prot_P-wetherbeei_contig719.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig719.1.2
Unique Nameprot_P-wetherbeei_contig719.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length567
Homology
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BLAST of mRNA_P-wetherbeei_contig719.1.2 vs. uniprot
Match: UPI00193A6B84 (LOW QUALITY PROTEIN: death-inducer obliterator 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A6B84)

HSP 1 Score: 63.2 bits (152), Expect = 1.230e-6
Identity = 29/89 (32.58%), Postives = 43/89 (48.31%), Query Frame = 0 
Query:  142 YCLCGAPNNGAGMVSCDVCEGWFHNACVNVDTAVLKEIEFRGEQRAARKAAGDADDASDEPDFMCPRCCRDAGVEYRYGHVDVDRPLEH 230
            +C+C  P+NG  M+SCDVCE WFH  CV V     K++E +GE+                  ++CP C +  G + ++ H      L H
Sbjct:  218 WCICKKPHNGRFMISCDVCEEWFHGDCVGVTVQRGKQMEKKGEE------------------YVCPSCLKSKGKQPKHKHNSDKESLRH 288
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig719.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00193A6B841.230e-632.58LOW QUALITY PROTEIN: death-inducer obliterator 1-l... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 142..210
e-value: 7.9E-7
score: 38.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 138..212
e-value: 4.1E-13
score: 50.8
NoneNo IPR availablePIRSRPIRSR628651-50PIRSR628651-50coord: 133..173
e-value: 0.0015
score: 16.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..375
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 143..209
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 137..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig719contigP-wetherbeei_contig719:621..2914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig719.1.2mRNA_P-wetherbeei_contig719.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig719 239..3478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig719.1.2 ID=prot_P-wetherbeei_contig719.1.2|Name=mRNA_P-wetherbeei_contig719.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=567bp
MFLSFLLLSFFLSFFLFSFRSRLILECLQTLLWCALMRWALHDRPSGLKP
PLATLQFLLQYARHLKVRDGAITAFLEQVVLRAQAWQAEARAALAPKPNY
AAGEAVSEAAIRRLHAKLRGIPVRIPEERALQAVMAEGCERYCLCGAPNN
GAGMVSCDVCEGWFHNACVNVDTAVLKEIEFRGEQRAARKAAGDADDASD
EPDFMCPRCCRDAGVEYRYGHVDVDRPLEHSRTLWAEDPAESDAPTERDV
DEYWPPMIFKYVAAIDIAETPTHGGGGGGGGAGGGERGGGGVGIGSASSG
GGDGSGSGSDGGGGGSGAGSDRGGSKNGGGSSGGAPVANRTMLLPPLQHA
IQHGAGAAGPPSQRSMQFSGVNTASMMAAANGGRHDGGGRHDGGGSGRGG
GGNVGGADAHFAAGYHYPQAGIGGLHGQPMNPWHMSRDALPGPHVLGSGG
GGHHASLAAAAYGHAAAAAAAQSHAYAHSYGLPSPGSAAPYGTPPQHMIA
QPGPPLIYPRHGPSGLPSGGGGGSRGGGGRGGRGGGASRGKRVRDGAGGG
GGGGGKRRQSGPPGSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD