mRNA_P-wetherbeei_contig7353.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: D7FR95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR95_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.880e-35 Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 4 MLGLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWENGSADLHD 291
M LEG+GV +HLYEF+ C DEL++RP +N+ DT+VY+FGQPV WYFT DG++KKK KTNIIN KIE+ F + S G+ +VAYYISW + + D
Sbjct: 1 MYSLEGDGVCEHLYEFISCKDELSFRPTINIADTIVYKFGQPVSWYFTGVDGKVKKKFKTNIINTKIEEAFVKASVGSDIVAYYISWTSNGSKYQD 96
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A836CLN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN6_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.580e-31 Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 13 LEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSG-------------------GATVVAYYISWENGSADLHDGAKTDHALA 318
+ G+GV LYE+LWC DE+++ P +NVPDTVVY++GQPVHWYFTA DG +KKKL++N+ NAKIE+ F +K+ G+ VVAYYISWE AD G K++ A A
Sbjct: 1 IAGDGVCISLYEYLWCKDEISFSPQINVPDTVVYKYGQPVHWYFTAMDGTIKKKLRSNMTNAKIEESFLKKAHAQAPKTSKSKHHPQDALLEGSDVVAYYISWETNGADA--GNKSEQAAA 119
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A397AS04_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AS04_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.700e-30 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 1
Query: 10 GLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWENGSADLH 288
GLEG+GV ++L+ +LWC DE P++ VPDTVVY+F QP WYFT++ G++KKK K ++ N +IE EFCRKS G +VAYYI NG + L+
Sbjct: 8 GLEGDGVVENLFYYLWCKDEFGGGPSLLVPDTVVYKFTQPAFWYFTSKSGKVKKKAKASLTNVQIEKEFCRKSCGVDIVAYYIYMLNGMSSLN 100
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A397DGK7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DGK7_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.410e-30 Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = 1
Query: 10 GLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWENGSADLH 288
GLEG+GV ++L+ +LWC DE P++ +PDTVVY+F QP WYFT++ G++KKK K ++ N +IE EFCRKS G +VAYYI NG + L+
Sbjct: 8 GLEGDGVVENLFYYLWCKDEFGGGPSLLIPDTVVYKFTQPAFWYFTSKSGKVKKKAKASLTNVQIEKEFCRKSCGVDIVAYYIYMLNGMSSLN 100
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A7S2CLG5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLG5_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.980e-26 Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1
Query: 1 GMLGLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWENGSA 279
G+ + G+GVS + LW DELN+ P +N+PDTV+++FGQ V WYFT DG+LKKK K N++N +IE+ F R G+ +VAYYIS E A
Sbjct: 3 GLHSVHGDGVSDQFFHLLWSKDELNFGPTINIPDTVIFKFGQAVAWYFTGVDGKLKKKNKQNLVNVRIEEAFTRHVIGSDIVAYYISTETDDA 95
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A418AYB0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AYB0_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.330e-26 Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 1
Query: 1 GMLGLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWENGSADLHDGAKTDHALAAS 324
G LEG+GV ++L+ +LWC DE P++ +PDTVVY+F QP WYFT++ G++KKK K ++ N +IE EFCRKS G +VAYYI NG+ + + +AAS
Sbjct: 755 GNWSLEGDGVVENLFYYLWCKDEFGGGPSLLMPDTVVYKFTQPAFWYFTSKSGKVKKKAKASLTNVQIEKEFCRKSCGVDIVAYYIYMLNGTTAISSRGAPFNTMAAS 862
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: W4GQQ8_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQQ8_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.620e-25 Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 10 GLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYI 258
GLEG+GV ++L+ +LWC DE P++ +PDTVVY+F QP WYFT+ G++KKK+K ++ N +IE EFCRKS G +VAYYI
Sbjct: 8 GLEGDGVVENLFYYLWCKDEFGGGPSLLIPDTVVYKFTQPAFWYFTSTSGKVKKKVKASLTNVQIEKEFCRKSCGVDIVAYYI 90
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A1V9ZF24_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZF24_9STRA) HSP 1 Score: 107 bits (268), Expect = 5.250e-25 Identity = 44/86 (51.16%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 13 LEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWEN 270
LEG+G+ ++L+ +LWC DE P++ +PDT+VY+F QP +WYFT++ G++KKK KT++ N +IE EFCRK G +VAYY+ EN
Sbjct: 9 LEGDGLVENLFYYLWCKDEFGGGPSLLIPDTIVYKFTQPAYWYFTSKSGKVKKKSKTSLANVQIEKEFCRKLCGIDIVAYYLYMEN 94
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: T0S7F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S7F0_SAPDV) HSP 1 Score: 107 bits (267), Expect = 7.230e-25 Identity = 43/86 (50.00%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 13 LEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWEN 270
L+G+G+ ++L+ +LWC DE P++ +PDT++Y+F QP +WYFT++ G++KKK KT++ N +IE EFCRK G +VAYYI EN
Sbjct: 9 LDGDGLVENLFYYLWCKDEFGGGPSLLIPDTIIYKFTQPAYWYFTSKSGKVKKKAKTSLANVQIEKEFCRKLCGIDIVAYYIYMEN 94
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Match: A0A1V9Z6W2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6W2_9STRA) HSP 1 Score: 107 bits (266), Expect = 9.900e-25 Identity = 43/86 (50.00%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 13 LEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQDGRLKKKLKTNIINAKIEDEFCRKSGGATVVAYYISWEN 270
L+G+G+ ++L+ +LWC DE P++ +PDT++Y+F QP +WYFT++ G++KKK KT++ N +IE EFCRK G +VAYYI EN
Sbjct: 9 LQGDGLVENLFYYLWCKDEFGGGPSLLIPDTIIYKFTQPAYWYFTSKSGKVKKKSKTSLANVQIEKEFCRKLCGIDIVAYYIYMEN 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7353.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7353.2.1 >prot_P-wetherbeei_contig7353.2.1 ID=prot_P-wetherbeei_contig7353.2.1|Name=mRNA_P-wetherbeei_contig7353.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp MLGLEGNGVSQHLYEFLWCADELNYRPAVNVPDTVVYRFGQPVHWYFTAQback to top mRNA from alignment at P-wetherbeei_contig7353:2334..2765+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7353.2.1 ID=mRNA_P-wetherbeei_contig7353.2.1|Name=mRNA_P-wetherbeei_contig7353.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig7353:2334..2765+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7353:2334..2765+ >mRNA_P-wetherbeei_contig7353.2.1 ID=mRNA_P-wetherbeei_contig7353.2.1|Name=mRNA_P-wetherbeei_contig7353.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig7353:2334..2765+ (Phaeothamnion wetherbeei SAG_119_79)back to top |