prot_P-wetherbeei_contig7295.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig7295.2.1
Unique Name	prot_P-wetherbeei_contig7295.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	263

Homology

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A7S3XXW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXW5_HETAK)

HSP 1 Score: 124 bits (310), Expect = 4.540e-32
Identity = 58/125 (46.40%), Postives = 87/125 (69.60%), Query Frame = 0

Query:  110 GQNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 234
            G N+D CE C + ++ ++   +  F V+VC +C+  ND+Y L+ K +V  ++ LPEGTI VL F+ K+NPRHG+W  MKL+L+K+V+KYS +RWGG EGL  ERRRR+    + ++K+T  + KK
Sbjct:    2 GINTDSCEACRE-DSELNETFYQRFQVSVCNQCKISNDDYKLITKAEVVQMFCLPEGTIQVLDFIEKENPRHGTWTPMKLFLQKQVKKYSHDRWGGLEGLLQERRRRDEKKLKNALKRTSGLLKK 125

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: D7FX65_ECTSI (XPA_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX65_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 6.910e-32
Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 0

Query:  126 IDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 234
            +D  L +AF ++VC  C+   +E+  V  KDV   YLLP+GTI+VL F+ +DNP H SW KMKLYLR+EV  YS +RWG  +GL AERRRRE   Y+RS+ +TK IFK+
Sbjct:    1 MDKELLEAFGISVCRTCKMSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYKRWGSEDGLAAERRRRESLKYDRSLARTKGIFKR 109

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A6H5KUI3_9PHAE (XPA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI3_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.370e-31
Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 0

Query:  116 CEVCG--DPNAPIDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 234
            CE CG    +A +D  L +AF ++VC  C+   +E+  V  KDV   YLLP+GTI+VL F+ +DNP H SW KMKLYLR+EV  YS  RWG  +GL AERRRRE   Y+RS+ +TK IFK+
Sbjct:  172 CEGCGGEQDDARMDKELLEAFGISVCRTCKMSREEFQYVTTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYRRWGSEDGLAAERRRRESLKYDRSLARTKGIFKR 292

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A835ZE73_9STRA (XPA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE73_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.260e-25
Identity = 54/123 (43.90%), Postives = 78/123 (63.41%), Query Frame = 0

Query:  115 VCEVCG-----DPNAPIDVRLWDAFTVAVCARCRTDNDEYGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIF 232
            VCE CG     DP   +D +L +AF VAVC  C+   + Y L+ K DV  ++LLPEGTI VL ++ ++NPR+  W  M+LYL K+   ++ +RW   E L+ ER+RR+   +E SVK+TK +F
Sbjct:   63 VCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 185

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A4D9D9F3_9STRA (XPA_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 8.050e-24
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 0

Query:  116 CEVCGDPNAPIDVRLWDAFTVAVCARCRTDNDE-YGLVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 234
            CEVCG  +  +D    D F + VC  C+ +N+E YGLV K D    +LL EGT+ V+P+L ++NPR+  + KMKLY R+ +   + ERW GPEGL  ER RR    YE ++ KT  +F K
Sbjct:  104 CEVCG--SGLVDPMYHDVFRITVCTPCKNNNEEEYGLVTKGDAVAEFLLQEGTMRVMPYLERNNPRNTKYQKMKLYCRRLLRAKAYERWDGPEGLAEERNRRRERRYESAIDKTLNVFTK 221

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A7S3PXE3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXE3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.660e-17
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 0

Query:  152 VPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFKK 234
            V K+D  G Y LP+GT+ V  +  KDNPR   WNKMKLY R E+ + + +RWGG EGL  ERRRRE+   E+ + +  R+FKK
Sbjct:   86 VTKQDAKGKYCLPDGTLEVCEYTEKDNPRQSKWNKMKLYNRSEIRRRARDRWGGLEGLQEERRRRENKRSEKDMAEGYRLFKK 168

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A168NEF3_ABSGL (XPA_C domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168NEF3_ABSGL)

HSP 1 Score: 86.7 bits (213), Expect = 2.060e-16
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 0

Query:  116 CEVCGDPNAPIDVRLWDAFTVAVCARCRTDN-DEYGLVPKKDVAGVYLLPEGTIS---VLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTK 229
            C+ C   N  +D   +  F + VCA C+    D+Y L+ K +    YLL +  +    +LP   K NPR  +WN M LY+R+ VE Y+ ++WGGPEGLDAE  RRE    E+  KK K
Sbjct:  106 CKECDSTN--VDTVFYQVFNICVCADCKEKYPDKYSLITKTEAREDYLLTDPELKDKDLLPHWSKPNPRKSTWNNMMLYVREMVEDYAFQKWGGPEGLDAEYERRESQKKEKXDKKFK 221

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A1E3NYT0_WICAA (XPA_C domain-containing protein n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3NYT0_WICAA)

HSP 1 Score: 86.3 bits (212), Expect = 7.200e-16
Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 0

Query:  111 QNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTD-NDEYGLVPKKDVAGVYLLPEGTI---SVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKK 227
            +N+  C  CG  +  ++ +L+D F   VC RC  D  D+Y L+ K +    Y L +  +   S+LP + K NP HG++N+M+LYLR +VEK++ ++WGG EGLDAE +RRE    +R  KK
Sbjct:  171 ENAIKCYECG--SFELNQKLYDVFKCRVCKRCEKDIPDKYSLLTKTECREDYFLTDPELRDDSILPHMEKPNP-HGTFNRMQLYLRYQVEKFAFKKWGGAEGLDAEWQRREEQKIKRRDKK 288

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: A0A0H5C2R2_CYBJN (XPA_C domain-containing protein n=2 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A0H5C2R2_CYBJN)

HSP 1 Score: 83.2 bits (204), Expect = 7.630e-15
Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 0

Query:  112 NSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTDN-DEYGLVPKKDVAGVYLLPEGTI---SVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKK 227
            N+  C  CG     ID +LW+ F   VC RC   N D+Y L+ K +    Y L +  +   S+L  L K NP H  +N+M+L+LR +VE+++ ++WGGPEGLDAE +RRE    +R  KK
Sbjct:  153 NATKCFECG--TFEIDQQLWEVFKCRVCKRCAKANPDKYSLLTKTECREDYFLTDPELEDQSLLHRLFKPNP-HSKFNRMQLFLRYQVEEFAFQKWGGPEGLDAEWQRREEFKVKRREKK 269

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BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Match: K0KI80_WICCF (DNA repair protein n=1 Tax=Wickerhamomyces ciferrii (strain ATCC 14091 / BCRC 22168 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031 F-60-10) TaxID=1206466 RepID=K0KI80_WICCF)

HSP 1 Score: 82.8 bits (203), Expect = 1.320e-14
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 0

Query:  111 QNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTD-NDEYGLVPKKDVAGVYLLPEGTI---SVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSDERWGGPEGLDAERRRREHAAYERSVKKTKRIFK 233
            +N+  C  CG  +  ++++L++ F   VC RC  +  D+Y L+ K +    Y L +  +   S+LP + K NP HG++N+M+LYLR +VE+++ ++WGGPEGLDAE +RRE    +R  +K ++  K
Sbjct:  180 ENAPKCFECG--SFELNMKLFEHFKCRVCKRCEKNIPDKYSLLTKTESREDYFLTDPELRDESILPHMEKPNP-HGTFNRMQLYLRYQVEEFAFKKWGGPEGLDAEWQRREEFKVKRRDQKYEKKMK 303

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig7295.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3XXW5_HETAK	4.540e-32	46.40	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
D7FX65_ECTSI	6.910e-32	54.13	XPA_C domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KUI3_9PHAE	1.370e-31	52.89	XPA_C domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A835ZE73_9STRA	1.260e-25	43.90	XPA_C domain-containing protein n=1 Tax=Tribonema ...	[more]
A0A4D9D9F3_9STRA	8.050e-24	45.00	XPA_C domain-containing protein n=2 Tax=Monodopsid...	[more]
A0A7S3PXE3_9STRA	2.660e-17	50.60	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A168NEF3_ABSGL	2.060e-16	40.68	XPA_C domain-containing protein n=1 Tax=Absidia gl...	[more]
A0A1E3NYT0_WICAA	7.200e-16	41.32	XPA_C domain-containing protein n=1 Tax=Wickerhamo...	[more]
A0A0H5C2R2_CYBJN	7.630e-15	41.67	XPA_C domain-containing protein n=2 Tax=Cyberlindn...	[more]
K0KI80_WICCF	1.320e-14	37.80	DNA repair protein n=1 Tax=Wickerhamomyces ciferri...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 7..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..82
IPR037129	XPA domain superfamily	GENE3D	3.90.530.10		coord: 110..217 e-value: 1.3E-25 score: 91.4
IPR022656	XPA, C-terminal	PFAM	PF05181	XPA_C	coord: 149..195 e-value: 9.5E-10 score: 38.2
IPR000465	XPA	PANTHER	PTHR10142	DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLS	coord: 3..234
IPR009061	Putative DNA-binding domain superfamily	SUPERFAMILY	46955	Putative DNA-binding domain	coord: 147..217

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig7295	contig	P-wetherbeei_contig7295:2090..2878 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig7295.2.1	mRNA_P-wetherbeei_contig7295.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig7295 1560..3130 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig7295.2.1 ID=prot_P-wetherbeei_contig7295.2.1|Name=mRNA_P-wetherbeei_contig7295.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
MASTELTEEQRQRIEANRRRALELQKKCRVEHLAASPAASPAASSKSGGS
SQDRKRSAESFSTRAGGSGAAAVRSTNIPNKRQHGPEDGGPASAGASENA
FPTGAAAAAGQNSDVCEVCGDPNAPIDVRLWDAFTVAVCARCRTDNDEYG
LVPKKDVAGVYLLPEGTISVLPFLVKDNPRHGSWNKMKLYLRKEVEKYSD
ERWGGPEGLDAERRRREHAAYERSVKKTKRIFKKFGKEGHAAASGGGDSG
FLSTKDDDSDCD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037129	XPA_sf
IPR022656	XPA_C
IPR000465	XPA
IPR009061	DNA-bd_dom_put_sf