mRNA_P-wetherbeei_contig744.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig744.7.1
Unique NamemRNA_P-wetherbeei_contig744.7.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A3D3UJ72_9PROT (Immunogenic protein n=7 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UJ72_9PROT)

HSP 1 Score: 267 bits (683), Expect = 1.870e-84
Identity = 145/289 (50.17%), Postives = 194/289 (67.13%), Query Frame = 1
Query:   94 SPREEA-QDANYFHIGAASAGGVYFSVGEALAALISRPPGAES-CDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGHPQAA 954
            +P+E   +  +YF I  AS  G Y+ +G+ LAALIS P  AES C    PCGV G+VG+AEVS+GSV NL AVN G+I+S LAQ DLV   VRGV      +R+R VRA+ANLY E FH +V  +SGI   S + GKR+S+ ++GSGS    M +L ++GL+  DV +V E PG++A++LAA +LDA+ +VGGYPA  + +   A  VRL+PL    I+QM++ NR L A +IPAG Y      +PTI+V+AQW+VN  +DEE +YQ+TRALWDERN       H +AA
Sbjct:   28 APQEAGPRQISYFRIATASPSGTYYPIGQLLAALISGP--AESYCGEGGPCGVPGVVGLAEVSEGSVANLRAVNAGRIESGLAQGDLVDWAVRGVGSFAGEQRMRGVRAVANLYSEPFHLIVAADSGIQQVSDLAGKRLSIDQKGSGSFVEGMALLSAFGLTPRDVELVYEPPGKAAELLAANRLDAIFFVGGYPAASIAELARAQPVRLVPLQGPEIDQMMRDNRFLTADIIPAGIYISEQNAIPTISVSAQWVVNVGLDEERVYQVTRALWDERNRAAWDGAHARAA 314          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A1Z9SHV9_9PROT (Immunogenic protein n=1 Tax=Rhodospirillaceae bacterium TMED256 TaxID=1986865 RepID=A0A1Z9SHV9_9PROT)

HSP 1 Score: 222 bits (566), Expect = 4.070e-67
Identity = 120/286 (41.96%), Postives = 172/286 (60.14%), Query Frame = 1
Query:   88 SLSPREEAQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGL-SLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGH 942
            S++   +AQDA +F IG    GG Y+ +G  +A+ IS PPG+ SCD    CGV GLV IA+ S GSV N+ AV  G++ S  AQ+D+ Y    G     + E  +++RAIANLYPE  H +V  ++G+     +KG+R+SL  +GSG+ A A ++L ++GL    D+ +   +   +A  LAAG+LDA + V GYP   +  AF     ++LPL    IEQ+L   +      IP+  Y G  E +PTI+VNA WIV  A DEE IYQIT+A+W+E++  +L  GH
Sbjct:   17 SVTVAVKAQDARFFRIGTGGIGGTYYPIGGIIASAISSPPGSRSCDEGGSCGVQGLVAIAQTSGGSVANVEAVAKGRLDSGFAQSDIAYWAYTGTGTYRKKEPRKTIRAIANLYPESVHVVVRTKTGVKSMRDLKGRRVSLNEKGSGALADARLILNAFGLRERRDLKVQYLNSESAALRLAAGKLDAFIAVAGYPMASVQLAFGKSDAQILPLIGKPIEQLLAKYKFFSRDTIPSDVY-GNAEPIPTISVNALWIVPEAADEELIYQITKAIWNEKSRKLLNEGH 301          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A845MK94_9PROT (TAXI family TRAP transporter solute-binding subunit n=1 Tax=Sneathiella chungangensis TaxID=1418234 RepID=A0A845MK94_9PROT)

HSP 1 Score: 215 bits (548), Expect = 2.950e-64
Identity = 107/278 (38.49%), Postives = 170/278 (61.15%), Query Frame = 1
Query:  109 AQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGH 942
            AQ  ++  IG  S  G Y+ +G  LA++IS PPG+ +C++   CGV GL+  A+ + GSV N+  V+ G  ++ALAQ+D+V     G     + + ++S+R IANLYPED H +V  ++GI     +KGKR+S+   GSG+R  A  +L++YGLS +D++ +   P ++  ++ A +LDA   V GYP   + +    GK+ LLP++  +I+  +  +     S IP G YAG+   +PT+AV+ QWIV++   E+ +Y IT+ALW+ RN  +L  GH
Sbjct:   37 AQQISFLRIGTGSTAGTYYPIGTLLASVISNPPGSRACESGGSCGVPGLIATAQTTHGSVDNISGVSKGVFETALAQSDVVAAAFNGTGIYAKKKPVKSLRVIANLYPEDVHLVVRHDAGIKNVKDLKGKRVSIDVPGSGTRENAKQILRAYGLSTKDIDAITAVPDKAVSLMLADKLDAFFIVAGYPVTAVSELADVGKIDLLPISGKIIDDFVAKHGYYSVSDIPEGTYAGVGA-IPTLAVSTQWIVDADTPEDLVYAITQALWNNRNRHLLDRGH 313          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A317PJB9_9HYPH (Uncharacterized protein n=1 Tax=Hoeflea marina TaxID=274592 RepID=A0A317PJB9_9HYPH)

HSP 1 Score: 213 bits (543), Expect = 1.360e-63
Identity = 112/286 (39.16%), Postives = 169/286 (59.09%), Query Frame = 1
Query:   85 ASLSPREEAQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGH 942
            A L    +AQ+ N+F IG    GG YF +G A+A  IS PPG+ +CD    CGV GLV IA+ S GSV N+  + +G + S  +Q+D+ Y    G         +  +RAIA LYPE  H + +  SGI+  + +KGKR+SL   GSG+   A ++L+++G+S  DV +    PG ++D +  GQLDA+ +VGGYPA  L++  ++  V L+P++ + ++ ML          IPA  Y G+ E   T+AV AQW+ ++   +E +Y IT+ALW+E   ++L AGH
Sbjct:   23 AGLGASSQAQEMNFFTIGTGGTGGTYFPLGGAIANAISNPPGSRACDEGGSCGVPGLVAIAQSSRGSVANVNGIKSGILSSGFSQSDVAYWAYSGTGTFDGQAPMEELRAIAALYPEHIHLIASKASGITSVADLKGKRVSLDEPGSGTYVDAKIILEAFGMSESDVTVENLKPGPASDAIRNGQLDALFFVGGYPAGTLVELASSADVVLVPISGSEVDAMLAKYSFFSKDTIPADVYKGVPE-AETVAVGAQWLTSTKQSDELVYGITKALWNESTRSLLDAGH 307          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: UPI001A8F91C5 (TAXI family TRAP transporter solute-binding subunit n=1 Tax=Sneathiella sedimenti TaxID=2816034 RepID=UPI001A8F91C5)

HSP 1 Score: 213 bits (542), Expect = 2.330e-63
Identity = 111/278 (39.93%), Postives = 164/278 (58.99%), Query Frame = 1
Query:  109 AQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGH 942
            AQ+  +  IG  S+ G Y+ +G  LA++IS PPG+  CD    CGV GL+  A+ + GS+ N+  V  G   +ALAQ+D +     G     + + ++S+R IANLYPED H +V   +GI   + +KGKR+S+   GSG+R  A  +L +YGLS++D   V  +P +S  ++ A +LDA   V GYP   + +    GK+ LLP++    ++ +  +     S IPAG Y  L + VPT+AV+ QWIV+  V EE +Y+ITRALW  RN  +L  GH
Sbjct:   37 AQNIYFLRIGTGSSSGTYYPIGTLLASVISNPPGSRDCDDGGSCGVPGLIATAQTTHGSIENINGVTKGYFDTALAQSDTIAAAYNGTGVFAKKKPVKSLRVIANLYPEDVHLVVRRGAGIKNIADLKGKRVSIDVPGSGTRENAKEILAAYGLSVKDFEAVAANPDKSVTLMNADKLDAFFLVAGYPVTAVSELADVGKIELLPISGENAKKFVDNHGYYSVSQIPAGTYQDL-DTVPTLAVSTQWIVSEHVSEEVVYEITRALWHPRNRHLLDRGH 313          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A2D8HH06_9PROT (Immunogenic protein n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2D8HH06_9PROT)

HSP 1 Score: 212 bits (540), Expect = 3.400e-63
Identity = 103/278 (37.05%), Postives = 171/278 (61.51%), Query Frame = 1
Query:  109 AQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGH 942
            AQ+ ++  IG  S  G Y+ +G  +A++IS PPG+ +C+    CGV GL+  A+ + GSV N+  V++G  ++ALAQ+D++     G     + + + ++R IANLYPED H +V  ++GI   + +KGKR+S+  EGSG+R  A+ +L +YGL L+++  V   P ++  M+  G+LDA  +V GYPA  + +      V L+P+   V+E++++       S IPAG Y  + +  PT+AV+ QWI++    +E +Y++T+ALW+ RN  +L  GH
Sbjct:   26 AQNISFLRIGTGSTAGTYYPIGTLIASVISSPPGSRACEDGGSCGVPGLIATAQTTHGSVDNINGVSHGLFETALAQSDIIAAAYNGTGIYAKKKPVGNIRVIANLYPEDIHLVVRTDAGIRTVADLKGKRVSIDSEGSGTRVNALEILNAYGLRLKNIKAVMAGPNKAVTMMLNGELDAFFFVAGYPAAAVSELADLEIVDLVPIGGKVVEKLVEKTGYYSLSHIPAGTYRNI-DATPTLAVSTQWIISEHASDELVYELTKALWNPRNRHLLDRGH 302          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A839SWQ6_9HYPH (Uncharacterized protein n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SWQ6_9HYPH)

HSP 1 Score: 211 bits (538), Expect = 2.220e-62
Identity = 118/317 (37.22%), Postives = 176/317 (55.52%), Query Frame = 1
Query:    4 PGNSRSRITAALLIMIMLAGFGGWLGGASLSPREEAQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGHPQAA 954
            PGN     T AL + ++L      +G  S     +AQD  +F IG  S  G YF +G  +AA +S PPG+ +C     CGV+GL+ +A+ ++GSV N+ A+  G+I+S  +Q+D+ Y                 +RAIANLYPE  H +V+  + +   S +KGKRISL REGSG+R   ++VL++YGL   D+  +   PG +AD LA G++D    V G PA  +    A  ++ L+P+     E++LK         I  G Y  +   V TI+V AQW+V+S V ++ +YQ+T+ALW E    +L  GHP+ A
Sbjct:    7 PGNRSISATRALSLSLLLI-----IGAVS---SGKAQDIEFFRIGTGSTSGTYFPIGGLIAAAMSNPPGSRTCGEGGSCGVSGLIAVAQSTNGSVANVKAIQKGEIESGFSQSDVAYWAYNAQQEFAESGPADKLRAIANLYPESLHLVVSESAAVFTPSQLKGKRISLDREGSGTRVDTLLVLEAYGLKESDMEALALPPGVAADRLALGEIDGFFLVAGTPAEAVTQLAATSRIGLVPITGEPAEKLLKAYPFFSQDFISPGTYPNVGA-VETISVGAQWLVSSDVSDDLVYQLTKALWHENTKRLLGGGHPKGA 314          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A2E4XW41_9PROT (Immunogenic protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XW41_9PROT)

HSP 1 Score: 208 bits (530), Expect = 6.390e-62
Identity = 114/285 (40.00%), Postives = 164/285 (57.54%), Query Frame = 1
Query:   91 LSPREEAQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGL-SLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGH 942
            +SP   A +   F IG    GG Y+ +G  +A+ IS PPGA  CD    CGV GLV IA+ SDGSV N+ AV NG  +S   Q+D+ +    G     + +  +S+RAIANLYPE FH +V   S I     +KG+R+SL  +G+G+   A +VL+++GL    D          ++  L AG+LDA + V GYP   ++ A   G  RLL L+   ++ ++K ++     +I  GAY G +  +PT++VNA WI N  VDEE +YQIT+ALW+E +  +L  GH
Sbjct:    1 MSPLAYADEPRIFRIGTGGIGGTYYPIGGIIASAISSPPGARPCDKGGSCGVPGLVAIAQTSDGSVANVEAVANGSFESGFVQSDIAHWAYSGTGTFRKRKAQKSIRAIANLYPESFHVVVRDGSKIGAIRDLKGRRVSLDEKGAGALVDARLVLRAFGLRERRDFKPRYLKGDVASAQLVAGKLDAFIIVAGYPVPSVVHAVEKGNARLLHLSGKPVDALVKKHKYFSRDMISVGAY-GNSAPIPTVSVNALWIANETVDEELVYQITKALWNENSRKLLDEGH 284          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: A0A843RKN4_9PROT (TAXI family TRAP transporter solute-binding subunit n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKN4_9PROT)

HSP 1 Score: 208 bits (530), Expect = 1.410e-61
Identity = 116/311 (37.30%), Postives = 178/311 (57.23%), Query Frame = 1
Query:   16 RSRITAALLIMIMLAGFGGWLGGASLSPREEAQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGHPQ 948
            R R+ AALL+ +++      LG A ++    AQ  ++F IG  S  G YF VG  +A+ IS PPG+  C     CGV+GLV +A+ + GSV N+  +  G ++S   Q+D+ Y   RG      G  L+S+RAIANL+PE  H +V  + GI   + IKGKRIS+ R GSG+R  A +VL+++G+   D  +     G +AD +  G++D   +V G PA  +++      + L+P+    I++ML+         +PAG Y G+   + T++V AQW+V+ +V EET+Y +TRALW      +L  GHP+
Sbjct:   15 RYRLLAALLLPLVVV-----LGTAGVA----AQGISFFRIGTGSTAGTYFPVGGIIASAISSPPGSRDCGGGGSCGVSGLVAVAQSTRGSVDNVRQIEEGILESGFCQSDIAYWASRGEELFLTGGPLKSLRAIANLFPETIHLVVRTDVGIETVADIKGKRISVDRPGSGTRVDAQLVLEAFGIEEADFEVFSLGSGAAADAMREGEIDGFFFVAGTPATAVLELAEGALIDLIPIVGPEIDKMLEEVPFFARQALPAGTYPGVAA-IDTLSVGAQWVVSESVPEETVYAVTRALWHPTTRQLLDGGHPK 315          
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Match: UPI000B17A970 (TAXI family TRAP transporter solute-binding subunit n=1 Tax=Sneathiella glossodoripedis TaxID=418853 RepID=UPI000B17A970)

HSP 1 Score: 207 bits (526), Expect = 1.900e-61
Identity = 106/283 (37.46%), Postives = 169/283 (59.72%), Query Frame = 1
Query:  103 EEAQDANYFHIGAASAGGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLVAVNNGQIQSALAQADLVYGMVRGVTPLGRGERL-RSVRAIANLYPEDFHFLVNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQEDPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQMLKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRALWDERNHTILLAGHPQ 948
              ++D  +F IG  S+ G YF +G  + + I+ PPG+  CD    CGV GL+  A+ + GSV N+  V  GQ++SALAQ+D++Y    G     R   L +S+R IANLYPED H +V   + I   + +KGKR+S+   GSG+R  A  +L++YG++ +D + +  +  ++ ++L +G+LDA  ++ GYP   + +  ++G + LLP+     E+++ L      S IP G Y G+ E VPT+AV+ QW+V + + +E  Y IT ALW  R+  IL +G P+
Sbjct:   26 SSSEDITFFRIGTGSSSGTYFPIGTLIGSTITGPPGSRPCDDGGSCGVPGLIAAAQTTRGSVANIRGVLQGQLESALAQSDIIYAAYYGTGVFERQADLGKSLRVIANLYPEDVHLIVRKGAQIKTVADLKGKRVSIDLPGSGTRLNARNILRAYGITEKDYHAIDANSDKALNLLRSGELDAFFFIAGYPVNAVAELASSGLIELLPIEGEKAEEVVNLYEFFSLSRIPEGVYEGIGE-VPTLAVSTQWVVKATLSDELAYGITSALWHPRHRAILDSGMPR 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig744.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3UJ72_9PROT1.870e-8450.17Immunogenic protein n=7 Tax=Alphaproteobacteria ba... [more]
A0A1Z9SHV9_9PROT4.070e-6741.96Immunogenic protein n=1 Tax=Rhodospirillaceae bact... [more]
A0A845MK94_9PROT2.950e-6438.49TAXI family TRAP transporter solute-binding subuni... [more]
A0A317PJB9_9HYPH1.360e-6339.16Uncharacterized protein n=1 Tax=Hoeflea marina Tax... [more]
UPI001A8F91C52.330e-6339.93TAXI family TRAP transporter solute-binding subuni... [more]
A0A2D8HH06_9PROT3.400e-6337.05Immunogenic protein n=1 Tax=Sneathiella sp. TaxID=... [more]
A0A839SWQ6_9HYPH2.220e-6237.22Uncharacterized protein n=1 Tax=Limibacillus halop... [more]
A0A2E4XW41_9PROT6.390e-6240.00Immunogenic protein n=1 Tax=Rhodospirillaceae bact... [more]
A0A843RKN4_9PROT1.410e-6137.30TAXI family TRAP transporter solute-binding subuni... [more]
UPI000B17A9701.900e-6137.46TAXI family TRAP transporter solute-binding subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig744contigP-wetherbeei_contig744:7935..8888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1547437.LL06_06810
PFAMsNMT1_3
Model size954
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07080
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.16e-64
EggNOG OGsCOG2358@1|root,COG2358@2|Bacteria,1MXW1@1224|Proteobacteria,2TSK2@28211|Alphaproteobacteria,43I82@69277|Phyllobacteriaceae
DescriptionTRAP transporter solute receptor TAXI family
Cds size954
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186981.6390445-CDS-P-wetherbeei_contig744:7934..88881683186981.6390445-CDS-P-wetherbeei_contig744:7934..8888Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig744 7935..8888 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig744.7.1prot_P-wetherbeei_contig744.7.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig744 7935..8888 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig744.7.1

>prot_P-wetherbeei_contig744.7.1 ID=prot_P-wetherbeei_contig744.7.1|Name=mRNA_P-wetherbeei_contig744.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=318bp
MPGNSRSRITAALLIMIMLAGFGGWLGGASLSPREEAQDANYFHIGAASA
GGVYFSVGEALAALISRPPGAESCDATNPCGVTGLVGIAEVSDGSVGNLV
AVNNGQIQSALAQADLVYGMVRGVTPLGRGERLRSVRAIANLYPEDFHFL
VNVESGISGFSGIKGKRISLGREGSGSRATAMMVLKSYGLSLEDVNIVQE
DPGRSADMLAAGQLDAMLYVGGYPALGLMDAFAAGKVRLLPLNDAVIEQM
LKLNRSLHASVIPAGAYAGLTENVPTIAVNAQWIVNSAVDEETIYQITRA
LWDERNHTILLAGHPQAA
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mRNA from alignment at P-wetherbeei_contig744:7935..8888+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig744.7.1 ID=mRNA_P-wetherbeei_contig744.7.1|Name=mRNA_P-wetherbeei_contig744.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=954bp|location=Sequence derived from alignment at P-wetherbeei_contig744:7935..8888+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAGGTAATTCCCGAAGCCGGATTACAGCCGCCTTGCTTATAATGAT CATGCTGGCAGGATTTGGCGGCTGGCTGGGCGGCGCCAGCCTGTCCCCGC GCGAGGAGGCGCAGGATGCCAATTATTTTCATATTGGCGCGGCGTCGGCG GGGGGGGTCTATTTTTCCGTGGGCGAAGCGCTGGCGGCATTGATCAGCCG ACCGCCCGGGGCGGAATCCTGTGACGCTACTAATCCCTGCGGGGTAACGG GGCTGGTTGGCATTGCAGAGGTCAGCGATGGTTCTGTCGGCAATCTTGTG GCGGTCAATAATGGGCAAATTCAATCCGCACTGGCCCAGGCCGATCTGGT CTATGGCATGGTGCGTGGCGTAACTCCGCTGGGGCGGGGTGAAAGGTTGC GCAGCGTCCGGGCCATTGCCAATCTGTATCCAGAAGATTTTCATTTTCTG GTGAACGTGGAATCCGGCATCAGCGGTTTTTCCGGGATTAAAGGCAAGCG GATTTCACTTGGCCGCGAAGGGTCCGGTTCGCGGGCAACCGCCATGATGG TGCTGAAAAGCTATGGGCTGAGCCTGGAGGATGTAAACATCGTCCAGGAA GACCCCGGACGCTCTGCGGATATGCTGGCGGCAGGCCAGCTGGACGCCAT GCTGTATGTCGGGGGGTATCCGGCGCTTGGCCTTATGGACGCCTTTGCGG CGGGTAAGGTAAGGCTGCTGCCACTCAACGATGCGGTCATTGAACAAATG TTGAAGTTGAACCGTTCTCTGCATGCCAGCGTCATTCCCGCCGGGGCCTA TGCCGGGTTGACGGAAAATGTGCCAACTATTGCGGTAAATGCGCAATGGA TTGTCAATTCGGCCGTAGACGAGGAGACCATCTATCAGATAACCCGCGCG TTGTGGGACGAACGGAACCATACTATTTTGCTGGCCGGGCACCCGCAGGC CGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig744:7935..8888+

>mRNA_P-wetherbeei_contig744.7.1 ID=mRNA_P-wetherbeei_contig744.7.1|Name=mRNA_P-wetherbeei_contig744.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=954bp|location=Sequence derived from alignment at P-wetherbeei_contig744:7935..8888+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAGGTAATTCCCGAAGCCGGATTACAGCCGCCTTGCTTATAATGAT
CATGCTGGCAGGATTTGGCGGCTGGCTGGGCGGCGCCAGCCTGTCCCCGC
GCGAGGAGGCGCAGGATGCCAATTATTTTCATATTGGCGCGGCGTCGGCG
GGGGGGGTCTATTTTTCCGTGGGCGAAGCGCTGGCGGCATTGATCAGCCG
ACCGCCCGGGGCGGAATCCTGTGACGCTACTAATCCCTGCGGGGTAACGG
GGCTGGTTGGCATTGCAGAGGTCAGCGATGGTTCTGTCGGCAATCTTGTG
GCGGTCAATAATGGGCAAATTCAATCCGCACTGGCCCAGGCCGATCTGGT
CTATGGCATGGTGCGTGGCGTAACTCCGCTGGGGCGGGGTGAAAGGTTGC
GCAGCGTCCGGGCCATTGCCAATCTGTATCCAGAAGATTTTCATTTTCTG
GTGAACGTGGAATCCGGCATCAGCGGTTTTTCCGGGATTAAAGGCAAGCG
GATTTCACTTGGCCGCGAAGGGTCCGGTTCGCGGGCAACCGCCATGATGG
TGCTGAAAAGCTATGGGCTGAGCCTGGAGGATGTAAACATCGTCCAGGAA
GACCCCGGACGCTCTGCGGATATGCTGGCGGCAGGCCAGCTGGACGCCAT
GCTGTATGTCGGGGGGTATCCGGCGCTTGGCCTTATGGACGCCTTTGCGG
CGGGTAAGGTAAGGCTGCTGCCACTCAACGATGCGGTCATTGAACAAATG
TTGAAGTTGAACCGTTCTCTGCATGCCAGCGTCATTCCCGCCGGGGCCTA
TGCCGGGTTGACGGAAAATGTGCCAACTATTGCGGTAAATGCGCAATGGA
TTGTCAATTCGGCCGTAGACGAGGAGACCATCTATCAGATAACCCGCGCG
TTGTGGGACGAACGGAACCATACTATTTTGCTGGCCGGGCACCCGCAGGC
CGCC
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