mRNA_P-wetherbeei_contig717.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE) HSP 1 Score: 219 bits (559), Expect = 5.380e-58 Identity = 157/468 (33.55%), Postives = 213/468 (45.51%), Query Frame = 3
Query: 84 MARPVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYE---ELPGSIGTTSFFN--AGPSRIPFWLSESG----ESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAG-------------------PPVVASLQEENGRNAAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIV 1403
MA+ VSI DGEV RN+ LV G +H+L++ HD ++GARAA+LDYE E+PGS GTT+ FN AG IPF + + ++G L + R GL GF Y CE+ G+ +L+TT+ V N E E+EV+VP D S GV WYE+ R+ D+ T VHRRFRDF L EQV + LMKGHHLR+SLPR P K KL +HGD F +ERR+ L+ +L+ LL LPHV LD+TRAFLG++GN RE+SV ++ ++LG L+ + +AG PPV+ S+ G +P V GDR+ K+ G E M A + +A RP+++HFL I+
Sbjct: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAKEEVPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYEVSVPATV-------DTGSRV------------RGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQV--------------------------------------------------------------------------------------------------------ESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVL---GNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPIL 342
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA) HSP 1 Score: 201 bits (511), Expect = 3.590e-52 Identity = 151/460 (32.83%), Postives = 203/460 (44.13%), Query Frame = 3
Query: 63 LTSSAAEMARPVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNA--GPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAGPPVVASLQEENGRN------------AAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEI 1400
L S+ MA S+F GE+ R++E + G RHVLS++HD VSGARA LLDY EL S GT++ N G ++I F + +GE G LE+ R G+ G++YRCE+ GR I ETT+KV N E EF+V +P +S A QP V WY L VRR RD + T VHRR+ DF LH+Q DG+MKGHHL SLP LP K ++D D F + RR +LQ +LR LL +PHVG LDTTRAFLG++G+ RE S V G AG + A +Q + + AP+ V+VGD + ++GGA +EG V + +P+P LVH ++ +
Sbjct: 81 LDSAVRSMA---SVFSGEINRHWEFLDSAGGRHVLSLIHDCVSGARACLLDYAELKDSAGTSNCLNLLFGAAKIAFEVKATGEWGKLEIRRSGILGYQYRCEVDGRAIRETTSKVNNQEHEFDVRIP------------SSVQACAYKGGDQPN---VTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQC--------------------------------------------------------------------------------------------------------DGMMKGHHLSDSLPPLPCK--SPLLDRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRERSFVVSGGAAG------GGGAGFALTADVQGDGLSDPHGFLTVAQLLRGAPAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI) HSP 1 Score: 153 bits (387), Expect = 2.220e-37 Identity = 116/386 (30.05%), Postives = 161/386 (41.71%), Query Frame = 3
Query: 303 ESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAG-------------------PPVVASLQEENGRNAAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIV 1403
++G L + R GL GF Y CE+ G+ +L+TT+ V N + E+EV+VP A V + S GV WYE+ R+ D+ T VHRRFRDF L EQV + LMKGHHLR+SLPR P K KL +HGD F +ERR+ L+ +L+ LL LPHV LD+TRAFLG++GN RE+SV ++ ++LG L+ + +AG PPV+ S+ G +P V GDR+ K+ G E M A + +A RP+++HFL I+
Sbjct: 10 DNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVP----ATVDTGSRVS---------------GVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQV--------------------------------------------------------------------------------------------------------ESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVL---GNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPIL 269
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA) HSP 1 Score: 159 bits (402), Expect = 7.080e-37 Identity = 122/441 (27.66%), Postives = 184/441 (41.72%), Query Frame = 3
Query: 96 VSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVREWGGVLDVPCLSQESRKKSDPILGDLVRGDSWTAVWSGETTSVRRHAKARRCPKLCFKAKKTGGLVQGKIEKRCTIITLHPAHREMDLSAGKSNRVGRKINQVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVLQPSPRLAGPPVVASLQEENGRNAAPSEVSVGDRVSKIGGAPV------EGMPFAAVINLMASLPRPLLVHFLTEI 1400
++ GEV R++ +S G +HV+ + HDTV+G R+ + EE+PGS+G++ FF+ I F + + G + + + GLF FRY C + GR + T +A+ D+++ + A A A + V WYEL+V R D + T VHRR+R+F L EQV H A KGHHLR+SLP LP + LKL++DH D F +ERR L+ L LL +PHVG + + FLG +E+SV+F ++ LGL + + + +V + +E G S V VGD +SK+GG PV +G+ F L RP+++HFL +
Sbjct: 4 TNVLQGEVHRSWVWLSPAGAKHVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSTEAHHINFTVGQDQCRGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADE-----------------DEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQV--------------------------------------------------------------------------------HAA------------------------FKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITRTV-VPEESIVVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGL-----RPIVIHFLEAV 317
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S2DHE0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHE0_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.200e-25 Identity = 79/201 (39.30%), Postives = 101/201 (50.25%), Query Frame = 3
Query: 96 VSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESG---ESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGE--------------------GVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVR 629
VS+ GEV R++ Q GR H +S+ H TV+GARAA+LDYEELPGS+GT+S F+ IPF +S + G L + RHG+FGFRY C + GR + E T V +VT + D G PA+ G VAWY L V RR D + T VHRRFRDF L Q++
Sbjct: 12 VSVLSGEVNRSWLFPDQDGRVHEVSLYHHTVTGARAAMLDYEELPGSLGTSSMFHTTHG-IPFSVSSTSGVITEGSLNIHRHGVFGFRYSCLVAGRVVPECTLMVDRKTAGNDVTPQQH--------DVTQHGGLLPSPAIMDAGVVVSIDDXXXXXXXXXXXXELSVAWYSLRVVRRSDQATTTVHRRFRDFVELASQLQ 203
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A6U1MRC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRC3_9STRA) HSP 1 Score: 109 bits (273), Expect = 8.010e-23 Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 3
Query: 933 QVDGLMKGHHLRASLPRLPNKHLKLVIDHGDRRFADERREQLQDFLRILLPLPHVGDLDTTRAFLGILGNTREYSVVFKRQKLGLVL-------QPSPRLAGPPV-------VASLQEENGRNAAPSEVSVGDRVSKIGGAPVEGMPFAAVINLMASLPRPLLVHFLTEIVP 1406
++ +KG+HL +SLP LP KH+KL++DH D F ++RR +L+D+LR LL +P V + +FLGI RE+S+V + Q LGL + PS P V +Q + R V GD +SK+ G PV + F ++ ++SLPRP ++HFL ++ P
Sbjct: 44 EMQAALKGNHLCSSLPPLPEKHVKLLLDHEDPEFVEQRRSELEDYLRRLLNMPFVTGMYQVHSFLGIARQLREFSIVVESQSLGLTVAEVRNDWSPSGATVAPSTNRERSFRVTEIQSPDLRQV----VREGDILSKVNGHPVGPLSFPELMRQLSSLPRPFVMHFLQKLAP 211
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S3NJE9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJE9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.630e-18 Identity = 63/186 (33.87%), Postives = 103/186 (55.38%), Query Frame = 3
Query: 93 PVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGE------GVAWYELSV-RRRRDNSVTNVHRRFRDFATLHEQVR 629
PVSIF GEVCR+++ + G +H +S+ H ++GARAA++D+EEL GS+GT+S F+A + +PF + G + ++R L GF Y C + G + E T + ++ T RF + +D+ +A+ + V + + +AWY ++ R +T VHRRFRDF L E ++
Sbjct: 2 PVSIFAGEVCRSWKFEDREGIKHEVSLWHHPLTGARAAMVDHEELEGSLGTSSVFHAARTSMPFQAGSA--HGIISINRASL-GFEYACSVDGILVPEATTAQSREKIPGYAT--RF---NPSEDEIQTASYTSRVESYATSRDHAQPTLAIAWYCVATFETRSGRELTRVHRRFRDFVELDESIQ 179
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: F0YDA6_AURAN (PX domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA6_AURAN) HSP 1 Score: 100 bits (249), Expect = 6.150e-18 Identity = 67/189 (35.45%), Postives = 90/189 (47.62%), Query Frame = 3
Query: 96 VSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELE----------FEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSV--TNVHRRFRDFATLHEQV 626
VSIF GEV R + G+ H +S+ H ++GARAAL+D+EEL GS+GT+S F+ + IPF G G + + R FGF Y C G + E T+ A+P V R AHV D AS + + WY + + + V T VHRRFRDFA L E +
Sbjct: 2 VSIFSGEVNRTWRFCDGGGQHHEVSLYHHPLTGARAALVDHEELEGSLGTSSVFHGSTTTIPFACG--GCRGAIHIQRSAFFGFSYACSADGVSVPEATSATADPRRAPGHAGRSGPALRVNSCR-VLAHVTTRDHASPSAP------------IVWYLIETHASKGDEVATTRVHRRFRDFADLDEAI 175
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.540e-17 Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 3
Query: 78 AEMARPVSIFDGEVCRNFELVSQHG-RRHVLSIVHDTVSGARAALLDYEELPGSIGTTSFFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANPELEFEVTVPRFTYAHVCDDDKASAAGAAAVPAVQPGGEGVAWYELSVRRRRDNSVTNVHRRFRDFATLHEQVRE 632
A + VS+F+G++ R + +HG ++HVL++ HDT+SG R+A+LDY+E+ GS+G +S F+ E+ G++E+ R G F Y C + R+I E T V PE + V P DD++ +AWY + R D + + VHRRFR+FA L+ Q+++
Sbjct: 10 ANLLPMVSVFEGQLTRTW--FYEHGEKKHVLNLYHDTISGVRSAMLDYQEIRGSLGNSSLLMDSKGHRIFFTIEN-LPGYIEIKRSGWTSFVYSCCINDRDIKEATQGV--PENQDVVFKPTILDTVFTVDDQSEFQ--------------IAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQ 176
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Match: A0A7S2UVB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB3_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 8.730e-13 Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 3
Query: 96 VSIFDGEVCRNFELVSQHG--RRHVLSIVHDTVSGARAALLDYEELPGSIGTTS-FFNAGPSRIPFWLSESGESGFLEVSRHGLFGFRYRCELQGREILETTAKVANP 410
VS++ GE+ R + V G + HV+++ HDT++G R A++DYEE+ GS+GT+S ++ IPF ++ G + +++ GL GFRY C + ++ET + P
Sbjct: 2 VSLWSGELNRTWRFVDPEGGDKEHVVTLYHDTITGVRCAMMDYEEIQGSMGTSSVLMSSSGVNIPF-IAGGRHIGRIHIAKDGLLGFRYECWVGNTRLVETLQQSQMP 108 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig717.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig717.2.1 >prot_P-wetherbeei_contig717.2.1 ID=prot_P-wetherbeei_contig717.2.1|Name=mRNA_P-wetherbeei_contig717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=708bp MARPVSIFDGEVCRNFELVSQHGRRHVLSIVHDTVSGARAALLDYEELPGback to top mRNA from alignment at P-wetherbeei_contig717:2979..6260- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig717.2.1 ID=mRNA_P-wetherbeei_contig717.2.1|Name=mRNA_P-wetherbeei_contig717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3282bp|location=Sequence derived from alignment at P-wetherbeei_contig717:2979..6260- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig717:2979..6260- >mRNA_P-wetherbeei_contig717.2.1 ID=mRNA_P-wetherbeei_contig717.2.1|Name=mRNA_P-wetherbeei_contig717.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2124bp|location=Sequence derived from alignment at P-wetherbeei_contig717:2979..6260- (Phaeothamnion wetherbeei SAG_119_79)back to top |