mRNA_P-wetherbeei_contig7146.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A836CGN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN8_9STRA) HSP 1 Score: 161 bits (408), Expect = 4.660e-40 Identity = 91/197 (46.19%), Postives = 120/197 (60.91%), Query Frame = 1
Query: 244 TPIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIRSVDGRYERTPFFDALIERGLQAGTRFSIDHVSRAECEELGIRRHSVTGKYYLQYF-------------------GSQTAESSKKKARGETQKVLMKTLDDLMGAEIQATAGRGKITVTKAVSTNAKRRKVTQIIIEIDSG 777
TPIK+YN+ERSAYRW +ARHP +FE G+ T LERAP AR+AF+ GW GA+ LIR V+GRYERT FFD +I RGLQ TRF+ H++ AE + L IR+ K+YL +F + + ++ R + Q+ L +T+ + E+ A A ITVTKAV T A R +TQI+IEIDSG
Sbjct: 3 TPIKKYNYERSAYRWLLARHPKQFEARGVTTTVLERAPAARKAFWTCGWPGAQLLIRCVEGRYERTVFFDTIIARGLQLSTRFAYPHLTPAESDALQIRQSGA--KHYLSHFLAAPDADRYEHDPCCALEAAAAAGGAGAQQLRSDAQRALWRTISGHISPELAAAAPHRSITVTKAVKTFAART-ITQIVIEIDSG 196
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A835Z9J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J0_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.790e-36 Identity = 83/196 (42.35%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 241 ATPIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIRSVDGRYERTPFFDALIERGLQAGTRFSIDHVSRAECEELGIRRHSVTGKYYLQYFGSQ--------------------TAESSKKKARGETQKVLMKTLDDLMGAEIQATAGRGKITVTKAVSTNAKRRKVTQIIIEI 768
+TPIKRYN+ERSAYRW + RHP +FE+ G+ + LERAP+AR+A F + W G+++L+R V+GRYERT FFD I+RGL GTRF+I+H++ E + LGI TGK YL ++G A + A E + L T+ L+G E++ + ++TVTKAV R +TQ++IEI
Sbjct: 6 STPIKRYNYERSAYRWLLQRHPRQFEKEGLTSTALERAPVARKALFHTSWSGSKKLVRCVEGRYERTVFFDTFIKRGLGFGTRFAIEHLTPQERQILGICE-DPTGKVYLAHYGIAPQVEPELNGADGGGVCVPGCAAPRRRCAAHSEMSRKLWHTIAGLVGPELEGQPSQRQVTVTKAVKAMGAR-VITQVVIEI 199
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A6H5L3C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C0_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.500e-31 Identity = 69/115 (60.00%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 247 PIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIRS-VDGRYERTPFFDALIERGLQAG-TRFSIDHVSRAECEELGIRRHSVTGKYYLQYFGS 585
PIK+YN+ERS YRW ++RHP FE +GI T+TLERAPLAR+AF+ SGW GA+ L+++ D ++ERT FFD +IERGL G TRFS++HV E +LGI S TGKYYLQ +GS
Sbjct: 7 PIKKYNYERSLYRWLVSRHPEPFEEHGITTKTLERAPLAREAFYRSGWLGAKVLVQNHEDNKFERTNFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAYGS 121
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A836C9L8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L8_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.410e-26 Identity = 67/121 (55.37%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 244 TPIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIRS-VDGRYERTPFFDALIERGLQAGTRFSIDHVSRAECEELGIRRHSVTGKYYLQYFGSQTAESS 603
+PI++YN+ERS YRW MARH F R GI T+TLE A ARQAF +SGWEGAR LIR+ GR+ERTP F+ +I+RGL GTRF ID +S E LGI S KY L F + ES+
Sbjct: 336 SPIQKYNYERSTYRWLMARHADIFARCGITTKTLESASRARQAFHQSGWEGARMLIRADSQGRHERTPLFETIIKRGLSKGTRFDIDTISAREQATLGITFDSTLEKYVLSQFTNGFDEST 456
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A6H5JN30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN30_9PHAE) HSP 1 Score: 118 bits (295), Expect = 2.420e-23 Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 244 TPIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIRSVDGRYERTPFFDALIERGLQAGTRFSIDHVSRAECEELGIRRHSVTG-KYYLQYFGSQTAE 597
TP+ ++NFERS YRW + RHPA+FER + L+ A AR+AF+E GW A+ LIR DG++ERTPFFDA+I RGL+ TRF ++ E E LG+ R G K +++F S E
Sbjct: 10 TPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLRNSTRFDAATLTEDEIEALGMHRDETLGFKLQIRHFRSSRKE 128
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A835YVN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN4_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.140e-20 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 244 TPIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIR-SVDGRYERTPFFDALIERGL--QAGTRFSIDHVSRAECEELGIRRHSVTGKYYL 570
+P ++YN+ERS YRW MAR+ FE GI T+TLE A AR+AF+ SGW GAR LI+ GR+ERTPFF+A+I+RG+ Q+G RF ++ E LGI R+ +T + L
Sbjct: 4 SPTQKYNYERSMYRWLMARNSEAFETCGITTKTLESAKRAREAFYGSGWPGARYLIQVDSSGRHERTPFFEAIIQRGIRHQSGCRFDGAALTAGELTSLGIVRNPITKDFVL 115
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A835ZER7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.610e-12 Identity = 58/139 (41.73%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 397 ARRLIRSVDGRYERTPFFDALIERGLQAGTRFSIDHVSRAECEELGIRRHSVTGKYYLQYFGSQTAESSKKK-----------ARGETQKVLMKTLDDLMGAEIQATAGRGKITVTKAVST-NAKRRKVTQIIIEIDSG 777
ARR R V+GRYERT FFD +I RGLQ TRF+ H++ AE E L I + KYYL YF E A + Q+ L +T+ + EIQ + + ITVTKAV R +TQI+IEID+G
Sbjct: 125 ARR--RCVEGRYERTIFFDNIINRGLQLSTRFAYPHLTTAESETLQICQSG--SKYYLAYFVEIDGECPGDDLGGAAGGFGGGAHSDMQRQLWRTISSHIVPEIQGASAQRSITVTKAVKRLGGGARTITQIVIEIDNG 259
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Match: A0A835YN03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN03_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.070e-10 Identity = 66/221 (29.86%), Postives = 96/221 (43.44%), Query Frame = 1
Query: 241 ATPIKRYNFERSAYRWFMARHPAEFERYGIQTRTLERAPLARQAFFESGWEGARRLIRSVDGRYERTPFFDALIERGLQAGTRFSIDHVSRAECEELGIRRHSVTGKYYLQYFGSQT------------------AESSKKKARGET--QKVLMKTLDDLMGAEIQATAGRGK-ITVTKAVSTNAKRRKVTQIIIEIDSGSDSEGEQSSTAAGESAAAGVD 840
++PIKRYN+ERSAYR V+GRYERT FF++LI RGLQ TR S +H+ E LGI + TG YL ++G ++K+ R T Q+ L + +GA++ G + ITVTK+ +T+A R VT+++IEI + S +AA + G+D
Sbjct: 4 SSPIKRYNYERSAYR-------------------------------------------CVEGRYERTAFFESLIARGLQFATRLSAEHLLPEEKAALGIAEDAATGTVYLSHYGLAPPMEHYSRDCAGGDCVPGCCSGARKRCRAHTDAQRSLWHAVSAAVGAQLPTKGGGERDITVTKS-TTDAGCRSVTRVVIEISCDGGDVDDASLSAAAAAXXXGID 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7146.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7146.1.2 >prot_P-wetherbeei_contig7146.1.2 ID=prot_P-wetherbeei_contig7146.1.2|Name=mRNA_P-wetherbeei_contig7146.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=533bp MVKRSSSSGSGGGPAATKRQAVALAVAPPPATPIKRYNFERSAYRWFMARback to top mRNA from alignment at P-wetherbeei_contig7146:221..3113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7146.1.2 ID=mRNA_P-wetherbeei_contig7146.1.2|Name=mRNA_P-wetherbeei_contig7146.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2893bp|location=Sequence derived from alignment at P-wetherbeei_contig7146:221..3113+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7146:221..3113+ >mRNA_P-wetherbeei_contig7146.1.2 ID=mRNA_P-wetherbeei_contig7146.1.2|Name=mRNA_P-wetherbeei_contig7146.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1599bp|location=Sequence derived from alignment at P-wetherbeei_contig7146:221..3113+ (Phaeothamnion wetherbeei SAG_119_79)back to top |