTCGGCTTGGTAG
GGCTGGCGGCAGCGCAGCTGCAAAACAGAAACAACGCCACGCTCGTGACC
GATCACGATCCCGGAGTCGTGGCACGGCTGCGGGAAGCTGGTGCGGAGCA
ATCCGCTCGCGTTGCAAAGGCCGCCGCGGTCAGCGCCGCTCTGCTGTCCT
GGGGACCCGTCGACACTGCTGCCCGTGCCAACCTGCTGGACGCGATGGCT
GCTGCGGGCGTCGCAACAACCCCCGTCAGCAGGTCCGGCAATGGCCAGGG
CAGTAGCGCAGGCGACGCCGGATGTGATAGCGGCGGCCATGGCAGTAGCG
CTGGGGGAAACGGGAATCGCGGCATTGATGACAGCGGCACGCCGTCTTCG
GGAGGCACATCGGACAAGGAAGCGCCCAGATTTCCGCTTATTTTGGGAAG
CGACTTGCTCTACGATCTCTCGGTTGTCGACCTGCTTTTTACAACAGTCG
ACGCGCTGCTGGCCTGGCCGGTGTCAGAAACGGCGCAGGCGCCGCTGCCG
ACATTCCTCATGTGCCAGAGCTTTGCCTACGATAGCGCTTTGGAGACTAA
GATTGACGGCTGCTGCAGCCGGTTTGGGCTGCGCCGGACTGTCGTTGTGG
ACACGCTCTCGTCTGGCGGCGGCGGCAGGGGCTGTGATGGCAGCAGCGGC
GGTTATAAGCTGCAACAGTTCTATCGAGCACGGCTTGGTGAAGGTGATAA
TCGTGGAGTCTCATGA
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