prot_P-wetherbeei_contig720.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig720.2.1
Unique Nameprot_P-wetherbeei_contig720.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length200
Homology
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A521YL48_9PROT (Response regulator transcription factor n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YL48_9PROT)

HSP 1 Score: 181 bits (460), Expect = 1.510e-54
Identity = 109/208 (52.40%), Postives = 134/208 (64.42%), Query Frame = 0
Query:    1 VLIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQI------------LPDIGQPPVLTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGI 196
            VL+VDDHPIIHQTLG  V +VLP A+ H    LA     A +L+   LVLLDLGLP   G+D L RFR   P +RVA++SATE+   V AAL AGA GY+PKTSPP ++  AL++I  GG YIP Q+            L D G    +T RQ +VL LI KG SN +IA  L IA+NT KQH HA +++L V SR++AIV  ARLGI
Sbjct:    3 VLLVDDHPIIHQTLGAVVRSVLPQAQFHAESDLAGGLARARQLKNLELVLLDLGLPGCSGLDALIRFRKTLPTVRVAIISATEDPSSVRAALDAGAVGYVPKTSPPKVLANALQLIAQGGTYIPPQLMDGQLAPRKEPKLSDFG----ITDRQADVLRLIIKGRSNAEIAQELSIAENTVKQHAHAAYRSLGVNSRTEAIVELARLGI 206          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A521Z1D5_9PROT (Response regulator transcription factor n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z1D5_9PROT)

HSP 1 Score: 158 bits (399), Expect = 2.290e-45
Identity = 93/199 (46.73%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    1 VLIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQILPDIGQP---PVLTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGI 196
            +L+VDDHP+IH+     V  V      + A  L    E A   +   LVLLDL LP   GID L +F   +P  ++ V SATE+   + AA +AGA GYIPKTS PDL+VAALKV+ AGG Y+P +IL  + +      +T RQ EVL L+ +G SNR IA  L IA+ T KQH   ++QAL V SR++AI AA R G+
Sbjct:    4 ILVVDDHPMIHEIAPQVVKKVFGDVEVYSASDLNSGLECAAACKELQLVLLDLTLPGCTGIDALLKFNRKYPDTKIVVFSATEDPESIQAAFRAGAVGYIPKTSRPDLMVAALKVVAAGGKYVPSEILAGLAESNPGDQMTQRQLEVLRLMLRGLSNRQIAERLDIAEGTVKQHATDIYQALAVNSRAEAIAAARRRGL 202          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A1F6UZF9_9PROT (Uncharacterized protein n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6UZF9_9PROT)

HSP 1 Score: 145 bits (366), Expect = 2.960e-40
Identity = 93/214 (43.46%), Postives = 128/214 (59.81%), Query Frame = 0
Query:    1 VLIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQILP-DIGQPPVLTA---------------RQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGIDL 198
            +L+VDDHP++ + L  A+  +        A  L  A   AG    D L LLDLGLPD  GID L R R A P + V VVS  +++  V AAL  GA GYIPKTSP +++++A++++ +GGIY+P + L  +   PPV TA               RQ EVL L+ KG  N+ IA  L I++NT K H  +V +AL VTSR+QA++AA+RLG+ L
Sbjct:    3 ILVVDDHPMMAEALALAMRTLERETEVETAGDLRSAITAAGDNTFD-LCLLDLGLPDCSGIDALTRLRDAIPALPVVVVSGADDAANVLAALDKGAMGYIPKTSPRNVLLSAVRLVASGGIYVPTEALKREAEAPPVPTAATTSAKTAADLGMSSRQREVLELLLKGLPNKLIARKLDISENTTKIHVSSVLRALGVTSRTQALIAASRLGLRL 215          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A5C8BZ32_9BURK (Response regulator transcription factor n=1 Tax=Alicycliphilus sp. TaxID=1872437 RepID=A0A5C8BZ32_9BURK)

HSP 1 Score: 141 bits (355), Expect = 1.230e-38
Identity = 85/204 (41.67%), Postives = 121/204 (59.31%), Query Frame = 0
Query:    2 LIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQILPDIGQ--------PPVL--TARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLG 195
            L+VDDHP++ + L + +  + PG+R   A + AEA    G  Q   LVLLDL LPDG G+D+LRR  AA     V ++S   +   V  AL AGA GY+PKT P +++  AL +++AGG+Y+P   L    +        P  L  T RQ EVL L+ +G +N+ I  ALG+A+ T K H  A+ +AL V SR++A++A  RLG
Sbjct:    4 LVVDDHPLVREALASLLLELRPGSRVQQAASGAEAITALGCGQAVDLVLLDLRLPDGSGLDLLRRIGAASIGTAVVMLSGDLDRQTVQEALAAGAVGYVPKTEPREIIAGALGLVLAGGVYVPPVALQTAARTFDTRAATPEALGLTGRQLEVLALLMQGKNNKLICRALGLAEPTVKNHVSAILRALGVDSRTEAVLAVTRLG 207          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: UPI0011266B4A (response regulator transcription factor n=1 Tax=Pseudorivibacter rhizosphaerae TaxID=2570323 RepID=UPI0011266B4A)

HSP 1 Score: 139 bits (349), Expect = 1.090e-37
Identity = 86/213 (40.38%), Postives = 128/213 (60.09%), Query Frame = 0
Query:    1 VLIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVD---ALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQ------------ILPDIGQPPVLTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGIDL 198
            VL++DDH +    L   +   LPG     A ++AEA +    LQ D    L LLDLGLPD +G+D L R   A P + V V+SA E    + AA++AGAAG+IPKT+   ++  AL+V++ GG+Y+P++            +LP    P  L+ RQ +VL L+ +G SN+ I   L ++++T K H  A+F+ L+V SR+QA++AAARLG+ L
Sbjct:    3 VLLIDDHALFRDALALLITQKLPGLSLLQAGSMAEALQA---LQADPDVTLALLDLGLPDSQGLDSLARMHDAAPLVTVVVLSADERRETIIAAIEAGAAGFIPKTAQGSVLDNALRVVLDGGVYVPREALDAPGGQRFAGLLPAATTPLDLSPRQLDVLRLLIEGKSNKLICRELDLSESTVKTHLGAIFRRLDVNSRTQAVLAAARLGLRL 212          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A3B7L809_9GAMM (DNA-binding response regulator n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A3B7L809_9GAMM)

HSP 1 Score: 138 bits (348), Expect = 1.920e-37
Identity = 84/212 (39.62%), Postives = 126/212 (59.43%), Query Frame = 0
Query:    2 LIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDA-LVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQIL----PDIGQPPV------------LTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGI 196
            ++ DDHP+    +G  + A LPGAR   A +LA A ++A R +    L+LLDL LPD +G+D L R R   P + VA++SA ++   V AA++ GA GYIPK++P D ++AAL+ ++ G +Y+P Q++    P    P V            LT +Q EVL L+++GASN+ IA  L +A+ T K H  A+ + L V SR QA++ A  L +
Sbjct:    5 MVADDHPLFRDAIGAVIAAGLPGARLLEADSLARALQLAERHEEALDLLLLDLNLPDAEGLDGLCRLREVLPALPVAILSAEQDRRTVLAAIEMGAVGYIPKSTPRDDLLAALRQLLEGQLYLPPQVMRRPPPAHPAPAVTGAAAPDPRLTGLTDKQLEVLELLSRGASNKGIARELNVAETTVKTHVSAILRKLGVASRVQAVLLAGELDL 216          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A1W6LHA2_9BURK (Uncharacterized protein n=1 Tax=Rhizobacter gummiphilus TaxID=946333 RepID=A0A1W6LHA2_9BURK)

HSP 1 Score: 136 bits (343), Expect = 1.020e-36
Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 0
Query:    2 LIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDA---LVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQIL--------------------PDIGQPPVLTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGI 196
            L+VDDH +  + L   +    P  + H A  +AEA    G L+ D    LVLLDLGLPD  G+  L+R R   P + V V+SA E    V +A+ AGAAG++PKT+   ++ AAL+V++AGG+Y+P  +L                    P+   P  L+ RQ +VL L+  G  N+ I   L +A++T K H  A+F+ L VTSR+QA+VAAARLG+
Sbjct:    4 LLVDDHTLFREGLAMLISHGFPDVQLHQAGDIAEAL---GLLRSDGGFELVLLDLGLPDSAGVQGLQRLREQAPDVTVVVLSADETPETVLSAIDAGAAGFVPKTAKAGVMQAALRVVLAGGVYLPPSVLGHARGEPAPVAKVEAPVADDPEATGPGGLSPRQADVLRLLVAGKPNKLICRELDLAESTVKTHLAAIFRKLEVTSRTQAVVAAARLGL 218          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: A0A0Q6XIM3_9BURK (Uncharacterized protein n=1 Tax=Rhizobacter sp. Root1221 TaxID=1736433 RepID=A0A0Q6XIM3_9BURK)

HSP 1 Score: 135 bits (341), Expect = 1.600e-36
Identity = 86/210 (40.95%), Postives = 122/210 (58.10%), Query Frame = 0
Query:    2 LIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQIL-----------PDIGQ--PPVLTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGIDL 198
            L+VDDH +  + L   +    P      A  LAEA           LVLLDL LPD  G+  LRR R   P++ V V+SA E+   V AA+ AGAAG++PKT+   ++ AAL+V++AGG+Y+P  +L           P+ G   P  L+ RQ +VL L+  G  N+ I   L ++++T K H  A+F+ L+VTSR+QA+VAAARLG+ L
Sbjct:    4 LLVDDHTLFREGLAMLISHGFPQVELLQAGDLAEALAAIASAGDVGLVLLDLALPDSTGLHGLRRLREQAPEITVVVLSADESPETVLAAIDAGAAGFVPKTARSGVMQAALRVVLAGGVYLPPTVLGHARPAAEPVTPEPGDTDPTGLSPRQADVLRLLVAGKPNKLICRELDLSESTVKTHLAAIFRKLDVTSRTQAVVAAARLGLRL 213          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: B1XWH3_LEPCP (Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) TaxID=395495 RepID=B1XWH3_LEPCP)

HSP 1 Score: 135 bits (341), Expect = 1.780e-36
Identity = 84/212 (39.62%), Postives = 121/212 (57.08%), Query Frame = 0
Query:    2 LIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQILPDIGQPPV-----------------LTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGI 196
            L+VDDH +  + L   +    P         L +A  V G      L+LLDLGLPD +G+D L+R R+  P++ + V+SA E    + AA+  GAAG+IPKT+    + +AL+V++ GGI++PQ I   I  P                   LT RQ +VL L+A G SN+ I+ AL +A++T K H   VF+ L+VTSRSQ +VAAAR+G+
Sbjct:    4 LLVDDHSLFREGLTMLMAQRFPAVELFDVGDLNDAEAVLGTEPGIELILLDLGLPDSQGLDSLQRLRSVVPEVPIVVMSADERPETILAAIDQGAAGFIPKTARIGAIESALRVVLDGGIFLPQGIYRSIAPPLADGPEVDEAQAALMQSLGLTPRQLDVLRLMALGQSNKQISRALSVAESTIKTHVAVVFRRLDVTSRSQVMVAAARMGL 215          
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Match: UPI001E31CEB6 (response regulator transcription factor n=2 Tax=Pseudorhodoferax aquiterrae TaxID=747304 RepID=UPI001E31CEB6)

HSP 1 Score: 134 bits (338), Expect = 6.060e-36
Identity = 84/208 (40.38%), Postives = 117/208 (56.25%), Query Frame = 0
Query:    2 LIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVLLDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYIPKTSPPDLVVAALKVIVAGGIYIPQQILPDIG--QPPV------------LTARQFEVLLLIAKGASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLG 195
            L+VDDHP++ + L + + ++  GA    A T AEA           LVLLDL LPDG G+D+LRR         V V+S   +   V  AL AGA GYIPKT P +++  AL +++AGG+Y+P   L      +PP             LT RQ EVL L+ +G +N+ I  ALG+A+ T K H  A+ +AL V SR++A++A  RLG
Sbjct:    9 LVVDDHPLVREALASLLLSLRQGATVQQAATGAEALAALDAAGSIDLVLLDLRLPDGSGLDLLRRIGTDHIGTAVVVLSGDLDRKTVQEALAAGAVGYIPKTEPHEIIAGALGLVLAGGVYVPPMALQPAAAARPPSMAGAGASPSDLGLTGRQLEVLALLMQGRNNKLICRALGLAEPTVKNHVSAILRALGVDSRTEAVLAVTRLG 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig720.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YL48_9PROT1.510e-5452.40Response regulator transcription factor n=1 Tax=Be... [more]
A0A521Z1D5_9PROT2.290e-4546.73Response regulator transcription factor n=1 Tax=Be... [more]
A0A1F6UZF9_9PROT2.960e-4043.46Uncharacterized protein n=1 Tax=Candidatus Muprote... [more]
A0A5C8BZ32_9BURK1.230e-3841.67Response regulator transcription factor n=1 Tax=Al... [more]
UPI0011266B4A1.090e-3740.38response regulator transcription factor n=1 Tax=Ps... [more]
A0A3B7L809_9GAMM1.920e-3739.62DNA-binding response regulator n=2 Tax=unclassifie... [more]
A0A1W6LHA2_9BURK1.020e-3639.91Uncharacterized protein n=1 Tax=Rhizobacter gummip... [more]
A0A0Q6XIM3_9BURK1.600e-3640.95Uncharacterized protein n=1 Tax=Rhizobacter sp. Ro... [more]
B1XWH3_LEPCP1.780e-3639.62Two component transcriptional regulator, LuxR fami... [more]
UPI001E31CEB66.060e-3640.38response regulator transcription factor n=2 Tax=Ps... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000792Transcription regulator LuxR, C-terminalPRINTSPR00038HTHLUXRcoord: 167..179
score: 26.36
coord: 137..151
score: 41.57
coord: 151..167
score: 38.97
IPR000792Transcription regulator LuxR, C-terminalSMARTSM00421luxrmega5coord: 134..191
e-value: 1.6E-17
score: 74.2
IPR000792Transcription regulator LuxR, C-terminalPFAMPF00196GerEcoord: 136..191
e-value: 1.8E-14
score: 53.0
IPR000792Transcription regulator LuxR, C-terminalPROSITEPS50043HTH_LUXR_2coord: 130..195
score: 22.263708
IPR000792Transcription regulator LuxR, C-terminalCDDcd06170LuxR_C_likecoord: 137..193
e-value: 1.79159E-14
score: 62.9372
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 1..113
e-value: 1.7E-11
score: 54.2
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 1..113
e-value: 6.2E-18
score: 65.0
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1..117
score: 25.575964
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..196
e-value: 6.2E-44
score: 151.8
NoneNo IPR availablePIRSRPIRSR002937-1PIRSR002937-1coord: 30..111
e-value: 0.0019
score: 15.1
NoneNo IPR availablePANTHERPTHR45566HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATEDcoord: 1..196
NoneNo IPR availableCDDcd17535REC_NarL-likecoord: 1..118
e-value: 2.82767E-17
score: 72.1596
IPR016032Signal transduction response regulator, C-terminal effectorSUPERFAMILY46894C-terminal effector domain of the bipartite response regulatorscoord: 129..196
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 1..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig720contigP-wetherbeei_contig720:1212..1811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig720.2.1mRNA_P-wetherbeei_contig720.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig720 1212..1811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig720.2.1 ID=prot_P-wetherbeei_contig720.2.1|Name=mRNA_P-wetherbeei_contig720.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp
VLIVDDHPIIHQTLGTAVGAVLPGARQHVAQTLAEAFEVAGRLQVDALVL
LDLGLPDGKGIDVLRRFRAAFPKMRVAVVSATENSVLVAAALKAGAAGYI
PKTSPPDLVVAALKVIVAGGIYIPQQILPDIGQPPVLTARQFEVLLLIAK
GASNRDIAAALGIADNTAKQHTHAVFQALNVTSRSQAIVAAARLGIDLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000792Tscrpt_reg_LuxR_C
IPR001789Sig_transdc_resp-reg_receiver
IPR016032Sig_transdc_resp-reg_C-effctor
IPR011006CheY-like_superfamily