mRNA_P-wetherbeei_contig7238.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: D7FLI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI5_ECTSI) HSP 1 Score: 151 bits (382), Expect = 1.190e-41 Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 10 MARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELI 408
M +VR + G L ++ FP DS C RWAV+TSI PT T+RQL A DWC+VVV D+ P+ +Y + ++YLTP+DQE+LPYRI LPWNHFGRKNIGYLYA+HHGA VIYD DDDN LI
Sbjct: 1 MEKVRTYEGARLPAPEA-------MFPAPLDSEKCERWAVLTSIFEPTDTVRQLGAAEDWCVVVVGDQNGPA--EYNVEGVIYLTPQDQEQLPYRIVPLLPWNHFGRKNIGYLYAVHHGATVIYDVDDDNALI 124
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: A0A7S3S1Z0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S1Z0_EMIHU) HSP 1 Score: 144 bits (362), Expect = 3.650e-39 Identity = 71/136 (52.21%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 1 LFKMARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELI 408
LF+ +VR + G F P P S C +WAVVTSI PPT T+RQLAALP WC+VV D+K P V+Y + ++YLTP QE LP+ L WNHFGRKN+G+LYAI HGA+ +YDTDDDNEL+
Sbjct: 56 LFRAVKVRSYQGPRRFADWRPRPDAKKGAP----SKECRQWAVVTSIFPPTQTVRQLAALPSWCVVVAGDKKGP--VEYNLSGVLYLTPAMQEALPFESKAELRWNHFGRKNLGFLYAIQHGARWVYDTDDDNELL 185
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: W7SZI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SZI8_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.670e-38 Identity = 67/113 (59.29%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 85 FPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELIVGPDG 423
+PR + L C +WAVVT+I PT +RQL + DWC+VVV D+KSPS D +++YL+PE+QE LPY+I L WNHFGRKNIG+LYA+HHGA+VIYDTDDDN L V G
Sbjct: 97 YPRRAEQLLCNKWAVVTTIFGPTTLVRQLVGMKDWCVVVVGDKKSPSTYDIQSDTLIYLSPEEQEALPYQIIPLLKWNHFGRKNIGFLYAMHHGAEVIYDTDDDNILKVDSRG 209
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: A0A7S3YTT7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YTT7_9EUKA) HSP 1 Score: 138 bits (348), Expect = 2.670e-37 Identity = 71/148 (47.97%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 1 LFKM-ARVRRFSGQLLFGGDSPPLSTVTK---FPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMP--------SIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELI 408
LF M ++R F G+ LF S+ + + R C RW V T+I PT TI++LAAL +WC+VVV D+K P D G +VYLTPEDQE+LPY + + L WNHFGRKNIG+++A HHGA++IYD DDDN LI
Sbjct: 124 LFTMDEKIRDFPGERLFADGVAATSSESSNGNYARMSGVSTCERWGVCTTIFEPTETIKELAALGNWCVVVVGDKKGPKSYDLGAMRNGTAYPGQVVYLTPEDQEKLPYALTNRLKWNHFGRKNIGFIFAAHHGAKMIYDVDDDNTLI 271
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: A0A0M0JI26_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JI26_9EUKA) HSP 1 Score: 137 bits (344), Expect = 4.050e-36 Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 1 LFKMARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNEL 405
LF+ RVR +S LF PPL + P C WAV T+I PT T++++AAL DWCLV+ D+KSP + + YL+PE QE+LP+ L WNHFGRKN+G+LYAI GA+ +YDTDDDNEL
Sbjct: 19 LFRAVRVRTYSDARLFAAWKPPLQSPA-----PARSRCKNWAVTTTIFAPTTTVKRIAALEDWCLVIAGDKKSPREYNVSGKHAYYLSPEAQEQLPFATRKLLRWNHFGRKNLGFLYAIQQGARWVYDTDDDNEL 148
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: W7TUS0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUS0_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.160e-35 Identity = 69/142 (48.59%), Postives = 91/142 (64.08%), Query Frame = 1
Query: 1 LFKMARVRRFSGQLLFGGDSPPLSTVTK-FPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELIVGPDG 423
+F A+ R + G F + K +PR + L C +WAVVT+I PT ++QL + DWC+VVV D++SPS D ++++L PE+QE LPY I L WNHFGRKNIG+LYA+ HGA+VIYDTDDDN L V G
Sbjct: 68 VFVAAKRRTYHGSRPFSSNISTSGVSHKPYPRSAEQLTCNKWAVVTTIFGPTALVKQLVEMKDWCVVVVGDQQSPSTYDIQSDNLIFLGPEEQEALPYHIIPLLKWNHFGRKNIGFLYAMQHGAEVIYDTDDDNILKVDSRG 209
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: A0A6H5JQ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ39_9PHAE) HSP 1 Score: 137 bits (346), Expect = 5.260e-35 Identity = 69/141 (48.94%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 1 LFKMARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELIVGPDG 423
+F M ++R F G + + + P D C +WAV+TSI PT T++QLA L WC+VVV D+ P+ +Y + + YLTP DQ+ LPYRI LPWNHFGRKN+GY+YAI HGA+VIYD DDDN LI +G
Sbjct: 48 VFAMEQIRTFEGPRV----DFDAAEILPGPPPADEEMCEKWAVLTSIFEPTETVKQLAELRGWCVVVVGDKNGPA--EYHVTGVKYLTPGDQDALPYRITEILPWNHFGRKNVGYMYAIQHGAKVIYDVDDDNALIHPEEG 182
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: D8LCM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM9_ECTSI) HSP 1 Score: 135 bits (340), Expect = 3.530e-34 Identity = 68/142 (47.89%), Postives = 92/142 (64.79%), Query Frame = 1
Query: 1 LFKMARVRRFSGQLLFGGDSPP-LSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELIVGPDG 423
+F M +VR ++G + +PP + + FP C RWAV+ S + PT ++QLA L +WC+VVV D+ P+ +Y + +V LTP DQE LPYRI +PWNH GRKNIGYLYAIHHGA+VIYD DD + L+ +G
Sbjct: 53 MFSMEKVRTYAGPRMEIRTTPPSVEPSSLFPPPAAEDTCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPT--EYNVVGVVLLTPSDQEALPYRITDLIPWNHVGRKNIGYLYAIHHGAKVIYDVDDAHVLMRPEEG 192
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: A0A7S1INI2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1INI2_9EUGL) HSP 1 Score: 130 bits (328), Expect = 1.360e-33 Identity = 65/137 (47.45%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 1 LFKMARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNELIV 411
LF+M R R+F L + + + CA+WAV T+I P+ T++Q+A L WC+VVV D+K+P + + + + V L EDQ +LPYRIA LPWNHFGRKN+G++YA+ HGA+VIYD DDDNELI+
Sbjct: 44 LFRMQRTRQFPMHEL-------RKSAAQTTGWKQGKQCAQWAVSTTIWEPSKTLKQIAKLKTWCIVVVLDKKTP--LPFEVENAVILGVEDQLKLPYRIARRLPWNHFGRKNVGFMYAVAHGAEVIYDCDDDNELII 171
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Match: A0A1S3JBQ2_LINUN (probable glycosyltransferase STELLO2 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JBQ2_LINUN) HSP 1 Score: 131 bits (329), Expect = 1.420e-33 Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 4 FKMARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTIRQLAALPDWCLVVVADRKSPSKVDYGMPSIVYLTPEDQERLPYRIAHHLPWNHFGRKNIGYLYAIHHGAQVIYDTDDDNEL 405
F+M RVR F G P ST T + + P + C +W V+T+I P+ ++QL+ + WC+VVVAD+K P K Y +P++ YL+ +QE + I L WNHFGRKNIGY+YAIHHGA+ IYDTDDDN L
Sbjct: 68 FQMKRVRDFEKDKRVGYRPP--STCTDYHKKPPATPCKKWVVITTIFEPSELVKQLSEITSWCVVVVADKKGPEK--YVVPNVKYLSVLEQESCQFHICKLLIWNHFGRKNIGYMYAIHHGAEYIYDTDDDNVL 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7238.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7238.4.1 >prot_P-wetherbeei_contig7238.4.1 ID=prot_P-wetherbeei_contig7238.4.1|Name=mRNA_P-wetherbeei_contig7238.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MARVRRFSGQLLFGGDSPPLSTVTKFPRFPDSLHCARWAVVTSINPPTLTback to top mRNA from alignment at P-wetherbeei_contig7238:2648..3070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7238.4.1 ID=mRNA_P-wetherbeei_contig7238.4.1|Name=mRNA_P-wetherbeei_contig7238.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig7238:2648..3070+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7238:2648..3070+ >mRNA_P-wetherbeei_contig7238.4.1 ID=mRNA_P-wetherbeei_contig7238.4.1|Name=mRNA_P-wetherbeei_contig7238.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig7238:2648..3070+ (Phaeothamnion wetherbeei SAG_119_79)back to top |