mRNA_P-wetherbeei_contig7142.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A6H5JR94_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR94_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 6.930e-20 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 1 ETKLVFSLRAIKQRLDNEANGK-TFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAVAR 333
+ +L+ L+ +K+++D E+ GK +FSFTKIILK GTI K+L RI VFQS DH N G ++KD + + H L + + C + H+ R D +GLREF VMLAV R
Sbjct: 32 QRRLIEGLQDLKRQMDEESGGKESFSFTKIILKLGTIEKILHRINAVFQSVDHGNKGHVTKDELKEGLRRAHVDLGDEWEDTNIDDC-LQHLHGRDDKVGLREFVVMLAVGR 142
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: D8LMR6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR6_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 5.520e-18 Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 1 ETKLVFSLRAIKQRLDNEANGK-TFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAVAR 333
+ +L+ L+ +K+++ E+ K +FSFTKIILK GTI K+L+RI VF+S DH N G ++KD + + H L + + C + H++ R D +GLREF VMLAV R
Sbjct: 32 QRRLIEGLQDLKRQMAEESGEKESFSFTKIILKLGTIEKILQRINAVFKSVDHGNKGHVTKDELKEGLHRAHVDLGDEWEDTNIDDC-LQHLQGRDDKVGLREFVVMLAVGR 142
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A7S2UXD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXD7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.960e-13 Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 1 ETKLVFSLRAIKQRLDNEANGKTFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAVA 330
+ K+V +LR K++L+ KT F +I+LKFGTI+KV+ ++ VF FD + DG + F+ A+ + LS ++Q +F+V D+T + LGL+EF V+LA++
Sbjct: 46 DRKIVQALRRKKEQLERAGRLKT-KFDRILLKFGTINKVMDHLQQVFNQFDDNCDGFMDMGEFQRALGEVDANLSLDELQEIFQVSDLT----KEHKLGLKEFIVVLAIS 150
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A7S3UWH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWH3_HETAK) HSP 1 Score: 73.2 bits (178), Expect = 3.380e-13 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 1 ETKLVFSLRAIKQRLDNEANGK-TFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAVA 330
E K++ +LR ++ L A GK F +I+LKFGTI KV++ +R VF FD + + + +D F A + + +LS ++ LF+V D+TH TLG++EF VML V+
Sbjct: 42 ERKIIQALRRQREYLG--AQGKLNMKFDRIMLKFGTISKVMKHLRQVFAQFDTNGNMVLDQDEFLKAAQEMQVELSREELAELFDVSDLTH----EHTLGMKEFVVMLCVS 146
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A835YSL5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.530e-12 Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 19 SLRAIKQRLDN-EAN-GKTFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAVAR 333
+LR K LD+ +A+ FSF KI+LK GTI +VLRR++ V+ S D D DG +S D F+ A + + L V +F +C + E L R+F VMLAVAR
Sbjct: 42 ALRDRKWELDHADADLASAFSFAKIVLKLGTIKRVLRRVQSVYTSCDADCDGKVSCDDFKRACQDMRLGLEAGAVDKVFAICGV----ENSAQLSFRDFTVMLAVAR 144
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A836CAN3_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN3_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 6.900e-10 Identity = 36/88 (40.91%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 70 FSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAVAR 333
FSFTKI+LK GTI +VL + + F D DG +S+ A E + EA + N+F C+ +LGLR F V+LAVAR
Sbjct: 60 FSFTKILLKMGTIKRVLAHVELAFAELAQDEDGRVSRQQLLQACEDAQVPMDEAILDNVFAACEAAD----GGSLGLRGFVVLLAVAR 143
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A7S3XZL5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZL5_HETAK) HSP 1 Score: 60.8 bits (146), Expect = 1.670e-8 Identity = 37/110 (33.64%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 4 TKLVFSLRA-IKQRLDNEANGKT-FSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAV 327
+K+ +L+A +K+ + + G+ +FT+I+LKF I KV++R++ VF +D D DG I+ + + A+ L KL+ ++++LF + D+ TL L+EF V L V
Sbjct: 22 SKIKTALKAKLKETEELKKQGRDPINFTRILLKFQIIRKVIKRVQRVFTEYDKDKDGHITFEELQDALVKLQVKLTREEIRDLFNLSDLMGYH----TLNLKEFLVALTV 127
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: D8LL80_ECTSI (Calcium ion binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL80_ECTSI) HSP 1 Score: 55.5 bits (132), Expect = 1.260e-6 Identity = 34/109 (31.19%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 1 ETKLVFSLRAIKQRLDNEANGKTFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAV 327
++KL+ +L++ K+ + + SFT+++LK GT+ + IR VFQ D D G I AM+ L LSE +++ LF++ D ++ L +++F V+LA+
Sbjct: 21 QSKLMVALQSKKEEYRTKFKQE-MSFTRVLLKLGTVRTFMNDIRRVFQERDTDQSGRIDMCEMSTAMKDLKVNLSEDEIKALFKMADFYEDKQ----LTMKQFLVVLAM 124
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A5J5C0K2_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5C0K2_9ASTE) HSP 1 Score: 54.3 bits (129), Expect = 2.630e-6 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 58 NGKTFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAV 327
N S II++F + L+ IR VF+ +D D++G+I D R +E+L L+E ++ +LF CD+ R + +EF V+L +
Sbjct: 55 NNSFRSINGIIMRFPQFKEGLKNIRGVFERYDEDSNGTIDSDELRSCLENLQLHLTEKEIDDLFNSCDIDGSRG----IQFKEFIVLLCL 140
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Match: A0A8B8JUH6_ABRPR (probable calcium-binding protein CML22 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JUH6_ABRPR) HSP 1 Score: 52.4 bits (124), Expect = 9.870e-6 Identity = 33/109 (30.28%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 1 ETKLVFSLRAIKQRLDNEANGKTFSFTKIILKFGTIHKVLRRIRVVFQSFDHDNDGSISKDGFRLAMEHLHCKLSEADVQNLFEVCDMTHVRERRDTLGLREFYVMLAV 327
E KL + IK+ E K S I + F T + L+ +RV+F+ +D +++GSI + + +EHL L E + QN+F+ CD+ + + EF V+L +
Sbjct: 21 EEKLERKIAEIKRYKFGERRMK--SIDNIFMMFPTFEEKLKSLRVMFEKYDVNSNGSIEPNELKRLLEHLQLHLPEDESQNIFKYCDI----DGSKGIQFNEFIVLLCL 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7142.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7142.3.1 >prot_P-wetherbeei_contig7142.3.1 ID=prot_P-wetherbeei_contig7142.3.1|Name=mRNA_P-wetherbeei_contig7142.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp ETKLVFSLRAIKQRLDNEANGKTFSFTKIILKFGTIHKVLRRIRVVFQSFback to top mRNA from alignment at P-wetherbeei_contig7142:2298..2963+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7142.3.1 ID=mRNA_P-wetherbeei_contig7142.3.1|Name=mRNA_P-wetherbeei_contig7142.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig7142:2298..2963+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7142:2298..2963+ >mRNA_P-wetherbeei_contig7142.3.1 ID=mRNA_P-wetherbeei_contig7142.3.1|Name=mRNA_P-wetherbeei_contig7142.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig7142:2298..2963+ (Phaeothamnion wetherbeei SAG_119_79)back to top |