mRNA_P-wetherbeei_contig744.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig744.1.1
Unique NamemRNA_P-wetherbeei_contig744.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A3C0TTN7_9PROT (Pilus assembly protein CpaC (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TTN7_9PROT)

HSP 1 Score: 663 bits (1710), Expect = 1.410e-235
Identity = 349/480 (72.71%), Postives = 401/480 (83.54%), Query Frame = 1
Query:    1 MKFDDSQVRIIADDPESEAVSKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRLLN-------------AASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKRAPSPDTALQGPYGFIME 1401
            MK   SQVRIIADDPE+ +VS+Q++LE+GKAAIVELPRDARDILVSDP VADARIRTPRQIYVIGMA+GATN++FFDE G QILNLE+LVQLDAKGATAAL+RHFP SNL+ E+LNNNLAISGRVPN AASD+A AIVRRFV+ DE+VVNLL+VEGDDQVLLKVRV+E+QR ++KQ+G+DLFG F+ GG   +    T+NQF++AGN +GGL   G++ +              A +   ++GV++ALER+GL+RVLAEPNLTAVSGESAKFLAGGEFPVP GRDRDGN+TIEFKPFGVGLGFTPVVLSDGRI+LRLSTEVSQISN +++TL +                     VIPGLSVRRAETSVELPSGGSLVIAGLLQN+IQKSIDGIPGLKD+PILG LFRSSDF N+ETELVIIVTPYLV   SE++L LPTDGFTPASDFDTYFLGRL G YKR P+P T+LQGPYGFIME
Sbjct:   44 MKIGRSQVRIIADDPENASVSQQIKLEKGKAAIVELPRDARDILVSDPTVADARIRTPRQIYVIGMAVGATNVVFFDENGQQILNLEMLVQLDAKGATAALQRHFPGSNLRAESLNNNLAISGRVPNPAASDRALAIVRRFVEKDENVVNLLSVEGDDQVLLKVRVSEMQRNVVKQLGVDLFGNFNRGGGSRIRG-GTNNQFSVAGNLLGGLVVGGNKTVGGPGVDPLSPFGAVALTSNSITGVLQALERNGLLRVLAEPNLTAVSGESAKFLAGGEFPVPTGRDRDGNVTIEFKPFGVGLGFTPVVLSDGRISLRLSTEVSQISNEQSITLVN--------------------LVIPGLSVRRAETSVELPSGGSLVIAGLLQNNIQKSIDGIPGLKDLPILGALFRSSDFQNDETELVIIVTPYLVKGTSEEKLVLPTDGFTPASDFDTYFLGRLHGVYKRKPNPATSLQGPYGFIME 502          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A081BBB7_9HYPH (Type II and III secretion system protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BBB7_9HYPH)

HSP 1 Score: 472 bits (1214), Expect = 2.640e-160
Identity = 249/449 (55.46%), Postives = 330/449 (73.50%), Query Frame = 1
Query:   88 KAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGT--GSRLLNAASG------QVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKRAPSPDTA---LQGPYGFIME 1401
            KAAIVELP  ARD+LVS+P V DA +RTP++ Y+IGM  G TN  FFD +GDQILNLE++V+ D K   AALE++ P + + VEA+NN++ +SG VPNA+ S +A+ I  RFV  +++V+N+LA+E  +QV+LKV VAE+QRT+IKQ+GID+  + ++G    +L   T N F++ G ++GGLT T  G     A+ G       ++   ++ALER GL+R LAEP LTA+SGESAKFLAGGEFPVP  RDRDGNIT+EFKPFGVGLGFTPVVLS+GRI++++STEVS++++  A     G  T+TD D     +   PG  IP L VRRAET++ELPSGGSLV+AGL+    +++IDG+PG+KD+P+LGTLFRS D+LNNETELV+IVTPYLV A S D+L LPTDGFTPASD DT  +GRL   Y    +   +   L+GP GF+++
Sbjct:   61 KAAIVELPVAARDVLVSNPAVVDAVVRTPKRTYLIGMETGQTNAFFFDGKGDQILNLEIVVERDVKNLEAALEKYLPSARVTVEAINNHIVLSGSVPNASQSSQAREIAARFVGDEKNVLNMLAIESKEQVMLKVTVAEMQRTLIKQLGIDVTSQVELGDL--LLSWATQNNFSLQGQSLGGLTSTPPGLSPTGASDGGATFDSYLVQLGLQALERAGLLRTLAEPTLTAISGESAKFLAGGEFPVPTSRDRDGNITLEFKPFGVGLGFTPVVLSEGRISMKISTEVSELTSEGAFVSQGG--TVTDEDGN---VIQVPGVTIPALRVRRAETTMELPSGGSLVMAGLISESTRQNIDGVPGVKDVPVLGTLFRSRDYLNNETELVVIVTPYLVDATSRDKLALPTDGFTPASDADTILMGRLNATYGVEGAEGVSEGKLEGPVGFVLD 502          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A2E5BR64_9HYPH (Type II and III secretion system protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BR64_9HYPH)

HSP 1 Score: 466 bits (1199), Expect = 4.590e-158
Identity = 247/465 (53.12%), Postives = 336/465 (72.26%), Query Frame = 1
Query:   13 DSQVRIIADDPESEAVSKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAY--KRAPSPDTALQGPYGFIME 1401
            D+Q+  IA+  +S A S+ + L   KAAI+ELP +ARD+LVS+P + DA +RT R+ Y+IGM +G TN  FF+ERG+QILNLE+ V+ D       L R  P++ ++VEA+NNN+ +SGRVPNA+ S +A+ +  RF   ++ V+N+LA+EG +QV L+V VAE+QRT+IKQ+G+DL  R D G    VL L T N  ++ G ++GGLT + S    A  G  L+G +RALER GL+R LAEPNLTA+SGESA FLAGGEFPVP  +DR+GNI +EFKPFGVGLGF+PVVL +GRI+L++STEVS++SN  +        ++TD +     + S  G  +P L VRRAET+VELPSGGS+V+AGLL    +++IDG+PG+KD+P+LG+LFRS DF +NETELV+IVTPYLV A S D++ LPT G+ PASD DT+ +GRL   Y    A   + +LQGP GF+++
Sbjct:   45 DAQLVRIAEGGDSTA-SRSLVLGLSKAAIIELPVEARDVLVSNPAIVDAVVRTTRRTYLIGMEVGQTNAFFFNERGEQILNLEIRVERDLSSLDEMLSRFLPNARIKVEAVNNNIVLSGRVPNASQSAQARDLAARFXGDEKXVLNMLAIEGKEQVXLRVTVAEMQRTLIKQLGVDLTSRVDFGSL--VLSLATENALSLQGGSLGGLTSSPSGA-PATGGSDLNGALRALERAGLLRTLAEPNLTAISGESASFLAGGEFPVPKSQDRNGNIILEFKPFGVGLGFSPVVLGEGRISLKISTEVSELSNEGSFVFQG--TSVTDANGN---IVSRDGVTVPALRVRRAETTVELPSGGSMVMAGLLSESTKQNIDGVPGIKDVPVLGSLFRSRDFQDNETELVVIVTPYLVDATSRDKIVLPTXGYAPASDLDTFLMGRLNATYGVAGARQVEGSLQGPVGFVVD 500          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A2A5ES18_9HYPH (Type II and III secretion system protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ES18_9HYPH)

HSP 1 Score: 463 bits (1192), Expect = 2.880e-157
Identity = 247/455 (54.29%), Postives = 326/455 (71.65%), Query Frame = 1
Query:   49 SEAVSKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGT--GSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKRA--PSPDTALQGPYGFIME 1401
            S + ++ + L   KAAI+ELP DARDILVS+P + DA IRT R+ Y+IGM +G TN  FF+E+GDQILNLE+ V+ D +     L R  P++ + VEA+NNN+ +SGRVPNA+ + +A+ I  RF    E V+N+LA+EG +QV+L+V VAE+QR++IKQ+G+DL  + D G    +L L T N F++ G+A+GGLT    GS    A  G  +S  +RALER GL+R LAEPNLTA+SGESA FLAGGEFPVP  +DR+GN+ IEFKPFGVGLGFTPVVLS GRI+L++STEVS++SN  A       +++ D      T +   G  +P L VRR ET+VELPSGGS+V+AGLL    +++IDG+PG+KD+P+LG+LFRS DF NNETELV+IVTPYLV A S  +L LPTDGF P SD DT+ +GRL   Y  A   +   +LQGP GF+++
Sbjct:   38 SGSAARSLTLGLNKAAIIELPVDARDILVSNPAIVDAVIRTARRTYIIGMEVGQTNAFFFNEKGDQILNLEIRVERDLRALDEMLSRFLPNARINVEAINNNIVLSGRVPNASQATQAREIAARFAGDPEKVLNMLAIEGREQVMLRVTVAEMQRSLIKQLGVDLASQVDFGSF--LLNLATQNAFSLQGSALGGLTSLPPGSP---ATGGSDVSVALRALERAGLLRTLAEPNLTAISGESASFLAGGEFPVPTSQDRNGNVIIEFKPFGVGLGFTPVVLSGGRISLKISTEVSELSNDGAFVFEG--SSVVDAAGNVVTRE---GVTVPXLRVRRVETTVELPSGGSMVMAGLLSETTKQNIDGVPGIKDLPVLGSLFRSRDFQNNETELVVIVTPYLVDATSRGDLVLPTDGFAPPSDMDTFLMGRLNATYGVAGEAAESGSLQGPVGFVVD 482          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A845Q904_9HYPH (BON domain-containing protein n=2 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845Q904_9HYPH)

HSP 1 Score: 462 bits (1190), Expect = 9.880e-157
Identity = 247/460 (53.70%), Postives = 318/460 (69.13%), Query Frame = 1
Query:   28 IIADDPESEAVSKQVR-LERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAY-KRAPSPDTALQGPYGFIME 1401
            ++  DP  E  + QV  L   KAA+VELP DA D+L+S+P++ADA +R+ R+ Y++GM +G TN  FFD+ G Q+LNLE+ V+ D       L RH P S + VEA+N N+ ++G VPNAAAS KA+ I  RFV   E V+N+LA+EG +QVLLKV +AE+QR++IKQ+GIDL     +G     L L T+N F++ G ++GGL  T  R        ++ G + ALER+GL+R LAEP LTA+SGESA FL GGEFPVP+ RDR+GN+ IEFKPFGVGL FTPVVLSDGRI++++STEVS++S+  A     G AT T     E  +    G  IP L VRRAET+VELPSGGSL +AGLLQ   +++IDG+PG KDIPILG+LFRS D+LN ETELV+IVTPYLV   +E +  LPTD   PASD DT  +GRL G Y   A      LQGP GF++E
Sbjct:   47 VVRVDPGGEGANSQVMTLGLNKAAVVELPVDASDVLISNPEIADAIVRSARRTYLLGMEVGETNAFFFDQAGRQVLNLEIRVERDIDSLLGVLGRHLPSSRIDVEAINENIMLTGIVPNAAASSKARDIAARFVGDPEKVLNMLAIEGKEQVLLKVTIAEMQRSLIKQLGIDLSAITSIGDL--ALRLNTANNFSLQGQSLGGLNTT-PRNFGVGGSDLIDGAVAALERNGLLRTLAEPTLTAISGESANFLVGGEFPVPSDRDRNGNVRIEFKPFGVGLAFTPVVLSDGRISMKISTEVSELSSEGAFVSQGGTATDT-----EGNVVQINGITIPALRVRRAETAVELPSGGSLALAGLLQESTRQNIDGVPGAKDIPILGSLFRSRDYLNAETELVVIVTPYLVDPKNESDFVLPTDDQVPASDIDTILMGRLNGTYGANASDVKKQLQGPVGFVLE 498          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A2N3E774_9PROT (Type II and III secretion system protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E774_9PROT)

HSP 1 Score: 459 bits (1180), Expect = 2.820e-155
Identity = 245/458 (53.49%), Postives = 324/458 (70.74%), Query Frame = 1
Query:   58 VSKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDES-VVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLT-----GTGSRLLNAASGQVLSGV-IRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLT---GAYKRAPSPDTALQGPYGFIME 1401
            VS+ + L   KAAIVELP  ARD+LVS+P + DA +RT ++ Y+IG+A+G TN  FF+ERG QILNLE+ V  D  G   +L ++FP + + VE++N+++ +SG V +A  + KAQ +  R++  D+  V+N+L +EG +QV+LKV VAE+QR +IKQ+G+DL    D G     L L T+N F++ G++ GGLT     G G+   N   G    G  IRALERDG++R LAEPNLTA+SGESAKFLAGGEFPVP  RDRDGN+ +E+KPFGVGL FTPVVLS+GRI+LR+STEVS++S+  A  L              Q   SA G  +PGL VRRAET++ELPSGGSLV+AGLL + +++++DG+PG+KD+P+LG LFRS D+  NETELV+IVTPYLV   S   L LPTDGF PASD DT  +GRL    GA+  AP  DT+LQGP GF+++
Sbjct:   54 VSRSIVLGLNKAAIVELPVAARDVLVSNPAIVDAVVRTNKRTYLIGLAVGQTNAFFFNERGQQILNLEIRVARDLSGLRDSLRQYFPKARIDVESVNDHVVLSGMVASATQASKAQDLAARYIGLDKDHVLNMLGIEGKEQVMLKVTVAEMQRNVIKQLGVDLSTAADFGDF--ALRLATANSFSVQGSSFGGLTTAPATGIGAGTTNYNGGDTTIGAAIRALERDGILRTLAEPNLTAISGESAKFLAGGEFPVPVSRDRDGNVQLEYKPFGVGLNFTPVVLSEGRISLRISTEVSELSSEGAYVL--------------QGATSADGVTVPGLKVRRAETTLELPSGGSLVMAGLLSDTMRQNVDGVPGMKDVPVLGQLFRSRDYQKNETELVVIVTPYLVDPTSRKNLALPTDGFAPASDMDTILMGRLNATYGAHGAAPG-DTSLQGPVGFVVD 494          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A2Z4UQ62_9HYPH (Type II secretion system protein D n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UQ62_9HYPH)

HSP 1 Score: 457 bits (1176), Expect = 1.430e-154
Identity = 242/469 (51.60%), Postives = 333/469 (71.00%), Query Frame = 1
Query:    1 MKFDDSQVRIIADDPESEAVSKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKRAPSP--DTALQGPYGFIME 1401
            M   D+Q+  I +   S A S+ + L   KAAI+ELP DA+D+LVS+P + DA +RT R+ YVIGM IG TN  FF+ RG+QILNLE+ V+ D  G +  + R  P++ + VEA+N+N+ +SG VPNAA + +A+ +  RF+   + ++N+LAVEG++QV L+V VAE+QR++IKQ+G+DL    D+G     L L T+N  ++ G ++GGLT   + L  A  G  ++  + ALER GL+R LAEPNLTA+SGESA FLAGGEFPVP  +DR+GN+ +EFKPFGVGLGFTPVVL +GRI+L++STEVS++++  +        T  + +T  Q      G  +P L VRRAET+VELPSGGS+V+AGLL    +++IDG+PG+KD+P+LG+LFRS DF +NETELV+IVTPYLV A S D++ LPTDG+ PASD DT+ +GRL   Y  A S   D ALQGP GF+++
Sbjct:   42 MAAGDAQLVRITEGGASTA-SRTLTLGLNKAAIIELPVDAKDVLVSNPAIVDAVVRTARRTYVIGMEIGQTNAFFFNARGEQILNLEIRVERDLVGLSGMIARFLPNARVNVEAVNDNIVLSGFVPNAAQATQARDLAARFIGNPDQILNMLAVEGNEQVNLRVTVAEMQRSLIKQLGVDLTSSVDIGSL--ALSLATANALSLQGGSLGGLTSAPNGL-PATGGSDITAALSALERAGLLRTLAEPNLTAISGESASFLAGGEFPVPTSQDRNGNVILEFKPFGVGLGFTPVVLGEGRISLKISTEVSELTSEGSFVFEGTSVTDINGNTIRQD-----GVTVPALRVRRAETTVELPSGGSMVMAGLLSETTKQNIDGVPGIKDVPVLGSLFRSRDFQDNETELVVIVTPYLVDATSRDKIVLPTDGYAPASDLDTFLMGRLNATYGVAGSEGSDGALQGPVGFVVD 501          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: X5MLY6_9HYPH (Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly n=2 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MLY6_9HYPH)

HSP 1 Score: 454 bits (1169), Expect = 3.620e-153
Identity = 246/478 (51.46%), Postives = 325/478 (67.99%), Query Frame = 1
Query:   28 IIADDPESEAVSKQV-RLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRL-----------------LNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKRAPSPDTA--LQGPYGFIME 1401
            ++  DP   + + QV  L   K+A+VELP DA D+L+++P++ADA +R+ R+ Y++GM +G TN  FFD  G Q+LNLE+ V+ D       L RH PD+ + VE +N+NL ++G VPNAAAS KA+ I  RFV  DE V+N+L+++G +QV+LKV +AE+QRT+IKQ+GIDL     +G     L LQT+N F++ G A+GGLT   + +                  N ++G  + G +RALER+GL+R LAEP LTA++GESA FL GGEFPVP+ RD  GN+ IEFKPFGVGL FTPVVLS+GRI+L++STEVS++S+  +  +  G  T +D  T + +     G  IP L VRRAET+VELPSGGSL +AGLLQ   +++IDG+PG KDIPILG+LFRS D+LN ETELV+IVTPYLV    E +  LPTD   PASD +T  LGRL G  K A   D    LQGP GFIME
Sbjct:   56 VVKVDPGGASANSQVLSLGLNKSAVVELPVDASDVLIANPEIADAIVRSARRTYLLGMEVGETNAFFFDAAGRQVLNLEIRVERDIDSLLGMLGRHLPDARISVEPINDNLMLTGVVPNAAASSKAREIAARFVGDDEKVLNMLSIDGKEQVMLKVTIAEMQRTLIKQLGIDLSSISSIGDL--ALRLQTNNAFSVQGRALGGLTSAPTSVRPSTAGGTVFPQSSGISFNDSAGSYVDGALRALERNGLLRTLAEPTLTAITGESANFLVGGEFPVPSDRDNSGNVRIEFKPFGVGLSFTPVVLSEGRISLKISTEVSELSSEGSFVVQGGTVTNSDGTTSQLS-----GITIPALRVRRAETAVELPSGGSLALAGLLQESTRQNIDGVPGAKDIPILGSLFRSRDYLNAETELVVIVTPYLVDPKHESDFVLPTDEHVPASDLETILLGRLNGT-KSAGKKDLKEQLQGPVGFIME 525          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A2E1ELC7_9HYPH (Type II and III secretion system protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1ELC7_9HYPH)

HSP 1 Score: 449 bits (1156), Expect = 8.910e-152
Identity = 236/450 (52.44%), Postives = 319/450 (70.89%), Query Frame = 1
Query:   61 SKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTD-ESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAY-KRAPSP-DTALQGPYGFIME 1401
            S+ + L   KAAIVELP  ARD+LVS+P + DA +RT ++ Y+IG+A+G TN  FF+E G QILNLE+ V  D  G   +L ++FP + + VE++N+++ +SG V +A+ + KAQ +  R++  D E+V+N+L +EG +QV+LKV VAE+QR++IKQ+G+DL      G     L L TSN F++ G ++GGL+  G+    + +G  +   +RALERDG++R LAEPNLTA+SGESAKFLAGGEFPVP  RDRDGN+ +EFKPFGVGL FTPVVLS+GRI+L++STEVS++S+  A  L    +T               G  +PGL VRRAET++ELPSGGSLV+AGLL +  +++IDG+PG KD+P+LG LFRS D+  NETELV+IVTPYLV   S   L LPTDGF PASD DT  +GRL   Y  R  +P D +LQGP GF+++
Sbjct:   57 SRSIVLGLNKAAIVELPVAARDVLVSNPAIVDAVVRTSKRTYLIGLAVGQTNAFFFNESGQQILNLEIRVARDLSGLRDSLRQYFPSARIDVESINDHVVLSGMVASASEASKAQDLAARYIGVDKENVLNMLGIEGKEQVMLKVTVAEMQRSVIKQLGVDLSSAASFGDF--ALRLATSNAFSVQGQSLGGLSTEGT----SYNGDDIGAALRALERDGILRTLAEPNLTAISGESAKFLAGGEFPVPTSRDRDGNVQLEFKPFGVGLNFTPVVLSEGRISLKISTEVSELSSDGAFVLQGSSST---------------GVTVPGLKVRRAETTLELPSGGSLVMAGLLSDTTRQNIDGVPGAKDMPVLGQLFRSRDYQKNETELVVIVTPYLVDPTSRKNLVLPTDGFAPASDMDTILMGRLNATYGARGATPGDKSLQGPVGFVVD 485          
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Match: A0A7Y8MBF7_9PROT (Type II and III secretion system protein family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MBF7_9PROT)

HSP 1 Score: 444 bits (1143), Expect = 8.520e-150
Identity = 239/459 (52.07%), Postives = 322/459 (70.15%), Query Frame = 1
Query:   28 IIADDPESEAVSKQVRLERGKAAIVELPRDARDILVSDPKVADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAALERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVNLLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSNQFNIAGNAIGGLTGTGSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLTAVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRINLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVRRAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFLNNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKRAPSPDTALQG-PYGFIME 1401
            ++  D     ++++++L   KAA++ LP DA DILV+ P+V DA IRTPR  +++G A+G +N  FFD  G QILNL++ V+ D         +  P++ ++ EALNN++ + G VPNA A+++A+ I  RF+D  E VVNLL +E  +QV+L+VRVAE++RT+ KQ+G+DL   FDVG      +L T+N F++ G  +G   G  S + N  +GQ    VI+ALER GL+R LAEP LTAVSGESA+FLAGGEFPVP  RD+DGN+ IEFKPFGVGLGFTPVVL +G I+L++STEVS++SN  A  ++ G + + D   G + L S  G  IP +SVRRA+T+VELPSGGSLV+AGLL+   Q++IDGIP LKD+P+LG LFRS DF  NETELV+IVTPY+V+  S  +LR PTDGF  A+D +T  LGRL G YK    P T + G P GFI++
Sbjct:   37 LVEIDQSDSHMTRELKLGLNKAALIRLPVDAADILVAKPEVVDAVIRTPRTAFILGQAVGQSNAFFFDASGRQILNLDIQVERDVGPLRDLYAKLMPEARIEAEALNNHIVLRGLVPNAVAANQAKEIAARFIDNPEGVVNLLTIEAGEQVMLQVRVAEMRRTVAKQLGLDLRTVFDVGEVN--FDLATANPFSVLGQFLGENDGF-SYVDNVDNGQGAEAVIKALERHGLLRTLAEPTLTAVSGESAEFLAGGEFPVPVARDQDGNVIIEFKPFGVGLGFTPVVLGEGNISLKISTEVSELSNENAF-VSDGGSILID---GTEYLIS--GITIPSISVRRAQTTVELPSGGSLVMAGLLKQQTQQNIDGIPALKDLPVLGALFRSRDFAENETELVVIVTPYIVTPTSASKLRAPTDGFVNATDLETILLGRLNGMYKAPAGPVTKVPGQPVGFILD 486          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig744.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TTN7_9PROT1.410e-23572.71Pilus assembly protein CpaC (Fragment) n=1 Tax=Alp... [more]
A0A081BBB7_9HYPH2.640e-16055.46Type II and III secretion system protein n=1 Tax=T... [more]
A0A2E5BR64_9HYPH4.590e-15853.12Type II and III secretion system protein n=1 Tax=R... [more]
A0A2A5ES18_9HYPH2.880e-15754.29Type II and III secretion system protein n=1 Tax=R... [more]
A0A845Q904_9HYPH9.880e-15753.70BON domain-containing protein n=2 Tax=Pyruvatibact... [more]
A0A2N3E774_9PROT2.820e-15553.49Type II and III secretion system protein n=1 Tax=A... [more]
A0A2Z4UQ62_9HYPH1.430e-15451.60Type II secretion system protein D n=3 Tax=Hyphomi... [more]
X5MLY6_9HYPH3.620e-15351.46Type II/IV secretion system secretin RcpA/CpaC,ass... [more]
A0A2E1ELC7_9HYPH8.910e-15252.44Type II and III secretion system protein n=2 Tax=H... [more]
A0A7Y8MBF7_9PROT8.520e-15052.07Type II and III secretion system protein family pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig744contigP-wetherbeei_contig744:9..1412 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_1834
Preferred namecpaC
PFAMsBON,Secretin,T2SS-T3SS_pil_N
Model size1404
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02280
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.32e-161
EggNOG OGsCOG4964@1|root,COG4964@2|Bacteria,1MV8G@1224|Proteobacteria,2TRNN@28211|Alphaproteobacteria,4BQ1G@82117|unclassified Alphaproteobacteria
DescriptionPilus formation protein N terminal region
Cds size1404
COG categoryU
BRITEko00000,ko02035,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186981.4369175-CDS-P-wetherbeei_contig744:8..14121683186981.4369175-CDS-P-wetherbeei_contig744:8..1412Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig744 9..1412 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig744.1.1prot_P-wetherbeei_contig744.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig744 9..1412 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig744.1.1

>prot_P-wetherbeei_contig744.1.1 ID=prot_P-wetherbeei_contig744.1.1|Name=mRNA_P-wetherbeei_contig744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=468bp
MKFDDSQVRIIADDPESEAVSKQVRLERGKAAIVELPRDARDILVSDPKV
ADARIRTPRQIYVIGMAIGATNLIFFDERGDQILNLELLVQLDAKGATAA
LERHFPDSNLQVEALNNNLAISGRVPNAAASDKAQAIVRRFVDTDESVVN
LLAVEGDDQVLLKVRVAEVQRTIIKQMGIDLFGRFDVGGAKDVLELQTSN
QFNIAGNAIGGLTGTGSRLLNAASGQVLSGVIRALERDGLVRVLAEPNLT
AVSGESAKFLAGGEFPVPAGRDRDGNITIEFKPFGVGLGFTPVVLSDGRI
NLRLSTEVSQISNARAVTLTSGFATITDPDTGEQTLQSAPGTVIPGLSVR
RAETSVELPSGGSLVIAGLLQNDIQKSIDGIPGLKDIPILGTLFRSSDFL
NNETELVIIVTPYLVSAVSEDELRLPTDGFTPASDFDTYFLGRLTGAYKR
APSPDTALQGPYGFIME*
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mRNA from alignment at P-wetherbeei_contig744:9..1412+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig744.1.1 ID=mRNA_P-wetherbeei_contig744.1.1|Name=mRNA_P-wetherbeei_contig744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1404bp|location=Sequence derived from alignment at P-wetherbeei_contig744:9..1412+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTTGATGACAGCCAGGTGCGGATCATTGCCGATGATCCAGAAAG CGAAGCAGTTTCGAAACAGGTCCGGCTGGAACGCGGCAAGGCGGCGATCG TTGAGCTGCCCCGCGATGCGCGCGACATTCTGGTGTCGGATCCCAAGGTT GCCGATGCGCGCATCCGCACCCCCCGGCAGATTTATGTGATTGGCATGGC TATTGGCGCCACCAATCTGATCTTTTTTGATGAACGGGGCGATCAGATTT TAAATCTGGAGCTGCTGGTGCAGCTGGATGCGAAGGGCGCCACCGCAGCG CTGGAGCGCCACTTCCCCGACAGCAATCTGCAGGTTGAGGCGCTGAATAA TAATCTGGCGATCAGCGGCCGGGTTCCCAATGCGGCAGCGTCCGACAAGG CACAGGCAATCGTGCGGCGCTTCGTTGACACGGATGAAAGCGTCGTCAAT CTGCTGGCCGTCGAAGGCGATGATCAGGTGTTGCTGAAAGTGCGGGTGGC GGAAGTACAGCGCACCATCATCAAGCAGATGGGCATTGATCTGTTCGGCC GCTTTGATGTGGGCGGGGCGAAAGACGTGCTGGAACTGCAAACCAGCAAC CAGTTTAACATTGCTGGCAATGCCATTGGCGGGTTGACAGGCACCGGCAG CCGTCTGCTGAACGCTGCCAGCGGCCAGGTATTATCCGGGGTGATCCGGG CGCTGGAACGCGATGGCCTGGTGCGGGTGCTGGCGGAACCCAATCTGACT GCGGTGTCCGGGGAATCGGCGAAATTTCTGGCGGGCGGTGAATTTCCGGT GCCGGCGGGGCGGGATCGTGACGGTAATATCACTATTGAATTCAAGCCCT TTGGCGTTGGCCTTGGCTTTACCCCGGTGGTCTTAAGCGATGGACGTATC AATTTGCGCCTGTCCACAGAAGTCAGCCAGATTTCAAATGCCCGGGCGGT AACCCTTACCAGCGGCTTTGCAACTATCACCGATCCCGACACGGGTGAGC AAACCTTACAAAGCGCGCCGGGTACGGTCATTCCAGGTCTGTCGGTGCGG CGGGCCGAAACTTCTGTCGAACTGCCCAGCGGCGGCAGCCTGGTGATTGC CGGCCTGTTGCAGAATGATATTCAGAAGAGCATCGATGGCATTCCCGGAC TGAAAGACATTCCCATTCTGGGGACGCTTTTCCGCAGCAGCGATTTTCTG AATAATGAAACCGAACTGGTGATTATTGTGACCCCCTATCTGGTCAGCGC GGTGAGCGAAGATGAATTGCGGCTGCCGACCGATGGATTTACGCCGGCCA GCGATTTTGACACTTATTTTCTGGGGCGGTTAACAGGCGCTTATAAGCGC GCCCCATCGCCGGATACGGCATTGCAGGGGCCTTATGGCTTCATCATGGA GTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig744:9..1412+

>mRNA_P-wetherbeei_contig744.1.1 ID=mRNA_P-wetherbeei_contig744.1.1|Name=mRNA_P-wetherbeei_contig744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1404bp|location=Sequence derived from alignment at P-wetherbeei_contig744:9..1412+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTTGATGACAGCCAGGTGCGGATCATTGCCGATGATCCAGAAAG
CGAAGCAGTTTCGAAACAGGTCCGGCTGGAACGCGGCAAGGCGGCGATCG
TTGAGCTGCCCCGCGATGCGCGCGACATTCTGGTGTCGGATCCCAAGGTT
GCCGATGCGCGCATCCGCACCCCCCGGCAGATTTATGTGATTGGCATGGC
TATTGGCGCCACCAATCTGATCTTTTTTGATGAACGGGGCGATCAGATTT
TAAATCTGGAGCTGCTGGTGCAGCTGGATGCGAAGGGCGCCACCGCAGCG
CTGGAGCGCCACTTCCCCGACAGCAATCTGCAGGTTGAGGCGCTGAATAA
TAATCTGGCGATCAGCGGCCGGGTTCCCAATGCGGCAGCGTCCGACAAGG
CACAGGCAATCGTGCGGCGCTTCGTTGACACGGATGAAAGCGTCGTCAAT
CTGCTGGCCGTCGAAGGCGATGATCAGGTGTTGCTGAAAGTGCGGGTGGC
GGAAGTACAGCGCACCATCATCAAGCAGATGGGCATTGATCTGTTCGGCC
GCTTTGATGTGGGCGGGGCGAAAGACGTGCTGGAACTGCAAACCAGCAAC
CAGTTTAACATTGCTGGCAATGCCATTGGCGGGTTGACAGGCACCGGCAG
CCGTCTGCTGAACGCTGCCAGCGGCCAGGTATTATCCGGGGTGATCCGGG
CGCTGGAACGCGATGGCCTGGTGCGGGTGCTGGCGGAACCCAATCTGACT
GCGGTGTCCGGGGAATCGGCGAAATTTCTGGCGGGCGGTGAATTTCCGGT
GCCGGCGGGGCGGGATCGTGACGGTAATATCACTATTGAATTCAAGCCCT
TTGGCGTTGGCCTTGGCTTTACCCCGGTGGTCTTAAGCGATGGACGTATC
AATTTGCGCCTGTCCACAGAAGTCAGCCAGATTTCAAATGCCCGGGCGGT
AACCCTTACCAGCGGCTTTGCAACTATCACCGATCCCGACACGGGTGAGC
AAACCTTACAAAGCGCGCCGGGTACGGTCATTCCAGGTCTGTCGGTGCGG
CGGGCCGAAACTTCTGTCGAACTGCCCAGCGGCGGCAGCCTGGTGATTGC
CGGCCTGTTGCAGAATGATATTCAGAAGAGCATCGATGGCATTCCCGGAC
TGAAAGACATTCCCATTCTGGGGACGCTTTTCCGCAGCAGCGATTTTCTG
AATAATGAAACCGAACTGGTGATTATTGTGACCCCCTATCTGGTCAGCGC
GGTGAGCGAAGATGAATTGCGGCTGCCGACCGATGGATTTACGCCGGCCA
GCGATTTTGACACTTATTTTCTGGGGCGGTTAACAGGCGCTTATAAGCGC
GCCCCATCGCCGGATACGGCATTGCAGGGGCCTTATGGCTTCATCATGGA
GTAA
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