mRNA_P-wetherbeei_contig7298.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: A0A6H5J9U1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U1_9PHAE) HSP 1 Score: 143 bits (360), Expect = 1.520e-38 Identity = 85/165 (51.52%), Postives = 85/165 (51.52%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
GLAFSRLWERMFGKKEMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ
Sbjct: 2 GLAFSRLWERMFGKKEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 86
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: C1FE97_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FE97_MICCC) HSP 1 Score: 144 bits (363), Expect = 7.690e-38 Identity = 87/168 (51.79%), Postives = 102/168 (60.71%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTR---NKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
GL F++L+ R+F KKEMRILM +R GS H+ A R+P V + + E E +P G S LC KI + + + GKTTILYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY+QNTQ
Sbjct: 2 GLTFTKLFARLFSKKEMRILMTFAGICLRRVF-----GSTS-----HKHALAF--------RVPQVFADYVLVPRESSSNEQIPCRGRNSS-DLCTLKIPLSLQVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 150
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: A0A6A7GAH9_9CRUS (ADP-ribosylation factor n=4 Tax=Eukaryota TaxID=2759 RepID=A0A6A7GAH9_9CRUS) HSP 1 Score: 139 bits (351), Expect = 9.610e-37 Identity = 82/165 (49.70%), Postives = 85/165 (51.52%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
G+AFSRLW+R+FGKKEMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ
Sbjct: 2 GIAFSRLWQRIFGKKEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 86
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: A0A812MG12_9DINO (ARF protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MG12_9DINO) HSP 1 Score: 141 bits (356), Expect = 1.900e-36 Identity = 119/331 (35.95%), Postives = 146/331 (44.11%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQVAPSIRSSAPSGTPASYRSRPLLPVGAGGDGLAWRRFELR-AVLSLFARLFKLLLLRGKQLCMARRLPRSVAL-SPQHR*W---RRGVPVCDCIAAGVAASRALFLSAPRPGAASEADSRCIFPLGTPWHAFLCRQWQGLIFVVDSNDRDRVDAARDELHRMLNED 980
GLAF+++W+RM GK+EMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKN+SFTVWDVGGQDKIRPLWRHYYQ T + S R + E+R AV+ +FA L A + + L + +HR W D + G+ + L + G I PL W + + GLI+VVDSNDRDR++ AR+EL++MLNED
Sbjct: 2 GLAFTKIWQRMIGKQEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNLSFTVWDVGGQDKIRPLWRHYYQGTNGLIYVVDS---------NDRDRIEDAREELNKMLNEDEMRDAVVLVFANKQDL-----PNAMTAAEVTEKLGLHNLRHRQWFIQSACATTGDGLYEGLDWYKNLSFTVWDVG-----GQDMIRPL---WRHYY-QGTSGLIYVVDSNDRDRIEDAREELNKMLNED 229
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: A0A139WNV5_TRICA (ADP-ribosylation factor 2-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WNV5_TRICA) HSP 1 Score: 141 bits (355), Expect = 2.410e-36 Identity = 86/186 (46.24%), Postives = 105/186 (56.45%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRR-GSVMVVAP--------------------MHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
GL S + R+FGKK+MRILMVGLDAAGK IL + G ++ P + + +W + Q ++ ER G D L + +I + + GKTT+LYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQ+KIR LW +YYQNTQ
Sbjct: 2 GLTISSVLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQSKIRKLWRHYFQNTQGLIFVVDSNDRERIGEADTELQNMM--------RILMVGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQNKIRRLWSYYYQNTQ 179
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: UPI0007BA0323 (ADP-ribosylation factor 4-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007BA0323) HSP 1 Score: 141 bits (356), Expect = 3.570e-36 Identity = 94/209 (44.98%), Postives = 116/209 (55.50%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRR-GSVMVVAP--------MHRRCAALSVWT---------------YCVQRLPVVLSAS---CCLLCERFGREDLPLAGDL----SCLGL-------------CWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
G+ FS L+ R+ KK+MR+LMVGLDAAGK +L + G V+ P + + + +VW + Q L +L+ LL ++DLP A + LGL C + + K GKTTILYKLKLGE+VTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHY+QNTQ
Sbjct: 2 GIFFSNLFSRLLKKKDMRLLMVGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVDYKNISFTVWDVGSQSLIRGLWRHYYHNTQELNAMLAEDEMRDALLLVLANKQDLPKAMAVHELTDRLGLHALRGRQWFVQATCAVQGSVAA-GKAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQ 209
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: B8BS84_THAPS (ADP-ribosylation factor n=39 Tax=Eukaryota TaxID=2759 RepID=B8BS84_THAPS) HSP 1 Score: 137 bits (346), Expect = 4.450e-36 Identity = 83/165 (50.30%), Postives = 84/165 (50.91%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
GL FSRL+ERMFGKKEMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ
Sbjct: 2 GLTFSRLFERMFGKKEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 86
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: A0A5D6YTC8_9STRA (ADP-ribosylation factor n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A5D6YTC8_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.060e-35 Identity = 81/165 (49.09%), Postives = 85/165 (51.52%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
G+AFSR++ER+FGKKEMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ
Sbjct: 2 GMAFSRVFERLFGKKEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 86
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: M4BN95_HYAAE (ADP-ribosylation factor n=8 Tax=Oomycota TaxID=4762 RepID=M4BN95_HYAAE) HSP 1 Score: 136 bits (342), Expect = 1.640e-35 Identity = 81/165 (49.09%), Postives = 85/165 (51.52%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
G+AFSR++ER+FGKKEMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ
Sbjct: 2 GMAFSRVFERLFGKKEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 86
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Match: K3WYT4_GLOUD (ADP-ribosylation factor n=30 Tax=Stramenopiles TaxID=33634 RepID=K3WYT4_GLOUD) HSP 1 Score: 136 bits (342), Expect = 1.640e-35 Identity = 81/165 (49.09%), Postives = 85/165 (51.52%), Query Frame = 3
Query: 3 GLAFSRLWERMFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVQRLPVVLSASCCLLCERFGREDLPLAGDLSCLGLCWQKIKIKTRNKTGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 497
G+AFSR++ER+FGKKEMRILMVGLDAA GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ
Sbjct: 2 GMAFSRVFERLFGKKEMRILMVGLDAA--------------------------------------------------------------------------------GKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQ 86 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7298.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7298.2.1 >prot_P-wetherbeei_contig7298.2.1 ID=prot_P-wetherbeei_contig7298.2.1|Name=mRNA_P-wetherbeei_contig7298.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp MFGKKEMRILMVGLDAAGKRPILSHRRGSVMVVAPMHRRCAALSVWTYCVback to top mRNA from alignment at P-wetherbeei_contig7298:967..1946+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7298.2.1 ID=mRNA_P-wetherbeei_contig7298.2.1|Name=mRNA_P-wetherbeei_contig7298.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=980bp|location=Sequence derived from alignment at P-wetherbeei_contig7298:967..1946+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7298:967..1946+ >mRNA_P-wetherbeei_contig7298.2.1 ID=mRNA_P-wetherbeei_contig7298.2.1|Name=mRNA_P-wetherbeei_contig7298.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig7298:967..1946+ (Phaeothamnion wetherbeei SAG_119_79)back to top |