mRNA_P-wetherbeei_contig7203.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7203.2.1
Unique NamemRNA_P-wetherbeei_contig7203.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S2W6I3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.760e-31
Identity = 73/149 (48.99%), Postives = 87/149 (58.39%), Query Frame = 1
Query:    1 EGAFAVHGVLSKRERESVIAVAERMGFLVYDAGKNTHGALTWLLDA-AHAEELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVD------DGYADGDASV-------MRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            +G F +H VLS  E E +I+VAE +GF   DAGKNT GALTWLLD  A    LF RC PFLP +    G +       G+N RCR YRYQPN  D      D  + G   V       +R+DA+   R S L+FLLYLNDDF+GG TTF
Sbjct:   86 QGCFMLHSVLSSLECEQIISVAETIGFKDVDAGKNTQGALTWLLDEEALLGPLFHRCQPFLPAIGPAAGGDL-----AGLNARCRFYRYQPNSKDTFRPHLDDSSPGSGFVPGSNKRELRFDAFAGDRTSQLSFLLYLNDDFAGGETTF 229          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S4U9E0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4U9E0_GUITH)

HSP 1 Score: 100 bits (249), Expect = 8.900e-23
Identity = 65/151 (43.05%), Postives = 82/151 (54.30%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGFLVYDAGKNTHGALTWLLDAAHA-EELFRRCLPFLPQL--PLRPGKNQPLMAPVGINRRCRLYRYQPNGV-------DDGYA-------DGDASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GA  +H VLS+ E    I ++E MG+  +D  KNTH A+TW+ D  +    LF RC PFLP +   LR G  + L    G+N R R YRYQP+G        DD +         GD  V  WD  G    S+LTFLLYL+DDF GG T+F
Sbjct:  102 GAMLLHDVLSREECAKAIILSEAMGYQEHDLLKNTHAAVTWVADLENVIRPLFLRCKPFLPSILDNLRGGAARQLR---GLNARLRCYRYQPDGHQTFRLHRDDSFPMSSLDRHHGDRLV--WDVSGGSESSVLTFLLYLSDDFEGGHTSF 247          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S0HUF4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUF4_9CRYP)

HSP 1 Score: 95.1 bits (235), Expect = 1.040e-20
Identity = 63/151 (41.72%), Postives = 81/151 (53.64%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGFLVYDAGKNTHGALTWLLDAAHA-EELFRRCLPFLPQL--PLRPGKNQPLMAPVGINRRCRLYRYQPNGV-------DDGYA-------DGDASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GA  +H VLSK E    I ++E MG+  +D  KNTH A+TW+ D  +  + LF RC PFLP +   L  G  + L    G+N R R YRYQP+G        DD +         GD  V  WD       S+LTFLLYL+D+F GG T+F
Sbjct:  110 GALLLHDVLSKEECLQAIVLSEAMGYQEHDLMKNTHAAVTWVADLENVVQPLFLRCQPFLPAILESLGGGAARQLR---GLNARLRCYRYQPDGHQTFRLHRDDSFPMSSLDRHHGDRLV--WDVSRGAESSVLTFLLYLSDEFDGGHTSF 255          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S0W000_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W000_9CRYP)

HSP 1 Score: 89.7 bits (221), Expect = 1.120e-18
Identity = 59/148 (39.86%), Postives = 76/148 (51.35%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGFLVYDAGKNTHGALTWLLDA-AHAEELFRRCLPFLPQ-LPLRPGKNQPLMAPVGINRRCRLYRYQPNG-------VDDGYADGD-----ASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GA  VH VLS  E E V+ + E  G+  Y+  KNTH  +TW+    A  + L+ R    LP  LP R  K +  +   G+N R R YRYQP+G       +DD +          + M WD  G    S+LTFLLYL DDF GG+T F
Sbjct:  140 GAVLVHKVLSDSECEEVVRLTEDFGYKEYNLTKNTHATVTWVASREAIVQPLYERIRSSLPSVLPSRDFKRERQIT--GLNGRLRCYRYQPDGTQTFRKHLDDSFFSSGIDRPGGNRMLWDDSGGKSTSVLTFLLYLTDDFEGGSTVF 285          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S1HMR4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMR4_HEMAN)

HSP 1 Score: 86.7 bits (213), Expect = 1.810e-17
Identity = 57/148 (38.51%), Postives = 75/148 (50.68%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGFLVYDAGKNTHGALTWLLDA-AHAEELFRRCLPFLPQ-LPLRPGKNQPLMAPVGINRRCRLYRYQPNGV--------DDGYADG----DASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GA  +H VL+  E E V+ + E  G+  Y+  KNTH  +TW+    A    L+ R    LP+ LP R  K++  +   G+N R R YRYQP+G         D  Y+ G      + M WD       S+LTFLLYL DDF GG T F
Sbjct:  148 GAVMLHKVLTDSECEEVVKLTEEFGYKEYNLTKNTHATVTWVASREAVVNPLYERIKESLPRVLPSRDFKSERQIT--GLNGRLRCYRYQPDGAQTFRKHLDDSFYSSGIDKPGGNKMLWDDCDGTSTSVLTFLLYLTDDFEGGCTVF 293          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S0QFM9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QFM9_9CRYP)

HSP 1 Score: 80.5 bits (197), Expect = 3.280e-16
Identity = 53/114 (46.49%), Postives = 62/114 (54.39%), Query Frame = 1
Query:   94 AGKNTHGA--LTWLLDAAHAEELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVDDGYADGD--------ASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            AG+  HG   +TWLLDA   + +F RC P LP    R GK        GIN R R YRY P  V   + DG             ++DAYGD R S LTFL+YLNDDF GG+TTF
Sbjct:   11 AGEGGHGISLVTWLLDAPLLQGIFSRCEPHLPP-DFRGGKL------AGINARWRFYRYSPGVVYRPHVDGGWPGSGLAADGTYQYDAYGD-RTSRLTFLVYLNDDFEGGSTTF 116          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A086TMK7_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Podila verticillata NRRL 6337 TaxID=1069443 RepID=A0A086TMK7_9FUNG)

HSP 1 Score: 78.2 bits (191), Expect = 3.160e-14
Identity = 53/151 (35.10%), Postives = 72/151 (47.68%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGFL----VYDAGKNTHGALT----WLLDAAHAEELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVDDGYADGD---------ASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GAF +  VL+++E   +I+ AE +GF     +      +   L     W+ D    + +F RC P  P+     G  Q     VGIN R R+YRY P  +   + DG               +DAYG  R S LTFL+YLND+F GG TTF
Sbjct:  281 GAFLLKDVLTRKECHQMISAAEAIGFTPDVPIVGTASESISVLAHNFFWMADDQLLKHIFDRCKPHFPETS---GDGQ---GAVGINSRWRVYRYVPGAIYRIHVDGQWPGSGLDPVTGEYLYDAYGGTRWSRLTFLVYLNDEFEGGGTTF 425          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A7S0SHI0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHI0_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 6.760e-14
Identity = 58/148 (39.19%), Postives = 76/148 (51.35%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGF-------LVYDAGKNTHGALTWLLDAAHAEELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVDDGYADGD-------ASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GAF +  VL+ RE E ++AV+E MG+       L  D   N   + TW+ D      +++R    LP  P   G      A VGIN R RLY+Y  + V   + DG           ++ DAYGD R S L+FL+YLNDD  GGATTF
Sbjct:   88 GAFVLSNVLTPRECEQLLAVSEAMGYCDDAPVSLGRDIRHNE--SCTWIADDTITAPIYQRVARLLP--PEVAGG-----AVVGINGRFRLYKYNTDDVFRPHTDGSWPGTGVVNGRVKTDAYGD-RWSQLSFLIYLNDDMEGGATTF 225          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: R1CSC8_EMIHU (Fe2OG dioxygenase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CSC8_EMIHU)

HSP 1 Score: 73.9 bits (180), Expect = 1.720e-13
Identity = 54/148 (36.49%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGF-----LVYDAGKNTHGALTWLLDAAHAEELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVDDGYADG---------DASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GAF +HGVL + E  +++ +A+RMGF     +   A   T G   WL DA+    +F R  P LP   +  G+ +      GIN R RL+ Y+   +   + DG         D   +  D +G   RS LTFL+YLND F GG TTF
Sbjct:   19 GAFLLHGVLGREEAAAILRLAQRMGFRTDHPVSRPAPSPTRGC-EWLADASLLGPMFARASPLLPA-EVGGGRLE------GINPRWRLFEYRRGAIYRPHIDGSWPMGGLDQDGGYVH-DLHGAAVRSRLTFLVYLNDGFDGGCTTF 157          
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Match: A0A8H7Q8B9_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q8B9_9FUNG)

HSP 1 Score: 75.9 bits (185), Expect = 2.010e-13
Identity = 52/151 (34.44%), Postives = 75/151 (49.67%), Query Frame = 1
Query:    4 GAFAVHGVLSKRERESVIAVAERMGFL----VYDAGKNTHGALT----WLLDAAHAEELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVDDGYADG---------DASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF 405
            GAF +  VL+  E + V++ AE +GF        A  ++   L     WL+D      +F+RC P  P+  +  G      A VG+N R R+YRY P  +   + DG         +    ++D Y + R S LTFLLYLN++F GG TTF
Sbjct:  262 GAFMITNVLTSSECDQVLSAAESIGFTPDVPAVGAAVDSVSVLAHNFFWLVDDDFLGTIFKRCEPHFPK-EIGGG------AVVGVNSRWRVYRYVPGAIYRPHIDGAWPGSGLDPEDGTYKYDMYNNTRWSRLTFLLYLNEEFEGGPTTF 405          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7203.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2W6I3_9STRA2.760e-3148.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4U9E0_GUITH8.900e-2343.05Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0HUF4_9CRYP1.040e-2041.72Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0W000_9CRYP1.120e-1839.86Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1HMR4_HEMAN1.810e-1738.51Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0QFM9_9CRYP3.280e-1646.49Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A086TMK7_9FUNG3.160e-1435.10Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S0SHI0_9CHLO6.760e-1439.19Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
R1CSC8_EMIHU1.720e-1336.49Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A8H7Q8B9_9FUNG2.010e-1334.44Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7203contigP-wetherbeei_contig7203:1583..2231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog78898.MVEG_11219T0
PFAMs2OG-FeII_Oxy_3
Model size405
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.18e-15
EggNOG OGs28PIZ@1|root,2QW74@2759|Eukaryota,38H8N@33154|Opisthokonta,3NYUT@4751|Fungi
Descriptionprolyl 4-hydroxylase
Cds size405
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186965.514821-CDS-P-wetherbeei_contig7203:1582..17031683186965.514821-CDS-P-wetherbeei_contig7203:1582..1703Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7203 1583..1703 -
1683186965.530846-CDS-P-wetherbeei_contig7203:1947..22311683186965.530846-CDS-P-wetherbeei_contig7203:1947..2231Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7203 1948..2231 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7203.2.1prot_P-wetherbeei_contig7203.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7203 1583..2231 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7203.2.1

>prot_P-wetherbeei_contig7203.2.1 ID=prot_P-wetherbeei_contig7203.2.1|Name=mRNA_P-wetherbeei_contig7203.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
EGAFAVHGVLSKRERESVIAVAERMGFLVYDAGKNTHGALTWLLDAAHAE
ELFRRCLPFLPQLPLRPGKNQPLMAPVGINRRCRLYRYQPNGVDDGYADG
DASVMRWDAYGDGRRSLLTFLLYLNDDFSGGATTF
back to top

mRNA from alignment at P-wetherbeei_contig7203:1583..2231-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7203.2.1 ID=mRNA_P-wetherbeei_contig7203.2.1|Name=mRNA_P-wetherbeei_contig7203.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=649bp|location=Sequence derived from alignment at P-wetherbeei_contig7203:1583..2231- (Phaeothamnion wetherbeei SAG_119_79)
GAAGGCGCCTTTGCCGTCCACGGCGTCCTCTCCAAGCGCGAGCGAGAGAG CGTCATCGCCGTCGCCGAGCGGATGGGCTTTCTCGTCTATGACGCTGGCA AAAACACCCACGGCGCATTGACATGGCTTCTGGACGCCGCGCATGCCGAG GAGCTCTTCCGGCGCTGCCTCCCTTTTCTGCCGCAGCTTCCGCTGCGGCC GGGCAAAAACCAACCGCTGATGGCGCCGGTCGGCATCAACCGGCGGTGCC GCCTGTACCGATACCAACCGAACGGCGTGGACGAGTTCCGACCGCACGTC GATGATAGGCAAGCTGATCGATCGGATGCTTGTCGATTGGTTGAACTTAG TTTGACTCTTTCGTGGCAGAGTGGGTTGCGCTTTGTTTAAAAACGCATTA ACCTGCTATGCTACTGCTTGGGAAAACTCGAAGGGTAGCCAGTTCGTTGA CGCCATCAGAGCAGCTCGGAGTTGATGAACCCGAATGATGTGCAAAACCT GTCGATCCACCGGCAGTTTTCCGGGAAGCGGTTACGCCGACGGCGACGCC AGCGTCATGCGGTGGGACGCGTACGGCGACGGCCGCCGGAGCCTTCTCAC CTTCCTCCTGTACCTCAACGACGACTTCAGCGGCGGCGCCACTACCTTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7203:1583..2231-

>mRNA_P-wetherbeei_contig7203.2.1 ID=mRNA_P-wetherbeei_contig7203.2.1|Name=mRNA_P-wetherbeei_contig7203.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig7203:1583..2231- (Phaeothamnion wetherbeei SAG_119_79)
GAAGGCGCCTTTGCCGTCCACGGCGTCCTCTCCAAGCGCGAGCGAGAGAG
CGTCATCGCCGTCGCCGAGCGGATGGGCTTTCTCGTCTATGACGCTGGCA
AAAACACCCACGGCGCATTGACATGGCTTCTGGACGCCGCGCATGCCGAG
GAGCTCTTCCGGCGCTGCCTCCCTTTTCTGCCGCAGCTTCCGCTGCGGCC
GGGCAAAAACCAACCGCTGATGGCGCCGGTCGGCATCAACCGGCGGTGCC
GCCTGTACCGATACCAACCGAACGGCGTGGACGACGGTTACGCCGACGGC
GACGCCAGCGTCATGCGGTGGGACGCGTACGGCGACGGCCGCCGGAGCCT
TCTCACCTTCCTCCTGTACCTCAACGACGACTTCAGCGGCGGCGCCACTA
CCTTC
back to top