mRNA_P-wetherbeei_contig7143.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig7143.1.1
Unique Name	mRNA_P-wetherbeei_contig7143.1.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A7S3YIG7_HETAK (Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIG7_HETAK)

HSP 1 Score: 397 bits (1021), Expect = 4.030e-136
Identity = 199/286 (69.58%), Postives = 230/286 (80.42%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD 858
            ++YLQEAF+APLV+QLTDDEKFLF   L L+E HRLAY NA+DIIACGFD  KTF+FSDLDYI HMYP+I++IQ+  T+N  RG FGF + DNIG  AFPAVQA PSF A FPVPLKG+  M CLIPCAIDQDAYFRMTRD+AP+LG+ KP+LIHSKFFP L G  GKMSAS A ++IYV+DT  +IKKKV    FSGGQETLELQRE+GANI+VDV YQYLRFFLEDD+RL  IG DY AG++ +GEVK +LIE L  +V  HQ R+A VTDE L  FM VR LD
Sbjct:   72 TQYLQEAFNAPLVVQLTDDEKFLFNDKLTLEETHRLAYANAKDIIACGFDPTKTFIFSDLDYIQHMYPMIVKIQRCVTFNQARGIFGFTDSDNIGRQAFPAVQACPSFPATFPVPLKGSRTMPCLIPCAIDQDAYFRMTRDVAPRLGFKKPSLIHSKFFPPLQGKGGKMSASMASTSIYVSDTAAQIKKKVNKYAFSGGQETLELQRELGANIEVDVPYQYLRFFLEDDERLEQIGRDYKAGKLLSGEVKAILIEVLQELVGTHQARKAAVTDEVLAEFMRVRELD 357

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: D8LNT5_ECTSI (Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT5_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 4.350e-136
Identity = 201/285 (70.53%), Postives = 228/285 (80.00%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGSCFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD 858
            ++YLQEAF  PLV+QLTDDEKFLFK  L L+E HRLA+ENA+DIIACGFD   TF+FSDLDYI HMYPV+L+IQK  TYN VRG FGF E  NIG  AFPAVQAAPSFS++FP+PL G  +  CLIPCAIDQDAYFRMTRD+AP++   KPALIHS+FFPGL GP GKMS+S   SAI+VTDTP K+KKK+  CFSGGQET ELQ   GANI VDV YQYL FF+EDDD L  IG +YAAGRM TGEVKK+LIE LT M  +HQ  RA VTDE +R FM VRP+D
Sbjct:  310 TKYLQEAFKVPLVVQLTDDEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLDYIQHMYPVVLKIQKLVTYNQVRGIFGFTESHNIGCQAFPAVQAAPSFSSSFPIPLGGTPDRPCLIPCAIDQDAYFRMTRDVAPRMKLRKPALIHSRFFPGLQGPGGKMSSSTESSAIFVTDTPKKVKKKINGCFSGGQETKELQELHGANIHVDVPYQYLTFFMEDDDELKRIGEEYAAGRMLTGEVKKILIEILTKMTKDHQDARAAVTDEMVRSFMAVRPID 594

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A4D9CRR7_9STRA (Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRR7_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 6.100e-134
Identity = 201/285 (70.53%), Postives = 228/285 (80.00%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGSCFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD 858
            +RYLQEAFD PLVIQLTDDEKF FK  L L+E HRLAYENA+D+IACGFD+ KTF+FSDLDYI ++YP +L+IQK  T+N  RG FGF E D+ G  AFPAVQAAPSF ++FPVPLKG  +M CLIPCAIDQDAYFRMTRD+AP+LG  KP+LIHSKFFPGL G  GKMSAS   SAIYVTDT  KIK K+   FSGGQET ELQ+E+GA+++VDVAYQYL FF EDDD L  IG +Y AGRM TG+VK  LIE LTAMV EHQ RRA V DE LR FM VR L+
Sbjct:  315 TRYLQEAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQYLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFPSSFPVPLKGCLDMPCLIPCAIDQDAYFRMTRDVAPRLGCKKPSLIHSKFFPGLEGKGGKMSASAEQSAIYVTDTGKKIKTKISRAFSGGQETAELQKELGADLEVDVAYQYLTFFSEDDDELETIGKEYKAGRMMTGQVKGRLIELLTAMVKEHQDRRATVGDEILREFMRVRELE 599

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A835ZE99_9STRA (Tryptophan--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE99_9STRA)

HSP 1 Score: 387 bits (994), Expect = 1.090e-128
Identity = 199/285 (69.82%), Postives = 227/285 (79.65%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGSCFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD 858
            +++LQEAF  PLVIQLTDDEKFLFK+ L L E HRLA ENARDIIAC FD  KTFMFSDLDYI  +YPV+L+IQK  T+N  RG FGF +  NIG  AFPAVQAAPSFS AFP  L G ANM CLIPCAIDQDAYFRMTRD+AP+L Y KPALIHSKFFPGL GP+GKMSASE  +A++VTDT  ++++KV S FSGGQ+T E Q E+GAN+ VDVAYQYL FFLEDDD    IG DYAAGR+ TG+VKK L+E L  +V +HQR RA VTDE L RFM VRPL+
Sbjct:  314 TQWLQEAFGVPLVIQLTDDEKFLFKSNLPLAETHRLARENARDIIACEFDPAKTFMFSDLDYIKELYPVVLQIQKFVTFNQTRGIFGFNDSTNIGCIAFPAVQAAPSFSVAFPKVL-GKANMPCLIPCAIDQDAYFRMTRDVAPRLRYPKPALIHSKFFPGLQGPKGKMSASELGTAVFVTDTQKQVEQKVKSSFSGGQDTKEKQLELGANLSVDVAYQYLGFFLEDDDEYRQIGEDYAAGRLLTGQVKKRLVEVLWEVVGKHQRLRAAVTDEQLERFMSVRPLE 597

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A7S0XFQ6_9STRA (Tryptophan--tRNA ligase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFQ6_9STRA)

HSP 1 Score: 380 bits (977), Expect = 8.380e-128
Identity = 187/283 (66.08%), Postives = 228/283 (80.57%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVR 849
            +++LQ+ FD PLVIQLTDDEKFLFK  L L++ HRLAYENA+DIIACGF++ KTF+F+DLDYI HMYP IL+IQK  TYN  RG FGF   DNIG ++FPAVQA PSFS+AF +PLKG  NM CLIPCAI+QDAYFRMTRD+AP+LG+ KPALIHS FFP L G  GKMSAS A SA+YVTDTP +IK K+    FSGG+ETLELQR+ GA++ VDV+Y++L+FFL+DD+RL  IG DY++G M TGEVKK LI  LT  V  HQ +RA+VTDE L +++ +R
Sbjct:  190 TKWLQDVFDCPLVIQLTDDEKFLFKQELVLEDCHRLAYENAKDIIACGFNLEKTFIFTDLDYIQHMYPTILKIQKCTTYNQARGIFGFTMSDNIGKSSFPAVQATPSFSSAFKIPLKGINNMPCLIPCAIEQDAYFRMTRDVAPRLGFVKPALIHSVFFPPLQGRGGKMSASSANSAVYVTDTPKQIKDKINKHAFSGGRETLELQRQYGADLSVDVSYEWLKFFLDDDERLDQIGRDYSSGAMLTGEVKKELITLLTDFVKIHQEKRAQVTDEVLHKYLAIR 472

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A7S1UFR9_9STRA (Tryptophan--tRNA ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFR9_9STRA)

HSP 1 Score: 367 bits (943), Expect = 7.970e-124
Identity = 181/251 (72.11%), Postives = 203/251 (80.88%), Query Frame = 1

Query:    1 ISRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVK 750
            ++++LQEAFD PLVIQLTDDEKFLFK  L L+  H LAY NA+DI+ACGFD  KTFMFSDLDYIGHMYPVI+ IQK  T++  RG FGF +  NIG  AFPAVQAAPSF AAFPVPL+G+ +M CLIPCAIDQDAYFRMTRD+APKLGY KPALIHSKFFP L GP GKMSAS   S+IY+TDT  KIKKK+    FSGGQETLELQRE+GANIDVDV+  YL FFLEDD+ L  I   YA+G M TGEVK
Sbjct:  136 LTKWLQEAFDVPLVIQLTDDEKFLFKQDLTLERCHELAYANAKDIVACGFDESKTFMFSDLDYIGHMYPVIVNIQKRVTFSTARGIFGFSDSHNIGCQAFPAVQAAPSFPAAFPVPLRGSTDMPCLIPCAIDQDAYFRMTRDVAPKLGYRKPALIHSKFFPSLLGPGGKMSASNDNSSIYLTDTANKIKKKINKHAFSGGQETLELQRELGANIDVDVSITYLTFFLEDDEELEEIKRKYASGEMLTGEVK 386

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: F0VBM7_NEOCL (Tryptophan--tRNA ligase n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VBM7_NEOCL)

HSP 1 Score: 357 bits (916), Expect = 7.900e-117
Identity = 183/281 (65.12%), Postives = 213/281 (75.80%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFME 843
            ++YLQ+ FD PLVIQLTDDEKFLFK  L L+E HRLA+ENA+DIIACGFD  KTF+FSDL YI H+YPVIL IQK  TYN VRG FGF E DNIG +AFPAVQAAPSF  AFP+   G  ++ CLIP AIDQD YFRMTRD+AP+LG  KPALIHS+F P L G + KMS S   S+IYV+DTP +IK K+    FSGGQ T   QRE GAN+++DV YQYL F L DDD L  IG  YA G M TGEVK VLI+EL A+V  HQ RRA+VTD+ +R+FM+
Sbjct:  316 TKYLQDVFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNIGKSAFPAVQAAPSFPTAFPMIFGGKKDVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQGFKTKMSGSVETSSIYVSDTPEQIKNKINKYAFSGGQATESEQREKGANLEIDVPYQYLTFILPDDDLLKEIGEKYAKGEMLTGEVKAVLIKELQALVGGHQERRAKVTDDMVRQFMD 596

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A7S3PML0_9STRA (Tryptophan--tRNA ligase n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PML0_9STRA)

HSP 1 Score: 350 bits (897), Expect = 8.840e-117
Identity = 171/285 (60.00%), Postives = 219/285 (76.84%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPL 855
            +++LQE FDAPLVIQ+TDDEKFL+K  L L+EAHRL YENA+DIIACGFD+ KTF+FS+LDY+GH+YPV+ +IQK  T N  +G FGF   D IG  +FPA+QAAPSFS AFP+ L G  N  CLIPCAIDQD YFRMTRD+AP+LG+ KPALIHSKFFP L G   KMSAS   + IY+TDTP +I+ K+    FSGG ETLE  R+ GAN+++D+ Y +L+FFL+DD++LA +  +Y AGRM TGEVK+ L + LT ++  HQ  ++ VTDE +  +M++RPL
Sbjct:  107 TQWLQEVFDAPLVIQMTDDEKFLWKD-LTLEEAHRLGYENAKDIIACGFDVKKTFLFSNLDYMGHLYPVVCKIQKKITLNQAKGCFGFDGSDAIGKISFPAIQAAPSFSDAFPIVLGGLDNAFCLIPCAIDQDPYFRMTRDIAPRLGWQKPALIHSKFFPALTGTNTKMSASNTSTTIYLTDTPEEIQSKINKHAFSGGGETLEEHRKNGANLEIDIPYLWLQFFLDDDEKLAHVAEEYGAGRMLTGEVKEELGKRLTEIMLNHQAAKSGVTDEVVHEYMKIRPL 390

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A0M0JKY9_9EUKA (Tryptophan--tRNA ligase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKY9_9EUKA)

HSP 1 Score: 348 bits (893), Expect = 2.590e-115
Identity = 173/286 (60.49%), Postives = 220/286 (76.92%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD 858
            ++YLQ+ F   LV+Q+TDDEKFL+K  L+L+E HRLA+ENA+DIIACGFD+ KT +FSDLDYI HMYP IL+IQK+ TYN V+G FGF + D+IG  AFPAVQAAPSFS++FP       ++ CLIPCAIDQD YFRMTRD+AP+LG+ KP+L+H+KFFP + GP  KMSAS+A +AIY TDTP +IK+KV    FSGG+ET+EL R++G N DVDV+YQ+L FF  DD +L  +  +Y++GRM TGE+K  LI  +T +V  HQ  RA VTD  +R FM  RPLD
Sbjct:  113 TKYLQDVFKCVLVVQMTDDEKFLWKD-LELEECHRLAFENAKDIIACGFDITKTLIFSDLDYISHMYPNILKIQKATTYNQVKGIFGFTDSDHIGKHAFPAVQAAPSFSSSFPHIFGSRVDVPCLIPCAIDQDPYFRMTRDVAPRLGFLKPSLMHAKFFPAMTGPGTKMSASDASTAIYCTDTPKQIKEKVNKHAFSGGRETVELHRQLGGNCDVDVSYQWLTFFEFDDAKLKHVHEEYSSGRMLTGEIKAELISVITPLVERHQAARARVTDGIVRAFMTPRPLD 397

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BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Match: A0A2R5GGZ1_9STRA (Tryptophan--tRNA ligase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGZ1_9STRA)

HSP 1 Score: 346 bits (888), Expect = 2.650e-115
Identity = 175/286 (61.19%), Postives = 223/286 (77.97%), Query Frame = 1

Query:    4 SRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGFDMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAFPAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYAKPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGS-CFSGGQETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVKKVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD 858
            ++YLQEAFD PLVIQLTDDEKFL+K  L L+EA+ LAYENA+DIIA GFD  KTF+FS++DY+GH+Y  +LRIQK  T N V+G FG  E  +IG  +FPA+QAAPSFS+AF +PL+G  ++ CLIPCAIDQD YFR+TRD+AP+LG+ KP LIHSKFFP L G + KMSAS   S+I++TDTP  IK KV    FSGG ETLE  R+ GAN++VD++YQ+LRFFL+DD++L  I  +Y +GRM TGEVK+ L++ L+ +V + Q  RA+V+DE L  FM VRPLD
Sbjct:  117 TKYLQEAFDVPLVIQLTDDEKFLWKD-LTLEEANYLAYENAKDIIAVGFDPKKTFIFSNIDYMGHLYETVLRIQKKVTLNQVKGAFGMTESMSIGQHSFPAIQAAPSFSSAFAIPLRGQTDLPCLIPCAIDQDPYFRVTRDVAPRLGFRKPGLIHSKFFPALQGAQTKMSASSETSSIFLTDTPDIIKTKVMKYAFSGGGETLEEHRKNGANLEVDISYQWLRFFLDDDEKLEHIAEEYGSGRMMTGEVKQTLVDVLSDIVLKFQADRAKVSDEILAEFMSVRPLD 401

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig7143.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3YIG7_HETAK	4.030e-136	69.58	Tryptophan--tRNA ligase n=1 Tax=Heterosigma akashi...	[more]
D8LNT5_ECTSI	4.350e-136	70.53	Tryptophan--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A4D9CRR7_9STRA	6.100e-134	70.53	Tryptophan--tRNA ligase n=1 Tax=Nannochloropsis sa...	[more]
A0A835ZE99_9STRA	1.090e-128	69.82	Tryptophan--tRNA ligase n=1 Tax=Tribonema minus Ta...	[more]
A0A7S0XFQ6_9STRA	8.380e-128	66.08	Tryptophan--tRNA ligase (Fragment) n=1 Tax=Chromul...	[more]
A0A7S1UFR9_9STRA	7.970e-124	72.11	Tryptophan--tRNA ligase (Fragment) n=1 Tax=Phaeomo...	[more]
F0VBM7_NEOCL	7.900e-117	65.12	Tryptophan--tRNA ligase n=1 Tax=Neospora caninum (...	[more]
A0A7S3PML0_9STRA	8.840e-117	60.00	Tryptophan--tRNA ligase n=2 Tax=Aplanochytrium sto...	[more]
A0A0M0JKY9_9EUKA	2.590e-115	60.49	Tryptophan--tRNA ligase n=1 Tax=Chrysochromulina t...	[more]
A0A2R5GGZ1_9STRA	2.650e-115	61.19	Tryptophan--tRNA ligase n=1 Tax=Hondaea fermentalg...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig7143	contig	P-wetherbeei_contig7143:135..2542 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	2880.D8LNT5
PFAMs	tRNA-synt_1b
Model size	858
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00055,RC00523
KEGG ko	ko:K01867
KEGG Reaction	R03664
KEGG Pathway	ko00970,map00970
KEGG Module	M00359,M00360
Hectar predicted targeting category	other localisation
GOs	GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006469,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008285,GO:0009058,GO:0009059,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010835,GO:0016070,GO:0016874,GO:0016875,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022603,GO:0030234,GO:0031323,GO:0031324,GO:0031334,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0032991,GO:0033673,GO:0034641,GO:0034645,GO:0034660,GO:0042127,GO:0042325,GO:0042326,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043436,GO:0043549,GO:0043603,GO:0043604,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045765,GO:0045859,GO:0045936,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051239,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0090304,GO:0098772,GO:0140098,GO:0140101,GO:1901342,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:2000026
Exons	6
Evalue	7.13e-137
EggNOG OGs	COG0180@1\|root,KOG2145@2759\|Eukaryota
EC	6.1.1.2
Description	tryptophanyl-tRNA aminoacylation
Cds size	858
COG category	J
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig7143.1.1	prot_P-wetherbeei_contig7143.1.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig7143 135..2542 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186961.4523578-CDS-P-wetherbeei_contig7143:134..280	1683186961.4523578-CDS-P-wetherbeei_contig7143:134..280	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig7143 135..280 +
1683186961.4658487-CDS-P-wetherbeei_contig7143:583..667	1683186961.4658487-CDS-P-wetherbeei_contig7143:583..667	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig7143 584..667 +
1683186961.4764097-CDS-P-wetherbeei_contig7143:1045..1214	1683186961.4764097-CDS-P-wetherbeei_contig7143:1045..1214	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig7143 1046..1214 +
1683186961.4866128-CDS-P-wetherbeei_contig7143:1563..1737	1683186961.4866128-CDS-P-wetherbeei_contig7143:1563..1737	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig7143 1564..1737 +
1683186961.5077977-CDS-P-wetherbeei_contig7143:2012..2164	1683186961.5077977-CDS-P-wetherbeei_contig7143:2012..2164	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig7143 2013..2164 +
1683186961.5213516-CDS-P-wetherbeei_contig7143:2409..2542	1683186961.5213516-CDS-P-wetherbeei_contig7143:2409..2542	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig7143 2410..2542 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig7143:135..2542+
coding sequence from alignment at P-wetherbeei_contig7143:135..2542+

protein sequence of mRNA_P-wetherbeei_contig7143.1.1

>prot_P-wetherbeei_contig7143.1.1 ID=prot_P-wetherbeei_contig7143.1.1|Name=mRNA_P-wetherbeei_contig7143.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
ISRYLQEAFDAPLVIQLTDDEKFLFKAALDLDEAHRLAYENARDIIACGF
DMGKTFMFSDLDYIGHMYPVILRIQKSATYNLVRGFFGFKEGDNIGMAAF
PAVQAAPSFSAAFPVPLKGAANMLCLIPCAIDQDAYFRMTRDLAPKLGYA
KPALIHSKFFPGLAGPRGKMSASEAMSAIYVTDTPGKIKKKVGSCFSGGQ
ETLELQREIGANIDVDVAYQYLRFFLEDDDRLAAIGADYAAGRMTTGEVK
KVLIEELTAMVTEHQRRRAEVTDETLRRFMEVRPLD

mRNA from alignment at P-wetherbeei_contig7143:135..2542+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig7143.1.1 ID=mRNA_P-wetherbeei_contig7143.1.1|Name=mRNA_P-wetherbeei_contig7143.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2408bp|location=Sequence derived from alignment at P-wetherbeei_contig7143:135..2542+ (Phaeothamnion wetherbeei SAG_119_79)
ATCAGCAGGTATCTGCAGGAGGCGTTCGACGCACCGCTGGTGATCCAGCT
GACGGACGACGAGAAATTCCTCTTTAAGGCCGCCCTTGACCTCGACGAGG
CGCACCGCCTCGCTTACGAGAACGCCCGCGACATCATCGCATGCGGGTCA
GTCTCGACCTCAGCATCTGCCTCGGCATCAGCCCGCTTTCGGTTTCGTTG
CATTTCTTCCGTCCTTCGTTTCGTTTGGTTTGGCGTGTTGTTTGCCTTGT
CTAAGCAATCCTTCCTGTCTTGGATAACTTCATGGGGACGATGCAAGTGT
TGAAAAAGGCTGTTGCCAGCAGCGCGAGGTTGGCCCGGCCCGCCTCCGCG
TCCTTGTCAAATTCTCATGTCTTCCAACTTCGTCGCTGCACCGGCGGGGC
ACAATCGCTGCGAACCGTGTTGAAACGACACGTTTCGAGAGGCCATCAGA
TTCGATATGGGCAAGACGTTCATGTTCAGCGACCTCGACTACATCGGACA
CATGTACCCCGTCATCCTCCGCATTCAAAAGAGGTGGGTAAAGCGAATTG
GCGGAGTGGTGGCTCGATCGTTTGATGGTTTCTGTCGTTGCTGTTGCTGG
GGCAGATTCTGTGAAGGGCTCCGTTGGTGTATTGACGGACGTGCCTAGGC
CAGGGATCGCGGGGCAGGTGGCTGTGGGACGCTTCTTCGCCGGGGTTTCA
GGTGGTGGCTGTGAGACAAGAAGGAAGTTCGGCTCACAGGTTGAGTGCCT
GTTGTCCGACCACTTTATCATCGCTTTTCCGCCACGGCAGCCCGCTGCCT
GCTGTCGCCACCGTCGGCGCCGCCGCCACCTACCTAACCATCCGCTGTTC
TCCCTGCTCGCCCTCATCCCGCATTCCTCCCCCTGAATGGCAATGGCGCG
AGAAACGACAGCGCGACGTACAACCTTGTGCGGGGCTTCTTCGGCTTCAA
GGAAGGCGACAATATCGGCATGGCGGCCTTCCCGGCCGTGCAGGCGGCGC
CGTCCTTCTCGGCGGCCTTCCCCGTGCCGCTCAAGGGCGCCGCCAACATG
CTGTGCCTCATCCCCTGCGCCATCGACCAGGTGTGGCCGGCCATCTATTC
GTCTGTTTTCACTGCGTCGGTCCATCCTTGCGTCATCAGTTCATCCCTGC
GTTTGAACTTTCGCGCGGCAGCTCCGTCCTCCGTCCGTTCGGCACTTGCA
GTTCGTTTCGTTTACTTTTATTTTGTTCTGCTTTGGATTTGTGCAGGCAA
GCCCGTTTTTCTTTTCTGTCCTGCGCCTTGTCGCGCGTCCTTTGCTTCTA
CCTCTCGTTGTGGCGGAATTCCCTACAACTTTGCGAGAGAACAAATAATG
CGGCCTTGTGATGCTTTGCCATGGCTGCTTCCCTACCCACAACAACACTG
CGTTTCTACGCTGCATGCGAGCAAAACAGGACGCCTACTTTCGGATGACG
CGGGACTTGGCGCCCAAGCTGGGGTACGCTAAGCCGGCGCTGATCCACAG
CAAGTTCTTCCCGGGGCTGGCAGGGCCGCGTGGCAAGATGAGCGCCAGCG
AGGCCATGTCGGCCATCTACGTCACCGACACGCCCGGCAAGATCAAGAAG
AAGGTAAGTGGAGGGGAACTGGGGAAGAGAGCGCGAGCAGTGAGCGGGCT
GGCGGAAGCCGTTTTTCTACTATTCCGGTCTTCCACTCGTTCATAATTGC
CCTGCTGCGCCGTCGGTACGCCTACTCCGGCTCTCTTCATTTCTCTCACT
AGCAGTGGCGATTACGCCATACCTATGCTGACCTCCGGAAATATCCCGTC
TGTTTTCCCGTGTCATGTCTGCCTGTGTCATGTTGACTCATTGTTGCCAC
TGACTCGTATTGTGCTACGTCTGATTAGGTGGGGAGCTGCTTCAGCGGGG
GCCAAGAAACGCTGGAGCTGCAGCGGGAGATAGGGGCCAACATCGACGTG
GACGTGGCCTACCAGTACCTCCGCTTCTTCCTTGAGGACGATGACCGCCT
GGCTGCCATCGGGGCCGACTATGCCGCTGGGTGAGGCAGCAGTCATTCGG
TCACTGGTTGACAGAAACATTGTTGTTTCTGTATTTGGTTCGTTTGTTTC
TAGGGAAATGGTTTGGGCGGGATGAACCGTTCGGTTTGGTGCGCGAGTGG
AGCATCCTCCGACTGTTGTTATTACTGCGAGGATGTTCTTCTCACTCATC
TCGCGCGCTTTATGTTTTCTTTTGTACCGTCGTTACCACTCTTGACATCG
GTCGCACTTCCGCTTTCCACGCTAGGCGCATGACGACGGGAGAGGTGAAG
AAGGTGCTGATCGAGGAGCTCACCGCTATGGTGACGGAGCACCAGCGGCG
GCGCGCCGAAGTCACCGATGAGACGCTGCGCCGCTTCATGGAGGTCCGAC
CGCTGGAC

Coding sequence (CDS) from alignment at P-wetherbeei_contig7143:135..2542+

>mRNA_P-wetherbeei_contig7143.1.1 ID=mRNA_P-wetherbeei_contig7143.1.1|Name=mRNA_P-wetherbeei_contig7143.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig7143:135..2542+ (Phaeothamnion wetherbeei SAG_119_79)
ATCAGCAGGTATCTGCAGGAGGCGTTCGACGCACCGCTGGTGATCCAGCT
GACGGACGACGAGAAATTCCTCTTTAAGGCCGCCCTTGACCTCGACGAGG
CGCACCGCCTCGCTTACGAGAACGCCCGCGACATCATCGCATGCGGATTC
GATATGGGCAAGACGTTCATGTTCAGCGACCTCGACTACATCGGACACAT
GTACCCCGTCATCCTCCGCATTCAAAAGAGCGCGACGTACAACCTTGTGC
GGGGCTTCTTCGGCTTCAAGGAAGGCGACAATATCGGCATGGCGGCCTTC
CCGGCCGTGCAGGCGGCGCCGTCCTTCTCGGCGGCCTTCCCCGTGCCGCT
CAAGGGCGCCGCCAACATGCTGTGCCTCATCCCCTGCGCCATCGACCAGG
ACGCCTACTTTCGGATGACGCGGGACTTGGCGCCCAAGCTGGGGTACGCT
AAGCCGGCGCTGATCCACAGCAAGTTCTTCCCGGGGCTGGCAGGGCCGCG
TGGCAAGATGAGCGCCAGCGAGGCCATGTCGGCCATCTACGTCACCGACA
CGCCCGGCAAGATCAAGAAGAAGGTGGGGAGCTGCTTCAGCGGGGGCCAA
GAAACGCTGGAGCTGCAGCGGGAGATAGGGGCCAACATCGACGTGGACGT
GGCCTACCAGTACCTCCGCTTCTTCCTTGAGGACGATGACCGCCTGGCTG
CCATCGGGGCCGACTATGCCGCTGGGCGCATGACGACGGGAGAGGTGAAG
AAGGTGCTGATCGAGGAGCTCACCGCTATGGTGACGGAGCACCAGCGGCG
GCGCGCCGAAGTCACCGATGAGACGCTGCGCCGCTTCATGGAGGTCCGAC
CGCTGGAC