prot_P-wetherbeei_contig7115.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7115.1.1
Unique Nameprot_P-wetherbeei_contig7115.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length478
Homology
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI)

HSP 1 Score: 552 bits (1423), Expect = 2.160e-175
Identity = 306/489 (62.58%), Postives = 364/489 (74.44%), Query Frame = 0
Query:    1 QSPAGALWSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLERFIFEQVFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDD--GGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKK-KVISVGADDLLAALTWVA--ANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATEL---NVRVCPNYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTAIDADGLNAVDYAKSAA---VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSNAT-DATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARGETALMYSVQREGHATPDSQVAAAVMLLAHGADR 477
            Q PA  LWSL+RWLEQELPDVGIF+N+HRAGGGLP MG+LQW DV QHLER IFEQVFD+CL +AP YG GD E+  +LASLRFL+PRHWCVD L D      G+ GREWELAQ ELCR++E RCP+DM+DCVKACV+LVALSVEASL +R  E   +S     K ++ GADD+L ALTWV   +NPPRLASRLW+  YYMR  A G G EGAYCLTQLASAL+FAR ADASVLAD+++ + + GL ++  TQ  I+AA  GD E V   L   ADPNGLS+DQQ TVLTAA+  R   V+K +L+   +++   N ++CPNYG  RGR+ALM+AA  GD+  VL+LL   G + R A  A+G +AVDYA       VASVLLADPAK TLCQAAKAGNL YV+ALLLQ QD N T D TGQFTP+++A  L ++ V+E+LL  P CD N  NARGETALMY  QREG+AT D+QVAAAV LLA GADR
Sbjct: 1238 QGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQWTDVKQHLERHIFEQVFDRCLTSAPVYGRGDEELAAKLASLRFLRPRHWCVDSLKDTDAESAGSYGREWELAQGELCRLVEYRCPLDMLDCVKACVKLVALSVEASLVKRQRELDPSSRSGGLKPVAFGADDILPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMG-EGAYCLTQLASALEFARHADASVLADISEDELNEGLEKHKATQNLIKAAREGDSESVSYWLGAGADPNGLSSDQQFTVLTAAITHRRRGVIKILLEGAWSDMVDPNRQICPNYGVERGRSALMVAAAMGDMATVLSLLRIPGIDRRLAC-ANGKDAVDYAVQQGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNQTSDYTGQFTPIIAAAFLAHIEVLESLLESPLCDPNLPNARGETALMYCSQREGYATGDTQVAAAVKLLAKGADR 1724          
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A835YQM7_9STRA (VPS9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM7_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 5.870e-142
Identity = 293/628 (46.66%), Postives = 354/628 (56.37%), Query Frame = 0
Query:    1 QSPAGALWSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLERFIFEQ-----------VFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDDGGGGGAAGREWELAQREL--------------------CRIIECRCPMDMVDCVKACVRLVALSVEAS-LQRRHSESA---------GNSAKKKKVISVGADDLLAALTWVA--ANPPR----------------------------------------------------LASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATELNVRVCPNYGRRRGRTALMLAA------EGGDITVVLALLGRAGSEGRTAIDADGLNAVDYAK---------SAA-----VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSNATDATGQFTPLVSATLLGNLAVMETLLRHPNCDVN-------------------KRNARGETALMYSVQRE-----------------GHATPDSQVAAAVMLLAHGADR 477
            ++P   LWSLVRW EQEL  +G+F+NSH+AGGGLPVMGDLQW+DV  HLER IF+            VF++CL AAP+Y  GDA +  RLASLRFL+PRHWCVD LDDGGG    GREWELAQREL                    CRI+  +CP D++ C++ACVRLVALSVEAS L +R +             + AK++K +  GADDLLAALTWV   ANPP                                                     LASR+W+M Y+MR     G GEG YCLTQLASA++FA+  DASVLAD+T+ + ++G+  +A TQA I A+  G+ +   +LL E  DPNGLS DQQ+T LTAAV G H+ V+K +L+H +T+ NV VCPNYG  RGRTALMLAA      E G +  VL LL R G   R    A+GL AVDYA          SAA     VAS+LLADP +V L QA  AG L YV ALL Q  D+NA DATGQFTPL+ A L G +   + LLR  + DV                    +RNARGETAL+Y + RE                 G   P  QVA AV LLAHGADR
Sbjct: 1971 RAPPVMLWSLVRWTEQELQGLGVFNNSHKAGGGLPVMGDLQWRDVKHHLERHIFDMLLXXXXXXXXXVFERCLTAAPEYAEGDAAIAYRLASLRFLRPRHWCVDSLDDGGG---YGREWELAQRELXXXXXXXXXXXXXXXXXXXXCRIVHYKCPRDLMGCIRACVRLVALSVEASMLPKRITRLVDFCVALSVEASMAKRQKSVVFGADDLLAALTWVVVQANPPSAFXXXXXXXXXXXXYLGGEGDVDHVLREKNAPKRREAVGKPQTVDKSKQFYWLASRMWFMAYFMRQDDPEGIGEGGYCLTQLASAMEFAKECDASVLADITEEELESGIRAHATTQAMIEASLAGNAQRAAELLREGGDPNGLSTDQQNTALTAAVLGSHLDVMKVLLEHRSTDPNVTVCPNYGPNRGRTALMLAAQRGSLDERGSLDEVLLLL-RRGGVNRGVTCAEGLKAVDYALQGGHKASLLSAAILTSEVASILLADPDRVGLTQAVAAGALPYVRALLRQGCDANAVDATGQFTPLIVAALQGQMGAADVLLREGSADVAVVSIAAIRXXXXXXXXXVCRRNARGETALVYCMGREATQPARXXXXXXXXXXXGRTAPHQQVAFAVKLLAHGADR 2594          
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 9.660e-98
Identity = 224/491 (45.62%), Postives = 282/491 (57.43%), Query Frame = 0
Query:    8 WSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLERFIFEQVFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDDGGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKK-KVISVGADDLLAALTWVAANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATEL---NVRVCPNYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTAIDADGLNAVDYA------------KSAA-----VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSNAT-DATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARGETALMYSVQREGHATPDSQVAAAVMLLAHGAD 476
            W  +         VGIF+N+HRAGGGLP MG+LQW DV QHLER IFEQ             A   +  +  A L         +D   D    G+ GREWELAQ ELCR++E RCP+DM+DCVKACV+LVALSVEASL +R  E   +S     K ++ GADD+L ALTWV                          G   +  TQ  + ++ AR  D+ +   +++     G    A T       +    E V   L   ADPNGLS+DQQ TVLTAA+  R   V+K +L+   +++   N ++CPNYG  RGR+ALM+AA  GD+  VL+LL   G + R A  A+G +AVDYA            K+AA     VASVLLADPAK TLCQAAKAGNL YV+ALLLQ QD N T D TGQ+TP+++A  LG++ V+E+LL  P CD N  NARGETALMY  QREG+AT D+QV   + LLA G D
Sbjct: 1130 WDTIFHQHHMETQVGIFNNNHRAGGGLPAMGELQWTDVKQHLERHIFEQ-------------ASGEQGQDNKAHL---------IDSAADVESAGSYGREWELAQGELCRLVEYRCPLDMLDCVKACVKLVALSVEASLVKRQRELDPSSRSGGLKPVACGADDILPALTWVVVQ-----------------------GLEKHKATQ--NLIKAAREGDSCIGVAISEEGNCVGRRFAAATSNPSCPQNMNGSESVSYWLGAGADPNGLSSDQQSTVLTAAITHRRRGVIKILLEGAWSKMVDPNRQICPNYGVDRGRSALMVAAAMGDMATVLSLLRIPGIDRRLAC-ANGKDAVDYAVQQGEKKRDLKEKAAAGGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNQTSDYTGQYTPIIAAAFLGHIEVLESLLESPLCDPNLPNARGETALMYCSQREGYATGDTQVK--IFLLARGRD 1570          
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A7S3NHB6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHB6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.680e-30
Identity = 150/540 (27.78%), Postives = 220/540 (40.74%), Query Frame = 0
Query:    1 QSPAGALWSLVRWLEQELPDVGIFSNSH-----RAGGGLPVMGDLQ-------WKDVCQHLERFIFEQVFDQCLQAAPDY-GAGDAEVTERLASLRFLK------------------------PRHWCVDFLDDGGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKKKVISVGADDLLAALTW--VAANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFARSA--DASVLAD-VTQAQFDAGLARYAKTQAAIRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPAT----------------------------ELNVRVCP-----NYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTAIDADGLNAVDYAKSAAVASVLLA-DPAKVTLCQAAKAGNLQY--------VEALLLQSQDSNATDATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARG----ETALMYSV 452
            + P    WS V +  + L D G+          R+ GG+              W DV +H+E+ I  ++F+  +QA+P+    GD  ++  LA LRFL+                         +   +   ++       G EW +AQ EL  + + R P + +D + + VR +A +VEA   R    +A N+        +GAD+LL A+TW  + ANPPRLAS LW++  Y RD       E  Y    L++A+ FAR    D   L   +++  FD G+     TQ A+ AA   D   +  LL   AD +G S DQ  T L AA+  +    V   L + A+                            + ++R        N G R+G TALM+AA  G+   V  LL       R  +DA G +A   A+ A       A D    T         L Y           LLL+  D N T       P+V+A   G++A +  LL  P  DV+     G    +TALM  V
Sbjct:  520 KKPGSMFWSAVDFAVRFLKDKGLLGGPRTIPPGRSRGGIASGSSRTEEKEASFWADVRRHIEKKIMARIFEAIMQASPEARNKGDEALSLHLARLRFLRLADLGVVTKIRSSSKNDEATPIDDAKEEQIPMQEERNTPVEEGAEWVVAQYELFEVAQSRTPSEALDRLASSVRFIASAVEACSNRGRPLAAYNA--------IGADELLPAITWTVIQANPPRLASMLWFIDEYARDDMLRA--EYGYAYANLSAAVNFARETLVDVKPLEGLISKDDFDKGVKTAHLTQKAVDAALKKDARQLRLLLAAGADVSGPSVDQSTTPLVAAIESKEPECVAAALAYLASXXXXXXXXXXXXXXXXXXRVAAATNNQSQAHIRSSQVDAPINRGSRQGMTALMVAAALGETDAVCGLLALGADPER--VDARGRSAGHLARDAGYLDCAEALDCGSPTDPDFPDTNPLVYRALADVATTRGLLLRGADVNKTCGLLGCPPIVAAAAAGDVATLSALLSVPEVDVDACATSGPFAGQTALMRCV 1047          
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Match: A0A7S2FWS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWS3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.320e-20
Identity = 114/381 (29.92%), Postives = 169/381 (44.36%), Query Frame = 0
Query:   73 AEVTERLASLRFLKPRHWCVDFLDDGGGGGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRHSESAGNSAKKKKVISVGADDLLAALTW--VAANPPRLASRLWYMCYYMRDAASGGGGEGAYCLTQLASALQFAR-----------SADASVLADVTQAQFDAGLARYA-----------------------KTQAAIRAASFGDREGVEKLL--FEDA----DPNGLSADQQHTVLTAAVAGRHVPVVKTVLQHPATELNV--RVCPNYGRRRGRTALMLAAEGG---DITVVLALLGRAGSEGRTAIDADGLNAVDYAKSAA---VASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQDSN 403
            A + ERLA+LRF+      + F          G EW  AQ  L R+ E      M++ +    R++     A+ Q+   +S G      K  SV ADDL+ A+ W  + ANPP LASRLW++ ++         GE  + +  L +A++F+            +AD  V+  +     D G+ R +                       +TQ  I A    D   + +L   F D     DPN L  DQ+ T+L+AAV  + +  +K+VL    T + V  R+ P  G    RTALM+AA         +VL LL  AG+E R   D +GL+A D A++ +   V  +L ADP  + L  A KA ++     LL Q    N
Sbjct:   17 AGLPERLAALRFISLSRLGLSFAVPKDRD--MGDEWIFAQTLLSRMCEAESVWGMLEILTDAFRVIT----AATQKLQMKSCG------KRESVTADDLMPAIIWTVIQANPPNLASRLWFLDHFTEPNLFIRTGEAGFMIANLVAAVEFSLHLDPSSLTALDTADGGVVLPLKGGNDDDGVVRVSGDDEAMDSYLDSLSFEDAIKLNQRTQECIAAVETRDVNHLRRLCENFPDGTARIDPNALRVDQKETLLSAAVRSQSLSKLKSVLTTCGTRIRVDTRISPCRGPPSRRTALMIAAASPGPQSKDMVLELLS-AGAE-RLLRDGEGLSADDLARAISNTEVLEILRADPRHLNLLDAIKAQDMSLARGLLAQGARVN 383          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7115.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJN4_ECTSI2.160e-17562.58VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YQM7_9STRA5.870e-14246.66VPS9 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5KV84_9PHAE9.660e-9845.62VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3NHB6_9STRA9.680e-3027.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2FWS3_9STRA2.320e-2029.92Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 409..439
e-value: 41.0
score: 13.1
coord: 319..353
e-value: 3.0
score: 16.8
coord: 443..477
e-value: 3900.0
score: 0.6
coord: 245..274
e-value: 3900.0
score: 0.6
coord: 279..309
e-value: 20.0
score: 14.1
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 380..457
e-value: 3.4E-7
score: 30.8
coord: 252..341
e-value: 4.4E-9
score: 36.8
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80VPS9 domaincoord: 69..245
e-value: 5.6E-23
score: 83.6
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 38..227
IPR003123VPS9 domainPFAMPF02204VPS9coord: 108..224
e-value: 1.8E-12
score: 47.4
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 69..230
score: 16.858967
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 373..477
e-value: 2.1E-16
score: 61.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 246..372
e-value: 1.1E-15
score: 59.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 247..454
IPR045046Vacuolar protein sorting-associated protein 9-likePANTHERPTHR23101RAB GDP/GTP EXCHANGE FACTORcoord: 41..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7115contigP-wetherbeei_contig7115:44..3079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7115.1.1mRNA_P-wetherbeei_contig7115.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7115 44..3079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7115.1.1 ID=prot_P-wetherbeei_contig7115.1.1|Name=mRNA_P-wetherbeei_contig7115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=478bp
QSPAGALWSLVRWLEQELPDVGIFSNSHRAGGGLPVMGDLQWKDVCQHLE
RFIFEQVFDQCLQAAPDYGAGDAEVTERLASLRFLKPRHWCVDFLDDGGG
GGAAGREWELAQRELCRIIECRCPMDMVDCVKACVRLVALSVEASLQRRH
SESAGNSAKKKKVISVGADDLLAALTWVAANPPRLASRLWYMCYYMRDAA
SGGGGEGAYCLTQLASALQFARSADASVLADVTQAQFDAGLARYAKTQAA
IRAASFGDREGVEKLLFEDADPNGLSADQQHTVLTAAVAGRHVPVVKTVL
QHPATELNVRVCPNYGRRRGRTALMLAAEGGDITVVLALLGRAGSEGRTA
IDADGLNAVDYAKSAAVASVLLADPAKVTLCQAAKAGNLQYVEALLLQSQ
DSNATDATGQFTPLVSATLLGNLAVMETLLRHPNCDVNKRNARGETALMY
SVQREGHATPDSQVAAAVMLLAHGADR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR037191VPS9_dom_sf
IPR003123VPS9
IPR036770Ankyrin_rpt-contain_sf
IPR045046Vps9-like