mRNA_P-wetherbeei_contig723.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig723.1.1
Unique NamemRNA_P-wetherbeei_contig723.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK)

HSP 1 Score: 182 bits (462), Expect = 5.330e-47
Identity = 138/444 (31.08%), Postives = 192/444 (43.24%), Query Frame = 1
Query:  658 LGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDR-RSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLVVEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPATAAL----SPFPPSPQDATVFSHGPSAPPPEDPAFRSASYHRYDGGYGGAYAGGGDGXXGAYXXXXXXXXXXXXXXXXXXGGSSVSGRAAAAAAAMNE-ECVVCMNSAIHVTFVPCGHQSCCRLCGPLFSECPVCMAPITQVMNTYKV 1968
            L PF V      G   +    P   A   + +    Q++GV Y  R  A+ A EA++PP+W  K     C  CGA F +LRP  HCRNCG + C+ C  + WP   LP+TYLD    +++  VC  C+ A   FR ALR GD  G   AY+TG VNLRTP+     G Y +HCAAAGGSL L+ WLV+E+G  +    +     P+   D   S +++AA +  ++++R+L +   C   +I +        EKL+                                      P  AAL     P P +PQ + V +   S P    P+F S +                                          G    G  A + A M E ECV+C  + I+   VPCGH + C  C   F+ECPVC  P+ QV+ T+ V
Sbjct:   14 LRPFQVDTVKGAGATNSNGQRPSWQAIVYQGQTNKLQLVGV-YDSRDEAVAAAEAYSPPLWEQKRGGLGCGNCGAKFALLRPEKHCRNCGRVVCRECARAHWPPRMLPATYLDGAGEKKA-RVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYT-VHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQR--PLFASDGITSCMSLAAVNGNLEMMRWLTQHE-CSVRDIVNLEHFYAATEKLLA------------------------LPSTGTAGPLNSEPVAAALVDNARPPPFNPQQSVVVASVGSTPI-SAPSFESIT---------------------------------------PSAGIEQQGVTAVSGAGMEENECVICFENNINTVIVPCGHTAVCDGCSGKFTECPVCREPVQQVIKTFGV 387          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.750e-39
Identity = 93/238 (39.08%), Postives = 131/238 (55.04%), Query Frame = 1
Query:  724 KQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFG-MLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRR-SALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLVVEG 1428
            KQDAE       P ++    Y   +   RA E+F+PP+W    KD  C++C + FG +L+ RHHCRNCG L C  C +  WP + LP TY + D   + V VC+ C  A   FR A   G   GAM A+STGCVNLR P+    + +  +HCAA+GG+L ++ WLV+++  PL       +    L   RR S +  AAA   + ++RYL   +GC+  EI D   L R +EK + +G
Sbjct:  342 KQDAE-------PVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTY-NVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL-PVHCAASGGNLNILAWLVDDRCCPLFLDREKKI---ALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDG 567          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A482RTU5_9ARCH (FYVE-type domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTU5_9ARCH)

HSP 1 Score: 157 bits (398), Expect = 5.350e-38
Identity = 97/261 (37.16%), Postives = 133/261 (50.96%), Query Frame = 1
Query:  637 LRSRRKKLGPFAV--TLDDNTGRWKALVGMPK---QDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCR 1401
            L +RR  L P+++      N  +W+  + + +      EA+ + + P Q+       R V    C + APP+W PK    TC LC  GF M R  HHCRNCGH+ C +C+D  WPA  LPSTY    D+ + V VC  C      F  AL+ GDL  A+  YS+G +NL  P        Y +H A +GGSL L+ WL+E +   L   A+     P+ T    +ALAVAA     +++ YLI  RGC  AEI +   L R
Sbjct:  154 LVNRRAYL-PYSIERVAGSNGVKWRGTLSLRQPHLSPKEASPQGSRPDQLALSVCPSREVCEDLCVSAAPPLWRPKQASLTCVLCRTGFSMFRKPHHCRNCGHIVCPDCSDRLWPAGMLPSTY---HDQEKVVRVCYACHLLLEHFVLALKRGDLDEALSLYSSGNINLHQPLTVFQHWAYPVHLACSGGSLPLLQWLLEVKRCSLMDRASGK---PLATGSGLTALAVAAYQGHAEIMHYLIHARGCSVAEIGEVDVLQR 407          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.370e-36
Identity = 93/229 (40.61%), Postives = 122/229 (53.28%), Query Frame = 1
Query:  763 QQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGML-RPRHHCRNCGHLCCKNCTD-SWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPL------SFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLVVE 1425
            Q+ LGV Y     A  AC+AFA P    K     C+LC + FGML R RHHCRNCG   C  C   SWP++ LP TY  A  + R   +C  C   N  FR AL  GD A A  AY  GCVNLR P++   +G+  +HCAA GGS+ L+ WL+EE+  PL      + A  NG         + S +AVAA +    ++RYL+ +   +  EI D   L R ++K + E
Sbjct:    7 QEELGV-YETPDAAEEACKAFAVP---KKQNAALCALCKSYFGMLSRRRHHCRNCGRAVCDACAKTSWPSSMLPFTY-SAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGL-PVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGR--------KESVMAVAAQNGHTHIMRYLLHKHSVKVNEITDHKALWRALDKALRE 221          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 2.940e-34
Identity = 73/173 (42.20%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  724 KQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFG-MLRPRHHCRNCGHLCCKNCTDS-WPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPL 1236
            KQDAE       P ++    Y   +   RA E+F+PP+W    KD  C++C + FG +L+ RHHCRNCG L C  C +  WP + LP TY + D   + V VC+ C  A   FR A   G   GAM A+STGCVNLR P+    + +  +HCAA+GG+L ++ WLV+++  PL
Sbjct:   18 KQDAE-------PVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTY-NVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNEL-PVHCAASGGNLNILAWLVDDRCCPL 181          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 6.820e-32
Identity = 81/198 (40.91%), Postives = 110/198 (55.56%), Query Frame = 1
Query:  760 PQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGML--RPRHHCRNCGHLCCKNCT-DSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYL 1344
            P  ++   ++  + A RA E F+ P+W   T + TC+ C + F  +  R +HHCRNCG L C  C    WP   LP +Y  +   RR V VC  C S    FR AL  G   GAMEAY TGCVNLR P +   D    +HCAAAGG+++LM WLVE++  P+     +   +P L    RS +A AA   R++++RYL
Sbjct:  556 PTPLVCGKFATSYEADRAAETFSSPVWHEPTPNSTCAECQSSFRPVFQRRKHHCRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERR-VRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS---DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMD--DEKTMPHLDGAGRSVMAAAADSGRVEMMRYL 747          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.830e-31
Identity = 81/198 (40.91%), Postives = 111/198 (56.06%), Query Frame = 1
Query:  760 PQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFG--MLRPRHHCRNCGHLCCKNCT-DSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYL 1344
            P  ++   ++  + A RA EAF+ P+W   T + TC+ C + F   + R RHHCRNCG L C  C    WP   LP +Y  +   RR V VC  C S    FR AL  G   GAMEA+ TGCVNLR P +   D    +HCAAAGG+++LM WL+E++  P+     +   +P L    RS +A AA   R++++RYL
Sbjct:  486 PTPLVCGKFATSYEADRAAEAFSSPVWHEPTPNSTCAECQSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERR-VRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS---DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMD--DEKTMPHLDGAGRSVMAAAADSGRVEMMRYL 677          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A7S4NIR4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NIR4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.190e-28
Identity = 110/454 (24.23%), Postives = 168/454 (37.00%), Query Frame = 1
Query:  664 PFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAP------DGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGLLVP--------VLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIADTADLCRIVEKLV----------VEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPATAALSPF--------PPSPQDATVFSHGPSAPPPEDPAFRSASYHRYDGGYGGAYAGGGDGXXGAYXXXXXXXXXXXXXXXXXXGGSSVSGRAAAAAAAMNEECVVCMNSAIHVTFVPCGHQSCCRLCGPLFSECPVC 1929
            P+ VT +  +G W A V   ++  +      A + +    + D   A  A EA+APP   P  ++ TC  C   F +LR   HCRNCG   C  C+  WP+  +P T+    +    V VC  C   +  FR+AL  G+   A   ++TG +NL     W+P      +  Y +HCAA GG+ +   WL+E Q  P++ + A              +LT   RS L +A +   +D++RYL+ ERG     I +       ++ ++          V  G                                 S +T+   P+        P SP DA +F         ED    + + +  D                                                 A+  +EC++C    I     PCGHQ CC  C   F+ECP+C
Sbjct:  126 PYEVTHNPTSGLWVATVHTNQKALDRGDMAAANKALEAYPFDDEGQARSAAEAWAPPRMHPFAENKTCFCCERKFALLRRPCHCRNCGVCVCSKCSTQWPSRMIPGTFNIKGESM--VHVCGPCDWLSGAFREALLEGNHDRAFALHATGNINL-----WSPFCNLKGEEFYPVHCAAMGGNTSTFRWLIEHQHCPITSSLAGRKKKSGRADANRSLLTSKGRSVLDIAVSKQHVDVLRYLVVERGVSILGIQELRTALLTLDTVLRRLPPENDPSVNAGFSSGIESSPRPESWSSSAAFSNAGAAAAMSALDSTSTSDREPYGTAVAAAGPISPTDAALFQMA------EDVPQMAHTENSED-----------------------------------------------KKASDEDECIICFEREIDCVATPCGHQMCCLECSSGFTECPIC 519          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A1Z5JSH8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSH8_FISSO)

HSP 1 Score: 130 bits (328), Expect = 2.030e-27
Identity = 87/257 (33.85%), Postives = 125/257 (48.64%), Query Frame = 1
Query:  652 KKLGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVAL---RACEAFAPPIWAP---KTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAP-DGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGL------LVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIAD 1383
            + L P++V  +  T  W   +    Q  + A  RN    I   N S R   L    A  AFA   W P   K K   C +C + F +LR   HCRNCG + CK C+ +WP+  +P TY     +  SV+VC  C   ++ FR AL  G+   A+  ++TG +NL  P      + +Y +H A  GGSL L+ WLV+E   P+     +G        +P++T   RS L +A  +  +D+VRYLI E+G   A   D
Sbjct:  591 RTLLPWSVIPNSATNTWTTTI----QTNQNALDRNDRMSIAEANKSLRAFVLPTEEAAVAFAR-AWTPPRMKEKGPNCHICNSKFALLRRPCHCRNCGVVVCKECSVNWPSKMIPDTYNI--KKESSVNVCRSCDWLSSNFRLALLQGNQDRAVALHATGNINLHAPFGNVKGELLYPVHSAVLGGSLPLLKWLVDENSCPIKSLRVSGSREYGGSYIPIVTSKGRSLLGIALENRNVDIVRYLIVEKGVALASEKD 840          
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Match: A0A1Z5KGM8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGM8_FISSO)

HSP 1 Score: 130 bits (327), Expect = 2.720e-27
Identity = 86/257 (33.46%), Postives = 127/257 (49.42%), Query Frame = 1
Query:  652 KKLGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVNYSDRHVAL---RACEAFAPPIWAP---KTKDGTCSLCGAGFGMLRPRHHCRNCGHLCCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDLAGAMEAYSTGCVNLRTPHAWAP-DGMYSIHCAAAGGSLTLMTWLVEEQGVPLSFAAANGL------LVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIAD 1383
            + L P++V  +  T  W A +    Q  + A  R+    I   N S R   L   +A  AFA   W P   K K   C +C + F +LR   HCRNCG + CK C+ +WP+  +P TY     +  SV+VC  C   ++ FR AL  G+   A+  ++TG +NL  P      + +Y +H A  GGSL L+ WLV++   P+     +G        +PV+T   RS L +A  +  +D+VRYL+ E+G   A   D
Sbjct:  600 RTLLPWSVIPNSATNTWTATI----QTNQNALERSDRMSIAEANKSLRAFVLPTEKAAVAFAR-AWTPPRMKEKGPHCHICNSKFALLRRPCHCRNCGVVVCKECSVNWPSKMIPDTYNI--KKESSVNVCGSCDWLSSNFRLALLKGNQDRAVALHATGNINLHAPFGNVKGELLYPVHSAVLGGSLPLLKWLVDDNSCPIKSLRVSGSREYGGSYIPVVTSKGRSLLGIALENRNVDIVRYLVVEKGVALASEKD 849          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig723.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A7S3YF48_HETAK5.330e-4731.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KTC5_9PHAE2.750e-3939.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482RTU5_9ARCH5.350e-3837.16FYVE-type domain-containing protein (Fragment) n=1... [more]
A0A836CC14_9STRA1.370e-3640.61FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
D8LDM9_ECTSI2.940e-3442.20FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUU5_9PHAE6.820e-3240.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF4_ECTSI1.830e-3140.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4NIR4_9STRA4.190e-2824.23Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5JSH8_FISSO2.030e-2733.85Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5KGM8_FISSO2.720e-2733.46Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig723contigP-wetherbeei_contig723:651..3643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYF4
PFAMsBBL5,Cbl_N2,FHA,GIDE,SAM_1,SH2,zf-C3HC4_3
Model size2505
Max annot lvl2759|Eukaryota
KEGG koko:K15688
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0030587,GO:0032502,GO:0035556,GO:0044424,GO:0044444,GO:0044464,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051703,GO:0051704,GO:0051716,GO:0065007,GO:0090702,GO:0099120
Exons3
Evalue8.95e-33
EggNOG OGsKOG1571@1|root,KOG1571@2759|Eukaryota
EC2.3.2.27
Descriptionnegative regulation of chemokine (C-C motif) ligand 5 production
Cds size1944
COG categoryS
BRITEko00000,ko01000,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186967.08114-UTR-P-wetherbeei_contig723:650..11781683186967.08114-UTR-P-wetherbeei_contig723:650..1178Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig723 651..1178 -
1683186967.1185596-UTR-P-wetherbeei_contig723:3610..36431683186967.1185596-UTR-P-wetherbeei_contig723:3610..3643Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig723 3611..3643 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186967.0919752-CDS-P-wetherbeei_contig723:1178..19431683186967.0919752-CDS-P-wetherbeei_contig723:1178..1943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig723 1179..1943 -
1683186967.100881-CDS-P-wetherbeei_contig723:2187..24881683186967.100881-CDS-P-wetherbeei_contig723:2187..2488Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig723 2188..2488 -
1683186967.1098795-CDS-P-wetherbeei_contig723:2732..36101683186967.1098795-CDS-P-wetherbeei_contig723:2732..3610Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig723 2733..3610 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig723.1.1prot_P-wetherbeei_contig723.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig723 1179..3610 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig723.1.1

>prot_P-wetherbeei_contig723.1.1 ID=prot_P-wetherbeei_contig723.1.1|Name=mRNA_P-wetherbeei_contig723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=648bp
MATMSPVQSSTPNYSTREVVSSAPPGAMSCSPALATSTTAASPLHGQSPV
TEADLSLATRLVEGQMDMLSFSRAMALLHEPPAAAETSLAPSRLALEPAA
ALSSPPKGVSRVTSPARSAATMPVHVPPQPVWATATEVTLPPSPPPPPLP
PQEIFFQLDEVRCPVPTVSPPEPRPPSPSAGSFGVAPQPPPCTDGSSSSS
SLRSRRKKLGPFAVTLDDNTGRWKALVGMPKQDAEAARRRNAPQQILGVN
YSDRHVALRACEAFAPPIWAPKTKDGTCSLCGAGFGMLRPRHHCRNCGHL
CCKNCTDSWPAAALPSTYLDADDRRRSVSVCAVCRSANAKFRDALRCGDL
AGAMEAYSTGCVNLRTPHAWAPDGMYSIHCAAAGGSLTLMTWLVEEQGVP
LSFAAANGLLVPVLTRDRRSALAVAAAHDRIDLVRYLIRERGCRSAEIAD
TADLCRIVEKLVVEGGGGAGASRGANGGGGSCLGSGGGGGSGGGGGRGGS
PATAALSPFPPSPQDATVFSHGPSAPPPEDPAFRSASYHRYDGGYGGAYA
GGGDGGGGAYGGADGGGGAYGGADGGGGGGSSVSGRAAAAAAAMNEECVV
CMNSAIHVTFVPCGHQSCCRLCGPLFSECPVCMAPITQVMNTYKVGA*
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mRNA from alignment at P-wetherbeei_contig723:651..3643-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig723.1.1 ID=mRNA_P-wetherbeei_contig723.1.1|Name=mRNA_P-wetherbeei_contig723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2993bp|location=Sequence derived from alignment at P-wetherbeei_contig723:651..3643- (Phaeothamnion wetherbeei SAG_119_79)
TTGAAAATAAAACCTCGTGACACCTAGCAAAATATGGCCACAATGTCGCC GGTGCAGTCCTCGACCCCAAACTATTCGACCCGAGAGGTGGTTTCATCAG CGCCTCCTGGCGCTATGTCTTGTTCCCCAGCACTAGCCACATCTACCACA GCAGCATCACCATTGCATGGCCAAAGCCCCGTCACGGAAGCCGATCTCTC GCTTGCGACGCGGCTGGTTGAAGGGCAGATGGACATGCTTTCTTTCAGCA GAGCCATGGCGCTACTGCATGAGCCGCCCGCAGCCGCTGAGACGAGCCTC GCGCCGTCGCGTTTGGCTTTAGAACCTGCAGCTGCTCTGTCGTCACCGCC GAAGGGCGTGTCAAGGGTGACCAGCCCGGCGCGGTCCGCCGCTACGATGC CAGTCCACGTGCCCCCGCAGCCTGTATGGGCAACCGCGACGGAGGTGACG CTGCCGCCGTCGCCGCCGCCGCCGCCGCTGCCACCGCAAGAGATATTTTT CCAGCTGGACGAGGTGCGCTGTCCTGTTCCGACCGTTTCGCCGCCAGAAC CACGGCCGCCATCGCCGTCAGCCGGATCGTTTGGGGTCGCGCCGCAGCCG CCGCCCTGCACGGACGGTTCATCGTCGTCGTCGTCGTTGCGGTCGCGCCG CAAGAAGCTGGGGCCCTTCGCGGTGACGCTCGACGACAACACGGGCCGCT GGAAGGCCCTCGTCGGCATGCCGAAGCAGGATGCCGAAGCGGCGCGGCGG CGCAATGCGCCCCAGCAGATCTTGGGCGTTAACTATTCCGACCGGCACGT GGCCCTGCGGGCCTGCGAGGCATTCGCGCCGCCAATTTGGGCGCCAAAAA CGAAGGACGGTACATGCAGCCTCTGCGGCGCCGGCTTCGGCATGCTTCGC CCGCGCCACCAGTGAGTTTGGGTGTGTTTCTAAATATCTTGTTCGGTACG AGATGCACTAAGTCAAATATCCTTCTCCCGTGGTTTCCGGTTCCATGCGA AGTGATTTATTGTGTACCTCTCCTTGTGCTTTTCTGGCTCAGGCTTCGAA CATCTTTTAGACTATTTTCGCCTTTCTTCGATAGAAGTGATCAAACGTGC CTGTGGTTCAAACCGCCTTTTTCCCTGTATTACCATCCCGTGCCCGCCGC CGCAGCTGCCGGAACTGCGGCCACCTCTGCTGCAAGAACTGCACGGATAG CTGGCCGGCGGCAGCCCTCCCCTCCACCTACCTCGACGCCGACGACCGCC GGCGCTCCGTTAGCGTATGTGCCGTCTGTCGCAGTGCCAACGCCAAGTTC CGGGACGCGCTGCGCTGCGGCGACCTAGCCGGGGCGATGGAGGCGTACTC AACGGGATGCGTCAACCTGCGGACTCCACATGCGTGGGCGCCGGACGGCA TGTACTCAATCCACTGCGCCGCGGCCGGCGGCTCGCTGACGCTCATGACC TGGCTCGTGAGTGTTGTCATCATTCTGGTGGCTATTTGTTTACCTCTTCA TTCTCTCCCAGTTCTAATCTGGCGAGCAGGGACAGCAGCTTTGGAGCGCA TTTGCATTTCACGTCCTCTTGAAGGGATCAATGAGTCCTATCCTTTGTCC CCAAAAGCTGTGTTCTGTATAAATCCCAAACAAGATTCAACTCGATGCCC CAACGCAACGCTCTAACGTGTTCGTGCTCTTATTTTCTGCTTGTGCACAG GTGGAGGAGCAGGGCGTGCCGCTGTCCTTCGCCGCCGCCAACGGCCTGCT CGTGCCCGTGCTAACGCGTGACCGCCGGTCGGCACTGGCCGTGGCGGCCG CCCACGACCGCATCGACCTCGTGCGCTACCTCATCCGCGAGCGCGGCTGT CGCTCCGCCGAAATCGCCGACACGGCAGACCTCTGCCGCATTGTCGAAAA GCTCGTCGTGGAAGGCGGTGGCGGCGCCGGTGCGAGCAGAGGCGCGAACG GAGGCGGCGGCAGTTGCCTTGGCAGTGGCGGCGGCGGCGGCAGTGGCGGC GGCGGCGGCAGGGGCGGGTCGCCGGCCACCGCCGCATTGAGTCCGTTCCC GCCGAGCCCGCAGGACGCCACTGTCTTCTCGCACGGCCCTTCGGCTCCGC CACCGGAGGACCCGGCATTCCGATCCGCGAGCTACCACCGGTACGATGGC GGGTACGGCGGTGCGTACGCCGGCGGCGGCGACGGCGGCGGCGGCGCGTA CGGCGGTGCCGACGGCGGTGGCGGCGCGTACGGCGGTGCCGACGGCGGTG GCGGCGGCGGAAGCTCTGTCAGCGGCCGCGCAGCAGCAGCGGCTGCGGCG ATGAACGAGGAATGCGTCGTGTGTATGAACAGTGCGATCCACGTCACCTT CGTGCCCTGTGGCCACCAAAGCTGCTGCCGATTATGCGGACCCCTTTTTT CAGAATGTCCAGTTTGCATGGCCCCCATCACGCAGGTAATGAACACGTAC AAAGTTGGCGCCTAGATGAGGGAGGAGACAGCGCCGATGGACAAGATACG GCGGCGCGTCTAGCAGAGTGGTGGTTCCCGGTGCCGGAGTCGCTGCTGGA TGTTGCCGGTGGTCCGTTGGCGGCAGCAGCTGCCCGCTGGCTGGCAGCGG TGGCGGAGGCGGTGGGAATGGCGGGAATGGCGGCTACGGTGGCGGCGGCA GCAGCAGGCGGCAAGCCCATCCTTCGATGTACATACACGGGATTCTTCGC GGCGGCGGAGCATTACTCTTTTCCTTTTGTAGCGGTGGTGGTGACAGCTG TGGGCATGGCGGCGGCGATGGCGGCATTCAAATCATCGTGTAAGCGTTTG AATGGTACGGGAAGAAGCGCTTCTTCATAGCATAAAAAGGCATGAGGGGC GAGCGAAAGCATTTTCAAGTTTGTGCTGTCGCCAGGGGGCTCCGAGCAGA GATTCGGCACGAAAAATTCCAACCGAAGGGGGGTTGGTTTTTATTCCCCT CGTGAAACTCTAAAAAGACTCCGACCTAATATAAGCCATCTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig723:651..3643-

>mRNA_P-wetherbeei_contig723.1.1 ID=mRNA_P-wetherbeei_contig723.1.1|Name=mRNA_P-wetherbeei_contig723.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1944bp|location=Sequence derived from alignment at P-wetherbeei_contig723:651..3643- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCACAATGTCGCCGGTGCAGTCCTCGACCCCAAACTATTCGACCCG
AGAGGTGGTTTCATCAGCGCCTCCTGGCGCTATGTCTTGTTCCCCAGCAC
TAGCCACATCTACCACAGCAGCATCACCATTGCATGGCCAAAGCCCCGTC
ACGGAAGCCGATCTCTCGCTTGCGACGCGGCTGGTTGAAGGGCAGATGGA
CATGCTTTCTTTCAGCAGAGCCATGGCGCTACTGCATGAGCCGCCCGCAG
CCGCTGAGACGAGCCTCGCGCCGTCGCGTTTGGCTTTAGAACCTGCAGCT
GCTCTGTCGTCACCGCCGAAGGGCGTGTCAAGGGTGACCAGCCCGGCGCG
GTCCGCCGCTACGATGCCAGTCCACGTGCCCCCGCAGCCTGTATGGGCAA
CCGCGACGGAGGTGACGCTGCCGCCGTCGCCGCCGCCGCCGCCGCTGCCA
CCGCAAGAGATATTTTTCCAGCTGGACGAGGTGCGCTGTCCTGTTCCGAC
CGTTTCGCCGCCAGAACCACGGCCGCCATCGCCGTCAGCCGGATCGTTTG
GGGTCGCGCCGCAGCCGCCGCCCTGCACGGACGGTTCATCGTCGTCGTCG
TCGTTGCGGTCGCGCCGCAAGAAGCTGGGGCCCTTCGCGGTGACGCTCGA
CGACAACACGGGCCGCTGGAAGGCCCTCGTCGGCATGCCGAAGCAGGATG
CCGAAGCGGCGCGGCGGCGCAATGCGCCCCAGCAGATCTTGGGCGTTAAC
TATTCCGACCGGCACGTGGCCCTGCGGGCCTGCGAGGCATTCGCGCCGCC
AATTTGGGCGCCAAAAACGAAGGACGGTACATGCAGCCTCTGCGGCGCCG
GCTTCGGCATGCTTCGCCCGCGCCACCACTGCCGGAACTGCGGCCACCTC
TGCTGCAAGAACTGCACGGATAGCTGGCCGGCGGCAGCCCTCCCCTCCAC
CTACCTCGACGCCGACGACCGCCGGCGCTCCGTTAGCGTATGTGCCGTCT
GTCGCAGTGCCAACGCCAAGTTCCGGGACGCGCTGCGCTGCGGCGACCTA
GCCGGGGCGATGGAGGCGTACTCAACGGGATGCGTCAACCTGCGGACTCC
ACATGCGTGGGCGCCGGACGGCATGTACTCAATCCACTGCGCCGCGGCCG
GCGGCTCGCTGACGCTCATGACCTGGCTCGTGGAGGAGCAGGGCGTGCCG
CTGTCCTTCGCCGCCGCCAACGGCCTGCTCGTGCCCGTGCTAACGCGTGA
CCGCCGGTCGGCACTGGCCGTGGCGGCCGCCCACGACCGCATCGACCTCG
TGCGCTACCTCATCCGCGAGCGCGGCTGTCGCTCCGCCGAAATCGCCGAC
ACGGCAGACCTCTGCCGCATTGTCGAAAAGCTCGTCGTGGAAGGCGGTGG
CGGCGCCGGTGCGAGCAGAGGCGCGAACGGAGGCGGCGGCAGTTGCCTTG
GCAGTGGCGGCGGCGGCGGCAGTGGCGGCGGCGGCGGCAGGGGCGGGTCG
CCGGCCACCGCCGCATTGAGTCCGTTCCCGCCGAGCCCGCAGGACGCCAC
TGTCTTCTCGCACGGCCCTTCGGCTCCGCCACCGGAGGACCCGGCATTCC
GATCCGCGAGCTACCACCGGTACGATGGCGGGTACGGCGGTGCGTACGCC
GGCGGCGGCGACGGCGGCGGCGGCGCGTACGGCGGTGCCGACGGCGGTGG
CGGCGCGTACGGCGGTGCCGACGGCGGTGGCGGCGGCGGAAGCTCTGTCA
GCGGCCGCGCAGCAGCAGCGGCTGCGGCGATGAACGAGGAATGCGTCGTG
TGTATGAACAGTGCGATCCACGTCACCTTCGTGCCCTGTGGCCACCAAAG
CTGCTGCCGATTATGCGGACCCCTTTTTTCAGAATGTCCAGTTTGCATGG
CCCCCATCACGCAGGTAATGAACACGTACAAAGTTGGCGCCTAG
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