prot_P-wetherbeei_contig7137.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7137.1.1
Unique Nameprot_P-wetherbeei_contig7137.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length818
Homology
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BLAST of mRNA_P-wetherbeei_contig7137.1.1 vs. uniprot
Match: A0A6H5KI56_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI56_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.600e-30
Identity = 122/332 (36.75%), Postives = 153/332 (46.08%), Query Frame = 0 
Query:  461 RGSAAIEALLFAVLQVLQSEHPAAIHEDAARLLGEIGAVDPYHIHVAAAANKQ----------PGPNEAAGAPHS----DPLMPTKLRALKMLATYLTDRDASVSMRALWTLKAVLSRDADKRCFLRATEGTELHALLLPFYSVRANVRKNARAICRMRRETVDVAGAWAGGSAXXXXXXXXXXXXXXXXXXXXGGCGRYRVDAADGEDPARLPP--AFSEQVWGTSGKTFGRWVRCLTSSLLAECYAEAAEACFTPLAAGIRVAEAPAESVAAAGGSRGGGGDARNSIRWPVQGS-IYGRDEFLALCAAMCGRKAAFAAALFPALVYDLVR 775
            RG A   A + AV++V +SE P A+H +A RL GEIGAVDPY + +A  A+ +           G    AG   S    DPL   K+RAL+MLA+YLTDRDA +S  AL T KA+LSR       L      E+ ALL PF + R      AR   R+          W G                       G       D  + E  +  PP  A S++VW T+GKTF RWV  +TS+LL ECYA     CF   A+                               P +G  + GRDE LALC A+C RK+  AA L PA+VYDLVR
Sbjct: 2069 RGVALARAAVGAVVRVCRSERPPAVHLEAMRLAGEIGAVDPYDVELAERASARGGGRWEGLALTGAGAGAGGRDSSSSEDPLSAPKVRALRMLASYLTDRDADLSACALCTAKALLSRGVGSNERLLKASPAEVQALLGPF-TFRLARMNTARMAARV----------WDG---------------------LFGDTRSSGRDGGEEEGYSLSPPGPALSDEVWTTAGKTFPRWVCGVTSALLLECYAGVTSRCFKNAASKGXXXXXXXXXXXXX--------XXXXXXXXPRRGPRVEGRDEMLALCYALCRRKSELAACLLPAIVYDLVR 2360
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7137.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KI56_9PHAE2.600e-3036.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 382..607
e-value: 2.0E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7137contigP-wetherbeei_contig7137:89..3036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7137.1.1mRNA_P-wetherbeei_contig7137.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7137 89..3064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7137.1.1 ID=prot_P-wetherbeei_contig7137.1.1|Name=mRNA_P-wetherbeei_contig7137.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=818bp
MAMLEPFRSFERMDCGAVRRVLELMVQATQMSNKDGPSIPDISKLLHSIN
VTEILLCLNAKLAAAQRPEAVPRMLEVVGFVVDEVRVEEDSASLKTALHV
VLGLLQRYVEAAAGGGGGGSDAAPGGSGGGAGGEGSNLALSPEGWQRRRQ
ELAVARAKKTQRMPLEEVVTLLGRVLTRCLSTPGGCQELGPHLPLLAATL
VAAFVDLRAAAAAVAPPGFVIAPTSSGLGSPGGGGVGGGIGGDEDGNGEA
GGAAADAEAEEEALKSEQRSVAFRDADAAVCLRVALRLRALLASLVTDAP
PELDAALAQLDPSPIPDGTHGLRGLRNGFWWRRIRVASRTAAAAAASGTG
GIASSAAAAEAGARAGARAADTMADTIGGGARTPAELEAALRKLVGQLEH
GAATRSAIALTTSMSHIRRLLSSSGEAWVALARDDGGGGGIITVGAAAED
DGAGGGISRSRGSAAIEALLFAVLQVLQSEHPAAIHEDAARLLGEIGAVD
PYHIHVAAAANKQPGPNEAAGAPHSDPLMPTKLRALKMLATYLTDRDASV
SMRALWTLKAVLSRDADKRCFLRATEGTELHALLLPFYSVRANVRKNARA
ICRMRRETVDVAGAWAGGSAGGGDGGSGDGDGGAGGFCTGGGCGRYRVDA
ADGEDPARLPPAFSEQVWGTSGKTFGRWVRCLTSSLLAECYAEAAEACFT
PLAAGIRVAEAPAESVAAAGGSRGGGGDARNSIRWPVQGSIYGRDEFLAL
CAAMCGRKAAFAAALFPALVYDLVREEANGLGGIGGRSGARARLSSRFRS
MLRPLRVSAEDEQAIDGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like