mRNA_P-wetherbeei_contig7269.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7269.1.1
Unique NamemRNA_P-wetherbeei_contig7269.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: D7FP05_ECTSI (GPA1, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP05_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 9.070e-18
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG  +SKMSAE+KEA++K+KEV+  N AAFQKE EKIKLLLLGAGESGKSTIFKQMK+
Sbjct:    1 MGICSSKMSAEDKEALRKTKEVEAANAAAFQKEQEKIKLLLLGAGESGKSTIFKQMKI 58
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BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: A0A7S2XUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUR0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.330e-16
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG   S +S EE+EA+K SKEVD LN+ AF+KE EKIKLLLLGAGESGKSTIFKQMKV
Sbjct:    1 MGVCGSSLSPEEREALKASKEVDALNEEAFKKEQEKIKLLLLGAGESGKSTIFKQMKV 58
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BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: A0A836CAY4_9STRA (GPA1, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.190e-14
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG   +K+SAEEKEA++K+KEV+ +   A++KE EKIKLLLLGAGESGKST+FKQMK+
Sbjct:    1 MGACGAKLSAEEKEAIRKNKEVEAIAAEAYRKEREKIKLLLLGAGESGKSTVFKQMKI 58
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BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: W7U751_9STRA (G-protein complex alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U751_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.460e-13
Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG +   +SA++ EA K SK+VD  N AAF+KE EKIKLLLLGAGESGKSTIFKQMK+
Sbjct:    1 MGNLCGSISADDIEAAKISKDVDQANAAAFKKEQEKIKLLLLGAGESGKSTIFKQMKL 58
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BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: F0WI40_9STRA (G protein alpha subunit putative n=3 Tax=Albugo TaxID=65356 RepID=F0WI40_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.750e-11
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG   SKM+ EEK    KSKE+D  N+ A + E EK+KLLLLGAGESGKST+FKQMK+
Sbjct:    1 MGLCGSKMTDEEKAQYVKSKELDAKNEQAHRAEQEKVKLLLLGAGESGKSTVFKQMKL 58
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BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: A0A6U4C937_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4C937_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.860e-11
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG  TS ++AEEK A + +K +D  N   + KE +K+KLLLLGAGESGKSTIFKQMK+
Sbjct:    1 MGICTSSLTAEEKAANEHNKNLDSQNYNDYLKEQDKVKLLLLGAGESGKSTIFKQMKI 58
[Close]
BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: A0A835YS20_9STRA (Guanine nucleotide binding protein, alpha subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS20_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.240e-11
Identity = 34/57 (59.65%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    4 GCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            GCV+   + EE+EA K+S+EVD+L ++A+++E +KI+LLLLG GESGKSTIF+QMK+
Sbjct:    3 GCVS--RNPEEREAWKRSREVDELCQSAYRREQKKIRLLLLGPGESGKSTIFRQMKL 57
[Close]
BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: M9NY12_9STRA (G-protein alpha subunit (Fragment) n=15 Tax=Phytophthora TaxID=4783 RepID=M9NY12_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.280e-11
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1 
Query:    4 GCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            G   S+M+  ++ AM KS+E++  N+ A + E EK+KLLLLGAGESGKST+FKQMK+
Sbjct:    1 GLCASQMTDTDRVAMAKSREIEAKNEEAHRVEQEKVKLLLLGAGESGKSTVFKQMKI 57
[Close]
BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: B8C8C6_THAPS (Heterotrimeric G protein alpha subunit 1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8C6_THAPS)

HSP 1 Score: 65.1 bits (157), Expect = 6.550e-11
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG   S+ +AEEK AMK SKE++      F+ +N K+KLLLLGAGESGKSTIFKQM+V
Sbjct:    1 MGACLSRGNAEEKAAMKASKEIEKQMNNQFEMDNAKVKLLLLGAGESGKSTIFKQMRV 58
[Close]
BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Match: A0A6U4C926_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4C926_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.230e-10
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 1 
Query:    1 MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKSTIFKQMKV 174
            MG  TS ++AEEK A + +K +D  N   + KE +K+KLLLLGAGESGKSTIFKQMK+
Sbjct:    1 MGICTSSLTAEEKAANEHNKNLDSQNYNDYLKEQDKVKLLLLGAGESGKSTIFKQMKI 58
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7269.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP05_ECTSI9.070e-1877.59GPA1, alpha subunit of a heterotrimeric G protein ... [more]
A0A7S2XUR0_9STRA6.330e-1675.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CAY4_9STRA2.190e-1467.24GPA1, alpha subunit of a heterotrimeric G protein ... [more]
W7U751_9STRA5.460e-1368.97G-protein complex alpha subunit n=1 Tax=Nannochlor... [more]
F0WI40_9STRA4.750e-1163.79G protein alpha subunit putative n=3 Tax=Albugo Ta... [more]
A0A6U4C937_9STRA4.860e-1160.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835YS20_9STRA6.240e-1159.65Guanine nucleotide binding protein, alpha subunit ... [more]
M9NY12_9STRA6.280e-1156.14G-protein alpha subunit (Fragment) n=15 Tax=Phytop... [more]
B8C8C6_THAPS6.550e-1162.07Heterotrimeric G protein alpha subunit 1 n=1 Tax=T... [more]
A0A6U4C926_9STRA1.230e-1060.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7269contigP-wetherbeei_contig7269:1376..1549 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FP05
Preferred nameGPA1
PFAMsG-alpha
Model size174
Max annot lvl2759|Eukaryota
KEGG koko:K04534,ko:K04630
KEGG Pathwayko04015,ko04022,ko04024,ko04062,ko04071,ko04261,ko04360,ko04371,ko04540,ko04611,ko04670,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04730,ko04914,ko04915,ko04916,ko04921,ko04923,ko04924,ko04926,ko04934,ko04971,ko05012,ko05030,ko05032,ko05034,ko05133,ko05142,ko05145,ko05200,map04015,map04022,map04024,map04062,map04071,map04261,map04360,map04371,map04540,map04611,map04670,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04730,map04914,map04915,map04916,map04921,map04923,map04924,map04926,map04934,map04971,map05012,map05030,map05032,map05034,map05133,map05142,map05145,map05200
KEGG ModuleM00695
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.49e-18
EggNOG OGsKOG0082@1|root,KOG0082@2759|Eukaryota
DescriptionG-protein beta/gamma-subunit complex binding
Cds size174
COG categoryV
BRITEko00000,ko00001,ko00002,ko04031,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186969.1768117-CDS-P-wetherbeei_contig7269:1375..15491683186969.1768117-CDS-P-wetherbeei_contig7269:1375..1549Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7269 1376..1549 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7269.1.1prot_P-wetherbeei_contig7269.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7269 1376..1549 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7269.1.1

>prot_P-wetherbeei_contig7269.1.1 ID=prot_P-wetherbeei_contig7269.1.1|Name=mRNA_P-wetherbeei_contig7269.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp
MGCVTSKMSAEEKEAMKKSKEVDDLNKAAFQKENEKIKLLLLGAGESGKS
TIFKQMKV
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mRNA from alignment at P-wetherbeei_contig7269:1376..1549+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7269.1.1 ID=mRNA_P-wetherbeei_contig7269.1.1|Name=mRNA_P-wetherbeei_contig7269.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig7269:1376..1549+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGTGCGTTACAAGCAAAATGTCGGCGGAGGAGAAGGAGGCAATGAA
AAAGTCAAAGGAGGTGGACGACTTAAATAAGGCGGCGTTCCAAAAAGAGA
ACGAAAAGATAAAGCTCCTGCTGCTAGGCGCAGGAGAGTCTGGAAAGTCA
ACGATCTTCAAGCAGATGAAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7269:1376..1549+

>mRNA_P-wetherbeei_contig7269.1.1 ID=mRNA_P-wetherbeei_contig7269.1.1|Name=mRNA_P-wetherbeei_contig7269.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=174bp|location=Sequence derived from alignment at P-wetherbeei_contig7269:1376..1549+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGTGCGTTACAAGCAAAATGTCGGCGGAGGAGAAGGAGGCAATGAA
AAAGTCAAAGGAGGTGGACGACTTAAATAAGGCGGCGTTCCAAAAAGAGA
ACGAAAAGATAAAGCTCCTGCTGCTAGGCGCAGGAGAGTCTGGAAAGTCA
ACGATCTTCAAGCAGATGAAGGTG
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