mRNA_P-wetherbeei_contig7119.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A835ZBF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF6_9STRA) HSP 1 Score: 185 bits (469), Expect = 4.000e-47 Identity = 92/180 (51.11%), Postives = 119/180 (66.11%), Query Frame = 1
Query: 475 WPFDNLCVTDERITSVSSTAESYGITTDDYVYEN--CVQAPSRVWFISAKSWMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAWTGDYLAYCLCSENDLPDLTEEERLKLFSPCVMFKAD 1008
WP + L + +TSV+ S GI+ +Y + +++ W + WMTDDQK LV LY + A+V T A YFG AAFS+YHLF G YKPVGD QGI YS V QIQ YVPQV +P +PHPLLAT L+ L+ +HI+W+GD+ Y LCS +DLPD+ E+R+KLFSPCV F +D
Sbjct: 502 WPHNGLQLGTGSVTSVTPDVASLGISAGSPLYTDFYVMESHHDPWKVRTGWWMTDDQKILVTLYSITAIVMTVIIAAAYFGKEAAFSIYHLFHGAYKPVGDTQGISYSDVAQIQAYVPQVSIPTIPHPLLATDLSKLNRDHISWSGDFDHYNLCSSSDLPDIKREDRVKLFSPCVHFVSD 681
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA) HSP 1 Score: 180 bits (456), Expect = 5.730e-45 Identity = 96/204 (47.06%), Postives = 123/204 (60.29%), Query Frame = 1
Query: 415 SLRGLEQLIKIIVTLHFYGGWPFDN-LCVTDERITSVSSTAESYGITTDDYVYENCVQAPS-RVWFISAKSWMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAWT---GDYLAYCLCSENDLPDLTEEERLKLFSPCVMFKADH 1011
S L L+K++VTL+FY WPFDN LC T E +T VS + GI VY C S W+I + WM DDQK LV LY + A+V+T AI FGG + VY L+ G YKPVG +G+PYS+V +IQ +VPQV+ LPHPLLAT ++ L T HIA+ DY + LCSE D+P + EEER FS C+ + H
Sbjct: 639 SYLALAVLVKLLVTLNFYANWPFDNELCKTGETVTQVSPEVAALGIAPGATVYGYCATDVSGSPWYIFTEPWMNDDQKTLVHLYSITAIVATVLVAIFCFGGPFCYFVYRLYWGAYKPVGRAKGVPYSRVEEIQAFVPQVKFKLLPHPLLATDISRLDTHHIAFQVQDDDYQKFNLCSEADMPTIPEEERSNFFSRCINYPPAH 842
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: D7FW06_ECTSI (PHM7_cyt domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW06_ECTSI) HSP 1 Score: 135 bits (341), Expect = 5.780e-30 Identity = 78/206 (37.86%), Postives = 108/206 (52.43%), Query Frame = 1
Query: 436 LIKIIVTLHFYGGWPFDNLCVTDERIT-----------------SVSSTAESYGITTDDYVYENCVQAPSRVWFISAKSWMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDD-QGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAWTGDYLAYCLCSENDLPDLTEEERLKLFSPCVMF 999
+I ++V+L FY GWPFD LC TDE + +VS+ S G D VYE C Q S VW + WM DDQ +V ++ +F V T A AI+ FG + S+ L KGVYKPVG + + +++V QI YVP V + HP+LA + + HI+WTGDY AY LC+ P ++ + R F V +
Sbjct: 788 VIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVSTVLPSVG----DMVYETCDQDSSLVWGEGPQEWMPDDQLIIVFIFNLFGYVCTAAVAIILFGKTVLASLRRLCKGVYKPVGRHAKPVGFTEVQQINAYVPGVPYKKSVHPILACDIGNVDEHHISWTGDYQAYNLCTPEAFPGISRKIRANQFGRVVFY 989
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7R9ZSN6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSN6_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.920e-12 Identity = 54/173 (31.21%), Postives = 79/173 (45.66%), Query Frame = 1
Query: 448 IVTLHFYGGWPFDNLC----------VTDERITSVSSTAESYGITTDDYVYENCVQ--------APSRVWFISAKS----WMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAW 900
+++ +++ G+P+DNLC V D IT+ + I DD Y C Q A FI +K WMT++Q+ + +Y + + A ++F G LF+ YK VGDD GIP+SQV I Y+PQVE +PLLA + E W
Sbjct: 29 VLSSYYWSGFPYDNLCQNDTVVSSSYVGDYTITAKNGDTHQVSIVADDTDYRYCRQNLIGSGTLASPGFPFIPSKQGEDRWMTEEQETITFIYGWSTVAVSGVVAFVFFLGWLK-GWLSLFRSSYKSVGDDMGIPFSQVPSINAYIPQVESAMFSYPLLAADSDVIDEELYDW 200
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7S2YLR8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLR8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.070e-11 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 1
Query: 448 IVTLHFYGGWPFDNLCVTDERIT------------SVSSTAESYGITTDDYVYENCVQAPSRVW-------FISAKS-----WMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTE 888
+++ +++ G+PFDN+C ++ S E + D VY C Q R + F WMT DQ+ + ++ + +++ A ++ G V FKG Y+P G+DQ IP+SQV I +Y+PQV P PHPL+ATSL T TE
Sbjct: 197 LLSAYYWSGFPFDNICEQEDSNAFSQLNGDWTIEIKGSGDKEQVSRESSDPVYVFCRQDFFRYYDDERAFPFTPQNQPDGLEWMTSDQELVTNIWGIVSVIVIGA-VLIRLGLYCFTDVKGYFKGDYEPCGEDQNIPFSQVESITSYIPQVNSPVYPHPLVATSLDTFGTE 366
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7S4K519_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K519_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.940e-11 Identity = 62/219 (28.31%), Postives = 95/219 (43.38%), Query Frame = 1
Query: 394 TNASTLASLRGLEQLIKIIVTLHFY--GGWPFDNLCVTDE--RITSVSSTAESYGITTDDYVYENCVQAPSRV-----------WFISAKSWMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAWTGD---YLAYCLCSENDL----PDLTEEERLKLFS 984
T +TL+ L I + L Y G+P+DNLC +E + V + +Y C Q + W WMT DQ+ + R+Y + V+ A L F S+ +F+G YKP GDDQGI +S V I Y+P+V + +P PL+A+ + L E W Y Y L + +L D T++ ++F+
Sbjct: 812 TRIATLSRKYFLSVAIVAMAVLGSYHWSGFPYDNLCDGEETDQYQGVWMVDGKEELVVSNYTVRYCKQDLLDLDDIIAFPALPKWQPEGDEWMTADQERITRIYG-WTSVAVLAGVCLIFIKGIITSMKDMFRGTYKPCGDDQGINFSDVKSIAAYIPEVSIAFVPFPLIASDIDGLDEELFEWENPDKPYSCYDLTRDAELLLKGTDCTKDPSKRVFT 1029
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7S1UQA4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQA4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 7.140e-8 Identity = 44/174 (25.29%), Postives = 76/174 (43.68%), Query Frame = 1
Query: 439 IKIIVTLHFYGGWPFDNLCVTD-------------------ERITSVSSTAESYGITTDDYVYENCVQAPSRVWFI-SAKSWMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAW 900
+ +V+ +++ G+PFDNLC + R ++++ ++ D + P+ F S WM+ DQ+++ +Y ++ + + F + FKG YKP GDDQ P+S+V I TY+PQV +PLLA + L + W
Sbjct: 55 VMAVVSSYYWAGFPFDNLCANEGTDSAEYAGNYTLKLGDGGNRTEVITASYPTFRYCLQDMILLEGPSFPAIPQFQPSGGEWMSSDQENITAIYG-WSSIGVLGLIVSSFFWQLFRNFQGCFKGQYKPAGDDQAQPFSEVPSISTYIPQVNSFVFSYPLLACNYKGLSKDLFDW 227
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7S2V6J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J7_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.380e-7 Identity = 48/158 (30.38%), Postives = 72/158 (45.57%), Query Frame = 1
Query: 436 LIKIIVTLHFYGGWPFDNLCVTDERITSVSSTAESYGITTDDYVYENCVQAPSRVWF---ISAKS-WMTDDQKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPH--PLLATSLTTLHTEH 891
L+ +++T H+Y GWPFDN ++ + + SY N V++ + WF + KS W +Q+ LV++Y + +L + Y +V + G Y VG+ QGIPY+ V I TYVP P P PL A L H
Sbjct: 602 LVHLLITAHWYYGWPFDNTYLSSDGVYKYQDK-NSY----------NLVKS-GKFWFAFYVDPKSTWQNAEQQFLVKIYGIASLALLGFLLVFYLYKDIVDTVNWAWYGDYDAVGESQGIPYNAVESITTYVPMSVFPSDPTVGPLPAAYCENLMEHH 747
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7S2VH83_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VH83_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.030e-7 Identity = 49/178 (27.53%), Postives = 81/178 (45.51%), Query Frame = 1
Query: 448 IVTLHFYGGWPFDNLCVTDE---------RITSVSSTAESYGITTDDYVYENCVQ--APSRVWFI--------SAKSWMTDDQKHLVRLYKVFALV------STFAFAILYFGGSAAFSVYH-LFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAWT 903
IV+ ++ G+P+DNLC + ++T + S + + Y C Q P + + S WMT Q+ LV +Y + + V + FA+ I F ++ LF YKP G DQG+ +S+V I +Y+PQV+ Q +PLLA ++ + W+
Sbjct: 271 IVSSYWLSGFPYDNLCADNTSHSAYYGNWQVTDGNGQTSSAVVEPNQRSYHFCNQYIGPGQNFKFPVSPDAQPSGSKWMTSSQEQLVGIYGIVSAVVLGLVCAVFAYRI--------FRLFQKLFSASYKPAGSDQGMHFSEVGTISSYIPQVKSEQFTYPLLAVNVDYVGESIFDWS 440
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Match: A0A7S4MUB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MUB8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.370e-6 Identity = 47/196 (23.98%), Postives = 80/196 (40.82%), Query Frame = 1
Query: 436 LIKIIVTLHFYGGWPFDNLCVTDER-----------------ITSVSSTAESYGITTDDYVY----------ENCVQAPSRVWFISAKSWMTDD-------QKHLVRLYKVFALVSTFAFAILYFGGSAAFSVYHLFKGVYKPVGDDQGIPYSQVHQIQTYVPQVEVPQLPHPLLATSLTTLHTEHIAWTGDYLAY 921
+I +++ +F+ +P+DN+C D I S+ + +T + V E S V + WMT + Q+ L ++Y ++V+ + FGGS +V LF+G Y D I +S V +I YVPQ++ P P P+LA + + I W + +Y
Sbjct: 727 MIMAVISSYFWAQFPYDNVCSCDNTNDYTCGGQDWRGTYNDIILGNSTAIDQIEVTQKEGVIFCQQQLWRLPEFAFPPVSEVQELRQGKWMTSETWEPPGNQESLTKIYGWSSVVALAVYVAFVFGGSVISNVLLLFRGSYSTNTKDSKIDFSTVQEIFAYVPQLDFPAFPFPMLACDVDDIDQNLIGWNDPHGSY 922 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7119.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7119.1.1 >prot_P-wetherbeei_contig7119.1.1 ID=prot_P-wetherbeei_contig7119.1.1|Name=mRNA_P-wetherbeei_contig7119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=258bp MPFLPSPPAPPSAPFTLSLAETDESLTNASTLASLRGLEQLIKIIVTLHFback to top mRNA from alignment at P-wetherbeei_contig7119:342..2346+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7119.1.1 ID=mRNA_P-wetherbeei_contig7119.1.1|Name=mRNA_P-wetherbeei_contig7119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2005bp|location=Sequence derived from alignment at P-wetherbeei_contig7119:342..2346+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7119:342..2346+ >mRNA_P-wetherbeei_contig7119.1.1 ID=mRNA_P-wetherbeei_contig7119.1.1|Name=mRNA_P-wetherbeei_contig7119.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=774bp|location=Sequence derived from alignment at P-wetherbeei_contig7119:342..2346+ (Phaeothamnion wetherbeei SAG_119_79)back to top |