mRNA_P-wetherbeei_contig7142.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7142.1.1
Unique NamemRNA_P-wetherbeei_contig7142.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: D8LMR7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR7_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.100e-29
Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D+ ALK KA QL+ER R EK+ RL+AE KT+ V  KV++LS+H+EKLM++LK EA  K+KA +Q RR QK++E  +ARS AL     A++ + TELREGSKILEDQLRLMDEKYMELR
Sbjct:  487 DIMALKVKATQLVERLRHEKSARLKAERKTQKVAGKVQVLSDHIEKLMMFLKHEATQKAKAHEQQRRLQKELELVKARSTALLRSNQAKDRVTTELREGSKILEDQLRLMDEKYMELR 604          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A7S2B9G0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9G0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.100e-26
Identity = 67/118 (56.78%), Postives = 87/118 (73.73%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D+  LK KA+ L+ER ++EK  RLRAEA T+    KV  LS+H+EKLML+LK EA  K+KA +   RA ++V   RAR+ AL ++A +R+ +I EL EG+KILEDQLRLMDEKYMELR
Sbjct:   47 DLTLLKAKAMSLLERQKNEKELRLRAEAATKASNKKVLALSQHIEKLMLHLKHEAASKAKAHEAAGRAAQEVSLLRARNAALGKRAASRDSIIKELTEGAKILEDQLRLMDEKYMELR 164          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A835YJ85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ85_9STRA)

HSP 1 Score: 108 bits (269), Expect = 6.550e-26
Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D+ AL+ + LQL+E  R EK RRLRA  +       V+ LSEHVEKLM YLK EA  K++A +Q  R QK+VE  RAR  AL  +A A+   I+ELREGSKILEDQLRLMD KY+ELR
Sbjct:   32 DIAALRSRCLQLVEALRQEKGRRLRAVGEGERQAGHVRALSEHVEKLMAYLKHEAAAKARAHEQQLRLQKEVELLRARGAALERKAAAKSRAISELREGSKILEDQLRLMDAKYVELR 149          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A7S2RYH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYH1_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.080e-25
Identity = 62/108 (57.41%), Postives = 81/108 (75.00%), Query Frame = 1
Query:   31 QLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            QL+ER ++EK  RLRAEA T+    K+  LS+H+E+LML+LK EA  K+KA +   RA ++V   R R+  L ++AGAR+ +I ELREG+KILEDQLRLMDEKYMELR
Sbjct:    1 QLLERQKAEKESRLRAEAATKLANKKILALSQHIERLMLHLKHEAASKAKAHEAAGRATQEVSLLRQRNGVLTKRAGARDQVIVELREGAKILEDQLRLMDEKYMELR 108          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A8J2SP64_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP64_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.620e-24
Identity = 63/118 (53.39%), Postives = 87/118 (73.73%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            DV ALK KA +L+ R ++EK +R +AEA+ +    KV  LS+HVEKLM++LK E   K++  DQ RRA+KD++ A+ RS+ LA +  ARE  + EL+EGSKILEDQL+LMD +Y+ELR
Sbjct:  320 DVRALKHKATELLARGKAEKDQRQKAEAEAKLTGKKVAALSDHVEKLMVHLKHEVGAKAQVTDQLRRAEKDLDTAKLRSRTLARRNNAREKFVLELKEGSKILEDQLKLMDRRYLELR 437          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A7S2DJE2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJE2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.820e-24
Identity = 63/118 (53.39%), Postives = 87/118 (73.73%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D+  LK +   L++R R EK  R RAEA T++   KV LLS+HVEKLML+LK EA+ K+KA++   RA ++V   R R++AL ++A +++ +I EL EG+KILEDQLRLMDEKYME+R
Sbjct:   14 DLLNLKGRQAALVDRQRQEKENRSRAEAATKNAIKKVVLLSQHVEKLMLHLKHEAVSKAKAQEAAGRAAQEVSLMRTRNKALNKRAASKDVMIRELSEGAKILEDQLRLMDEKYMEIR 131          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A812Y6I0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y6I0_SYMMI)

HSP 1 Score: 102 bits (253), Expect = 1.910e-23
Identity = 63/118 (53.39%), Postives = 84/118 (71.19%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D+ ALK KA+ L+ER R EK  +LR E + +    K+++LS+HVEKLM++LK EA  K KA DQ R ++K   A +     ++ +A A++ LI ELREGSKILEDQLRLMDEKY+ELR
Sbjct:  204 DIRALKAKAISLVERIRQEKEDKLRIEGEQKQYAKKIEMLSDHVEKLMIHLKHEAAAKIKAVDQLRASEKRNRAVQDNLDLVSRKAAAKDRLIAELREGSKILEDQLRLMDEKYLELR 321          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A7S1UHS9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHS9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.560e-22
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D+ AL+ +A  L  R R EK  + RAE   R    KV  LS+H+EKLML+LK EA  K+KA +  RRAQ++    R R+QAL ++  ARE +I E++EGSKILEDQLRLMDEKY+ELR
Sbjct:  293 DMKALRMRATHLASRHRQEKEAKYRAEDALRSSNKKVAALSDHIEKLMLHLKHEAASKAKAFELQRRAQRETTLLRKRNQALVKRNTARERVILEMQEGSKILEDQLRLMDEKYLELR 410          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A2D4C9H6_PYTIN (JmjC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9H6_PYTIN)

HSP 1 Score: 93.2 bits (230), Expect = 1.060e-19
Identity = 54/118 (45.76%), Postives = 83/118 (70.34%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            D   LKE+ ++L  R R EK  R++A+A  ++  +++  LSEH+EKLM++LK EA  K+KA D  RR +K++   R +  +L ++A  +E+ I EL +G+KILEDQLRLMDEK++E+R
Sbjct:  736 DYQTLKERVVELASRERVEKELRVKADASNKEAGERIVALSEHIEKLMVHLKHEAAAKTKAVDLQRRTEKELSECRDKLSSLTKKAAQKEEQIQELEQGAKILEDQLRLMDEKFIEVR 853          
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Match: A0A024U713_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U713_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.620e-19
Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 1
Query:    1 DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLYLKQEAIGKSKARDQHRRAQKDVEAARAR----SQALAEQAGAREDLITELREGSKILEDQLRLMDEKYMELR 354
            DV ALKEK  +L  R R+EK  R R +A   +  +K+  LSEH+EKLM++LK EA  K+KA+D    A K VEA R      S +L ++  A++ +I+EL++GSKILEDQLRLMDEKY+ELR
Sbjct:  436 DVKALKEKTAELAGRQRTEKELRTRTDAALVEANEKIVALSEHIEKLMVHLKHEAAAKAKAQD----ALKAVEAERRELIDASTSLTKKTNAKDRVISELQQGSKILEDQLRLMDEKYIELR 553          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7142.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMR7_ECTSI1.100e-2961.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2B9G0_9STRA2.100e-2656.78Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YJ85_9STRA6.550e-2657.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RYH1_9STRA5.080e-2557.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SP64_9STRA6.620e-2453.39Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2DJE2_9STRA9.820e-2453.39Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A812Y6I0_SYMMI1.910e-2353.39Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S1UHS9_9STRA3.560e-2254.24Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A2D4C9H6_PYTIN1.060e-1945.76JmjC domain-containing protein n=1 Tax=Pythium ins... [more]
A0A024U713_9STRA2.620e-1951.64Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7142contigP-wetherbeei_contig7142:1..1026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMR7
Model size354
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.8e-30
EggNOG OGs2CN38@1|root,2QTP6@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-02_003390.1
Cds size354
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186961.3395023-CDS-P-wetherbeei_contig7142:0..991683186961.3395023-CDS-P-wetherbeei_contig7142:0..99Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7142 1..99 -
1683186961.354407-CDS-P-wetherbeei_contig7142:420..5671683186961.354407-CDS-P-wetherbeei_contig7142:420..567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7142 421..567 -
1683186961.364836-CDS-P-wetherbeei_contig7142:918..10261683186961.364836-CDS-P-wetherbeei_contig7142:918..1026Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7142 919..1026 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7142.1.1prot_P-wetherbeei_contig7142.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7142 1..1026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7142.1.1

>prot_P-wetherbeei_contig7142.1.1 ID=prot_P-wetherbeei_contig7142.1.1|Name=mRNA_P-wetherbeei_contig7142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
DVGALKEKALQLMERARSEKARRLRAEAKTRDVQDKVKLLSEHVEKLMLY
LKQEAIGKSKARDQHRRAQKDVEAARARSQALAEQAGAREDLITELREGS
KILEDQLRLMDEKYMELR
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mRNA from alignment at P-wetherbeei_contig7142:1..1026-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7142.1.1 ID=mRNA_P-wetherbeei_contig7142.1.1|Name=mRNA_P-wetherbeei_contig7142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig7142:1..1026- (Phaeothamnion wetherbeei SAG_119_79)
GACGTAGGGGCGCTCAAAGAGAAGGCGCTGCAGCTGATGGAGCGTGCCCG GAGCGAAAAGGCGCGGCGTCTGCGCGCAGAGGCCAAGACTCGGGACGTGC AGGACAAGGTGAGGGGAAGCACCCAAAGAACCTAACTTCGCCGTGATACT TCTCTGTCTTTTCTGCCCTTTGGTTTTGATCATGATACGTGTCGCTTAAG AGAGCCTGCAGGTTGGATGCCTGCATCTCACGTATGGTCCAGTAGCGAGG CCGGATTCCATAGCCAGTTTAAAAAGCAGCCATGGTTGCCGAGGAAACAT TCCTTCGCTACTCTTGAAGTAGCTCCTAATGAAAGCGTTGCCTACTTCTT TCGCTTAAAAAGCTGCCCTGAAAGAGTGCCCACATTACCCCGAGCTAACG TGTCCATCAAGCTCCCCCTGGGGAAGAAATCCTGCCACGGCCGCTCGCTG CCGTCGCAGGTGAAGCTGCTGTCGGAGCACGTGGAGAAGCTGATGTTATA TCTGAAGCAGGAAGCCATCGGCAAGTCCAAAGCCCGCGACCAGCACCGCC GCGCGCAGAAGGACGTTGAGGCCGCGCGGGCCCGCAGTCAGGCGCTGGCG GAGCAGGTACGGTGCTTCTCACTCACTTATCTAGCGTCGGCGGCTAATAA GTTCGCCTTTCCGGAACCGCCACTGTCTGAATTTCGGGAGTTCGTTGCGT GGTTCCTGGCAGGAAACGTTGATCCGTCCAAACCTTACTGTCCGCAGCTA GGTGCCTCGAGGCCTTTCCGGCTGTCGTACCTGAACATTCGTCATTTGGC AAACCTTCACCTCGCGCAAATCCTGCTTCTTTCTTTTAACCAATTCATTC TAGCACGCTTTCCTCGCCGACGGGCCCTTTCGGGCATGCCTCTGGACAAA CGTGCCACAATGTGACACGACAACCAGGCGGGTGCCCGGGAGGACCTCAT CACGGAGCTGCGGGAGGGCTCCAAGATCCTCGAGGACCAGCTGCGCCTCA TGGACGAAAAGTACATGGAGCTCCGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7142:1..1026-

>mRNA_P-wetherbeei_contig7142.1.1 ID=mRNA_P-wetherbeei_contig7142.1.1|Name=mRNA_P-wetherbeei_contig7142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig7142:1..1026- (Phaeothamnion wetherbeei SAG_119_79)
GACGTAGGGGCGCTCAAAGAGAAGGCGCTGCAGCTGATGGAGCGTGCCCG
GAGCGAAAAGGCGCGGCGTCTGCGCGCAGAGGCCAAGACTCGGGACGTGC
AGGACAAGGTGAAGCTGCTGTCGGAGCACGTGGAGAAGCTGATGTTATAT
CTGAAGCAGGAAGCCATCGGCAAGTCCAAAGCCCGCGACCAGCACCGCCG
CGCGCAGAAGGACGTTGAGGCCGCGCGGGCCCGCAGTCAGGCGCTGGCGG
AGCAGGCGGGTGCCCGGGAGGACCTCATCACGGAGCTGCGGGAGGGCTCC
AAGATCCTCGAGGACCAGCTGCGCCTCATGGACGAAAAGTACATGGAGCT
CCGT
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