prot_P-wetherbeei_contig7403.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7403.1.1
Unique Nameprot_P-wetherbeei_contig7403.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length86
Homology
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BLAST of mRNA_P-wetherbeei_contig7403.1.1 vs. uniprot
Match: A0A835Z3Y3_9STRA (Ribonuclease III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.550e-17
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 0 
Query:    1 MEKSLRRPANERLEMFGDAYLKLSMTLTAYLAEPDLLEEGLMSELRSNLVSNARLLQNARAAGLLPFIHPPRSLLCQPWL-HWLPPL 86
            +E ++RRPANERLE  GDA+LK  M L      P L EEGL+SE RSNLV NARL + A    L+ ++HP RS+L +P+L HW+P L
Sbjct:   53 VEVAVRRPANERLETLGDAWLKAYMCLFIMQTRPILQEEGLISEFRSNLVCNARLTKEAVKCDLVSYMHPLRSMLGRPFLEHWMPAL 139
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BLAST of mRNA_P-wetherbeei_contig7403.1.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 79.7 bits (195), Expect = 1.660e-15
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0 
Query:    1 MEKSLRRPANERLEMFGDAYLKLSMTLTAYLAEPDLLEEGLMSELRSNLVSNARLLQNARAAGLLPFIHPPRSLLCQPWLHWLPPL 86
            ++ SLRRP NERLE  GDA+L        +  +P + EEG+M+ LR N+VSNARL++ A   GL  FI+PPR++L QP+  W P L
Sbjct: 1031 LDCSLRRPINERLETLGDAWLNFYAGFVIFQDKPVMREEGMMTFLRKNIVSNARLVKCADGRGLREFIYPPRTILGQPFEMWAPSL 1116
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BLAST of mRNA_P-wetherbeei_contig7403.1.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 5.870e-15
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 MEKSLRRPANERLEMFGDAYLKLSMTLTAYLAEPDLLEEGLMSELRSNLVSNARLLQNARAAGLLPFIHPPRSLLCQPWLHWLPPL 86
            ++ SLRRP NERLE  GDA+L        ++ +P L+EEG+M+ LR N+VSNARLL+ A   GL  F++PPRS+L +P+  W P L
Sbjct: 1804 LDCSLRRPVNERLETLGDAWLNY---YAGFVDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSL 1886
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BLAST of mRNA_P-wetherbeei_contig7403.1.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.790e-13
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0 
Query:    8 PANERLEMFGDAYLKLSMTLTAYLAEPDLLEEGLMSELRSNLVSNARLLQNARAAGLLPFIHPPRSLLCQPWLHWLPPL 86
            P NERLE  GDA+L        +  +P L+EEG+M+ LR N+VSNARLL+ A   GL  F++PPRS+L +P+  W P L
Sbjct: 1162 PVNERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFMYPPRSILGRPFDMWSPSL 1240
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7403.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z3Y3_9STRA2.550e-1754.02Ribonuclease III domain-containing protein n=1 Tax... [more]
A0A2S1PRV6_FUCSE1.660e-1548.84Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
A0A6H5KQM7_9PHAE5.870e-1550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW2_ECTSI1.790e-1349.37Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 11..70
e-value: 2.9E-11
score: 43.9
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1..68
score: 11.328321
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 10..68
e-value: 2.85869E-13
score: 58.3931
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10Ribonuclease III domaincoord: 1..78
e-value: 2.5E-13
score: 51.9
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 9..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7403contigP-wetherbeei_contig7403:2176..2722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7403.1.1mRNA_P-wetherbeei_contig7403.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7403 2167..2722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7403.1.1 ID=prot_P-wetherbeei_contig7403.1.1|Name=mRNA_P-wetherbeei_contig7403.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=86bp
MEKSLRRPANERLEMFGDAYLKLSMTLTAYLAEPDLLEEGLMSELRSNLV
SNARLLQNARAAGLLPFIHPPRSLLCQPWLHWLPPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf