mRNA_P-wetherbeei_contig7429.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.080e-44 Identity = 166/456 (36.40%), Postives = 215/456 (47.15%), Query Frame = 2
Query: 116 GGVVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAE--KSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAA---------------------------------------------------AAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQRRAAPRSGAAXXXIXXXXXXXXEAEVXXXXXXXXXXTAGAAAKVG--VSDAEDTGGGV-------GELCGGGLK--------SGAXXXESGSGGLTSSSSPLGGPD------AAEIAIIRRLIRAAKEADAAAIDAREAAAASTXXXXXXXXXXXERAAAGTEWVYIDRSWAAKWAACATPGPVCNHRLVCRHGRVKPHVTATAAAGGPPLGALFVRVPRPVFELLVAVHGP 1255
GG+VS +G+WLG K VALE CL AFF+ ERLRGA Q+ CDGC K +A KS L+H PE+L LH+KRFRR Y+ SHK++N V FPL LD+ +L+ A + A+A +P P+LYDLVGLVEHTGGL+ GHYT++ RD S W + +D +V+ V+ +PY+L Y+R+ P S A VXXXXXXXXXX+ A+ +G +A D V + GGG + +G+ + + G T + +G P XXXXXXXXXXX WVY+ ++WA KWA A PGPV NH +VCRHGRVKP+V AA V VPR V LV +GP
Sbjct: 478 GGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSVRRGCASPDGXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKR-PSSSWAPGTQAQSMRPGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMTAATNGSTPGAAAAVGATIGAEAVGEPQPRLSIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGGSNSWVYMSKAWALKWATSAYPGPVSNHHVVCRHGRVKPNVGVKRAAKE------MVAVPRGVHRSLVNRYGP 926
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI) HSP 1 Score: 172 bits (437), Expect = 7.310e-41 Identity = 92/224 (41.07%), Postives = 124/224 (55.36%), Query Frame = 2
Query: 116 GGVVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAA---------------------------------------------------AAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQRR 634
GG+VS +G+WLG K VALE CL AFF+ ERLRGA Q+ CDGC K +A+KS L+H PE+L LH+KRFRR Y SHK++N V FPL LD+ +L+ A + A+A +P P+LYDLVGLVEHTGGL+ GHYT++ RD S W++ +D +V+ V+ +PY+L Y+R+
Sbjct: 482 GGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRK 705
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A0D2WG79_CAPO3 (Ubiquitinyl hydrolase 1 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WG79_CAPO3) HSP 1 Score: 140 bits (354), Expect = 1.400e-30 Identity = 75/174 (43.10%), Postives = 100/174 (57.47%), Query Frame = 2
Query: 119 GVVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQRRAA 640
G++S + KPVALE CL+AF TE L G+E++ C+ C DA K+L + PEVLCLHIKRFR ++S KL V FPL+GLDMRP+L P + + LY L +V H GG+ GHY A+ + S RWF D D +V+ V + Y+LFY R +A
Sbjct: 722 GILSHFNPFSSWKPVALEACLSAFCDTEELVGSERYRCEHCNKLCDALKTLSVHVLPEVLCLHIKRFRHDSYLSSKLSQPVQFPLEGLDMRPFLAPGSTETNT---------LYTLNAVVSHRGGVNSGHYVAYAQHPQSGRWFEYDDSDTTEVSVQDVLDQEAYILFYSRESA 886
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A6J1V381_9SAUR (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Elapidae TaxID=8602 RepID=A0A6J1V381_9SAUR) HSP 1 Score: 132 bits (331), Expect = 6.280e-28 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 2
Query: 122 VVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQR 631
VVS V W V L+ CLAAFFA + L+G + C+ C+ + K ++ H PE+LC+H+KRFR S K+ VSFPL+GLD++P+L + A AV YDL+ ++ H G GHYTA+ R+ +NRW+ D+ V +VT + + YVLFY++
Sbjct: 471 VVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQIAV---------YDLLSVICHHGTAINGHYTAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 631
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A670YJI1_PSETE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670YJI1_PSETE) HSP 1 Score: 132 bits (331), Expect = 6.570e-28 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 2
Query: 122 VVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQR 631
VVS V W V L+ CLAAFFA + L+G + C+ C+ + K ++ H PE+LC+H+KRFR S K+ VSFPL+GLD++P+L + A AV YDL+ ++ H G GHYTA+ R+ +NRW+ D+ V +VT + + YVLFY++
Sbjct: 496 VVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQIAV---------YDLLSVICHHGTAINGHYTAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 656
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A0F7Z2A8_CROAD (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Crotalus TaxID=8728 RepID=A0A0F7Z2A8_CROAD) HSP 1 Score: 131 bits (330), Expect = 8.290e-28 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 2
Query: 122 VVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQR 631
VVS V W V L+ CLAAFFA + L+G + C+ C+ + K ++ H PE+LC+H+KRFR S K+ VSFPL+GLD++P+LT + A A+ YDL+ ++ H G GHY A+ R+ +NRW+ D+ V +VT + V YVLFY++
Sbjct: 470 VVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLTKDSPAQIAI---------YDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTVQNAEAYVLFYRK 630
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A6I9YL57_9SAUR (Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Colubroidea TaxID=34989 RepID=A0A6I9YL57_9SAUR) HSP 1 Score: 129 bits (325), Expect = 3.370e-27 Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 2
Query: 122 VVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQR 631
VVS V W V L+ CLAAFFA + L+G + C+ C+ + K ++ H PE+LC+H+KRFR S K+ VSFPL+GLD++P+L + A AV YDL+ ++ H G GHY A+ R+ +NRW+ D+ V +VT + + YVLFY++
Sbjct: 471 VVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQIAV---------YDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 631
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A1D1ZYV0_AUXPR (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZYV0_AUXPR) HSP 1 Score: 129 bits (325), Expect = 3.420e-27 Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 2
Query: 143 WLGLK--PVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVR----DAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQRRAAPRSGAA 658
WLG+K P ++ CL F A E+L GAE F C+ C+AKT A K LRL P++L LHIKRF+ + + KL VS+PL GL + YL+P A A G LYDL + H G L GHYTA R A W+ +D+ V++V+ V + Y+LFY RR PR+ AA
Sbjct: 698 WLGIKGSPASISDCLTVFAADEKLEGAEAFSCEVCKAKTPATKHLRLQRLPQILVLHIKRFKYRGFFTDKLTASVSYPLAGLSLDTYLSPEALVAGEGGA------LYDLYAVSNHYGNLSGGHYTAMCRVQSPQAPEGEWYCFNDDLVNRVSEDQVMSQYAYILFYARR--PRAAAA 867
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A6P9DL03_PANGU (Ubiquitin carboxyl-terminal hydrolase n=6 Tax=Serpentes TaxID=8570 RepID=A0A6P9DL03_PANGU) HSP 1 Score: 129 bits (325), Expect = 3.470e-27 Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 2
Query: 122 VVSMVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWVSHKLYNGVSFPLKGLDMRPYLTPAAAAASAVGEETPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNPYVLFYQR 631
VVS V W V L+ CLAAFFA + L+G + C+ C+ + K ++ H PE+LC+H+KRFR S K+ VSFPL+GLD++P+L + A AV YDL+ ++ H G GHY A+ R+ +NRW+ D+ V +VT + + YVLFY++
Sbjct: 487 VVSCVPSWFWGPTVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQIAV---------YDLLSVICHHGTAINGHYIAYCRNNLNNRWYEFDDQSVTEVTESTIQNAEAYVLFYRK 647
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Match: A0A7S3LR50_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LR50_9STRA) HSP 1 Score: 123 bits (308), Expect = 3.870e-27 Identity = 67/192 (34.90%), Postives = 109/192 (56.77%), Query Frame = 2
Query: 119 GVVSMVGLWLGLK--PVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVHGPEVLCLHIKRFRRLYWV-----SHKLYNGVSFPLKGLDMRPYL-TPAAAAASAVGEE---------TPDPLLYDLVGLVEHTGGLQRGHYTAHVRDAASNRWFYASDEDVHQVTAAAVARRNP--YVLFYQRRA 637
G++SM LG+ + L+ CL AFF++E L G EQ++C+ C++K DA K+ L H PEV+C H+KRF + + S K +S+PLKGLD++PYL P + ++ +E + LYDL +V H GG+ GHY ++ ++ + W+ DE + + A++V + Y+LFY +R+
Sbjct: 94 GMMSMAKSVLGMNGYSLCLDDCLRAFFSSENLEGDEQYYCEKCKSKQDASKAYSLAHLPEVMCFHLKRFNKTNYSGWGLGSQKNSTLISYPLKGLDLKPYLYKPDPSLLNSDDDERNYSNDSCASTSSTLYDLFAVVRHIGGINGGHYISNCKNPVNEEWYEFDDEFIRHLPASSVPSTSSEAYLLFYAKRS 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7429.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7429.1.1 >prot_P-wetherbeei_contig7429.1.1 ID=prot_P-wetherbeei_contig7429.1.1|Name=mRNA_P-wetherbeei_contig7429.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=671bp MVGLWLGLKPVALEGCLAAFFATERLRGAEQFFCDGCRAKTDAEKSLRLVback to top mRNA from alignment at P-wetherbeei_contig7429:99..2745- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7429.1.1 ID=mRNA_P-wetherbeei_contig7429.1.1|Name=mRNA_P-wetherbeei_contig7429.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2647bp|location=Sequence derived from alignment at P-wetherbeei_contig7429:99..2745- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7429:99..2745- >mRNA_P-wetherbeei_contig7429.1.1 ID=mRNA_P-wetherbeei_contig7429.1.1|Name=mRNA_P-wetherbeei_contig7429.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2013bp|location=Sequence derived from alignment at P-wetherbeei_contig7429:99..2745- (Phaeothamnion wetherbeei SAG_119_79)back to top |