mRNA_P-wetherbeei_contig7202.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7202.3.1
Unique NamemRNA_P-wetherbeei_contig7202.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A7S4F3G2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3G2_CHRCT)

HSP 1 Score: 62.8 bits (151), Expect = 1.400e-7
Identity = 31/46 (67.39%), Postives = 34/46 (73.91%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAASG 141
            WR V +DDRIP DA G PL+PVS    ELWPLLLAKAL+KV   SG
Sbjct:  196 WRFVLVDDRIPFDADGAPLVPVSNASLELWPLLLAKALYKVSVRSG 241
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: E9J2A0_SOLIN (Calpain catalytic domain-containing protein (Fragment) n=1 Tax=Solenopsis invicta TaxID=13686 RepID=E9J2A0_SOLIN)

HSP 1 Score: 57.8 bits (138), Expect = 3.070e-7
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKV 126
            WRR+T+DD IPVD  G PLLP + +  ELWP+LLAKAL K+
Sbjct:   19 WRRITVDDIIPVDKNGRPLLPCTSNNSELWPMLLAKALLKI 59
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: UPI000614B43C (androglobin-like n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000614B43C)

HSP 1 Score: 59.3 bits (142), Expect = 1.170e-6
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVC 129
            WRR+ IDD IPV+A GVPLLP +    ELWP+LL+KAL K+C
Sbjct:  116 WRRIVIDDMIPVNAEGVPLLPRTSKNFELWPMLLSKALLKLC 157
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A507E8C8_9FUNG (Calpain catalytic domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E8C8_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 1.550e-6
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAASGVD 147
            WRRVT+DDRIPVDA G PL+  S    E+WP+LL KAL KV A+S  D
Sbjct:  327 WRRVTVDDRIPVDAEGKPLVVSSPVTHEIWPMLLTKALLKVVASSYKD 374
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A1S8VIA7_9FUNG (Calpain catalytic domain-containing protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VIA7_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.730e-6
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAASGVDCAAAGEA 168
            WR++TIDDRIPVD+ G PLL +S    E+WP+LL KAL KV   S  +C    EA
Sbjct:  412 WRKITIDDRIPVDSIGKPLLIMSPQITEIWPMLLCKALMKVANTSYKECYGMSEA 466
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A833W3Z1_9HYME (Calpain catalytic domain-containing protein n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=A0A833W3Z1_9HYME)

HSP 1 Score: 57.8 bits (138), Expect = 1.800e-6
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAASGVDC 150
            WRR+ +DD IPV+    PLLP + +  ELWP+LLAKAL K+C+ +  DC
Sbjct:  112 WRRILVDDMIPVNEEKTPLLPRTGNDFELWPMLLAKALLKLCSLTWTDC 160
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A1Y2HIX4_9FUNG (Calpain catalytic domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HIX4_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 2.050e-6
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAASGVD 147
            WR++ +DD+IPVD  G PLLP S  P E+WP ++ KA+ KVCA S  D
Sbjct:   44 WRKILVDDKIPVDEKGEPLLPTSPVPGEIWPWVVGKAMLKVCALSYYD 91
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A507C7F7_9FUNG (Calpain catalytic domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C7F7_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 2.700e-6
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAAS 138
            WR+VTIDD+IPVD+ G PLL  S +  ELWPLLL+KAL K+ A S
Sbjct:  216 WRKVTIDDKIPVDSQGRPLLISSPEKTELWPLLLSKALIKIAALS 260
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: A0A0M0JJY1_9EUKA (Androglobin isoform 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJY1_9EUKA)

HSP 1 Score: 58.5 bits (140), Expect = 3.550e-6
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKV 126
            WR V +DDRIP DA G  LLP+S  P ELWPLLLAKAL K+
Sbjct:  107 WRLVVVDDRIPFDAHGRALLPLSSHPNELWPLLLAKALCKL 147
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BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Match: UPI000DC693CA (androglobin-like n=1 Tax=Camponotus floridanus TaxID=104421 RepID=UPI000DC693CA)

HSP 1 Score: 56.2 bits (134), Expect = 4.750e-6
Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    4 WRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKV 126
            WRR+ +DD IPVD  G PLLP + +  ELWP+LLAKAL K+
Sbjct:    4 WRRILVDDTIPVDKGGRPLLPCTSNNFELWPMLLAKALLKI 44
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7202.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4F3G2_CHRCT1.400e-767.39Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
E9J2A0_SOLIN3.070e-763.41Calpain catalytic domain-containing protein (Fragm... [more]
UPI000614B43C1.170e-664.29androglobin-like n=1 Tax=Megachile rotundata TaxID... [more]
A0A507E8C8_9FUNG1.550e-662.50Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A1S8VIA7_9FUNG1.730e-654.55Calpain catalytic domain-containing protein n=2 Ta... [more]
A0A833W3Z1_9HYME1.800e-653.06Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A1Y2HIX4_9FUNG2.050e-654.17Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A507C7F7_9FUNG2.700e-664.44Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A0M0JJY1_9EUKA3.550e-668.29Androglobin isoform 1 n=1 Tax=Chrysochromulina tob... [more]
UPI000DC693CA4.750e-660.98androglobin-like n=1 Tax=Camponotus floridanus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7202contigP-wetherbeei_contig7202:2104..3161 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog109871.XP_006679542.1
Preferred nameADGB
PFAMsGlobin,Peptidase_C2
Model size755
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564
Exons3
Evalue2.69e-06
EggNOG OGsKOG0045@1|root,KOG0045@2759|Eukaryota,38FEQ@33154|Opisthokonta
Descriptioncalcium-dependent cysteine-type endopeptidase activity
Cds size753
COG categoryOT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186965.45176-CDS-P-wetherbeei_contig7202:2103..22471683186965.45176-CDS-P-wetherbeei_contig7202:2103..2247Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7202 2104..2247 -
1683186965.4646049-CDS-P-wetherbeei_contig7202:2474..26461683186965.4646049-CDS-P-wetherbeei_contig7202:2474..2646Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7202 2475..2646 -
1683186965.4747667-CDS-P-wetherbeei_contig7202:2724..31611683186965.4747667-CDS-P-wetherbeei_contig7202:2724..3161Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7202 2725..3161 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7202.3.1prot_P-wetherbeei_contig7202.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7202 2104..3161 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7202.3.1

>prot_P-wetherbeei_contig7202.3.1 ID=prot_P-wetherbeei_contig7202.3.1|Name=mRNA_P-wetherbeei_contig7202.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
RWRRVTIDDRIPVDAAGVPLLPVSEDPRELWPLLLAKALWKVCAASGVDC
AAAGEAVAEGATGADPTAAEEAASDAANIGTDAAASSSDAGGVPAAVTAP
ASAPADAGVSAQLGDAERSVSTAEFAAFLTQCLTGWVPLSSGCSADGVGL
SGAPHLAPELFLLPELSTAPAAMDAARERQELLLRKQARFLHKNRPQKPL
TKTAVSAEEIAVIARARHGRMAEITAAIAKPRRRVSLLVAPNGRVLPLLA
I
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mRNA from alignment at P-wetherbeei_contig7202:2104..3161-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7202.3.1 ID=mRNA_P-wetherbeei_contig7202.3.1|Name=mRNA_P-wetherbeei_contig7202.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1058bp|location=Sequence derived from alignment at P-wetherbeei_contig7202:2104..3161- (Phaeothamnion wetherbeei SAG_119_79)
CGGTGGCGGCGCGTCACCATCGACGATAGGATCCCGGTGGACGCCGCTGG
CGTGCCCCTCCTGCCGGTCAGCGAGGACCCGCGGGAGCTGTGGCCCCTTT
TGCTCGCCAAGGCGTTGTGGAAGGTTTGCGCCGCTTCCGGCGTCGATTGT
GCCGCCGCTGGCGAAGCCGTCGCGGAAGGCGCCACTGGCGCGGATCCCAC
CGCGGCAGAGGAAGCTGCAAGTGACGCCGCCAACATTGGGACAGATGCCG
CCGCAAGCAGCTCTGATGCTGGCGGGGTTCCGGCAGCAGTTACGGCTCCG
GCGTCTGCCCCCGCGGACGCCGGCGTTTCCGCCCAGCTAGGCGATGCGGA
GCGCTCAGTCAGCACGGCGGAGTTCGCAGCCTTTCTCACGCAGTGCCTGA
CGGGTTGGGTGCCGCTCAGCAGCGGCTGCTCAGCAGAGTCCCTCTTGGCT
TTAAACAGCGTCTGCGGCGCCGGCGGCGCCGGTGCTGGCGCCGGCGATAG
CGGCAGTGCCCGCAGCGGCGTCGGCCTGAGCGGGGCGCCGCACCTAGCGC
CGGAGCTGTTCCTGCTGCCGGAGCTGAGCACAGCGCCGGCAGCGATGGAT
GCAGCGAGGGAGCGCCAGGAGCTGCTGCTGCGTAAGCAGGCACGGTTTCT
GCACAAGAACCGGCCCCAAAAGCCGCTGACAAAGACGGTGAGTCATCTTG
CTTTATTTGCAACCGGGTTGAGCCAGTTGGCACTGATCTATTCTTCGTTT
TGCTACCACAGCCATTCGCATCAAACGAGAGCTTTGTCCTGCCAGTTTCT
TCTGAGGTGATCTCAGAGAACAGCGAAGTAGAGGCGTCCGAGCATCCCAG
CTGATCATGTAACATCTTTATTTCTCCTACCCTCCTTTTGGCCGTTGCGT
GTGCTACTCGGCAGGCGGTATCGGCGGAGGAGATTGCTGTGATTGCCAGA
GCCCGCCACGGCCGCATGGCAGAGATTACCGCCGCCATCGCTAAGCCGCG
GCGACGCGTTTCTCTGCTGGTCGCGCCCAATGGTCGCGTGTTGCCGCTGC
TGGCCATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7202:2104..3161-

>mRNA_P-wetherbeei_contig7202.3.1 ID=mRNA_P-wetherbeei_contig7202.3.1|Name=mRNA_P-wetherbeei_contig7202.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig7202:2104..3161- (Phaeothamnion wetherbeei SAG_119_79)
CGGTGGCGGCGCGTCACCATCGACGATAGGATCCCGGTGGACGCCGCTGG
CGTGCCCCTCCTGCCGGTCAGCGAGGACCCGCGGGAGCTGTGGCCCCTTT
TGCTCGCCAAGGCGTTGTGGAAGGTTTGCGCCGCTTCCGGCGTCGATTGT
GCCGCCGCTGGCGAAGCCGTCGCGGAAGGCGCCACTGGCGCGGATCCCAC
CGCGGCAGAGGAAGCTGCAAGTGACGCCGCCAACATTGGGACAGATGCCG
CCGCAAGCAGCTCTGATGCTGGCGGGGTTCCGGCAGCAGTTACGGCTCCG
GCGTCTGCCCCCGCGGACGCCGGCGTTTCCGCCCAGCTAGGCGATGCGGA
GCGCTCAGTCAGCACGGCGGAGTTCGCAGCCTTTCTCACGCAGTGCCTGA
CGGGTTGGGTGCCGCTCAGCAGCGGCTGCTCAGCAGACGGCGTCGGCCTG
AGCGGGGCGCCGCACCTAGCGCCGGAGCTGTTCCTGCTGCCGGAGCTGAG
CACAGCGCCGGCAGCGATGGATGCAGCGAGGGAGCGCCAGGAGCTGCTGC
TGCGTAAGCAGGCACGGTTTCTGCACAAGAACCGGCCCCAAAAGCCGCTG
ACAAAGACGGCGGTATCGGCGGAGGAGATTGCTGTGATTGCCAGAGCCCG
CCACGGCCGCATGGCAGAGATTACCGCCGCCATCGCTAAGCCGCGGCGAC
GCGTTTCTCTGCTGGTCGCGCCCAATGGTCGCGTGTTGCCGCTGCTGGCC
ATC
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