mRNA_P-wetherbeei_contig7113.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7113.3.1
Unique NamemRNA_P-wetherbeei_contig7113.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A2J5HDH3_9EURO (Ubiquitin-protein ligase n=2 Tax=Aspergillus TaxID=5052 RepID=A0A2J5HDH3_9EURO)

HSP 1 Score: 89.7 bits (221), Expect = 2.700e-20
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L   S   +W+ Y++GP GS +  G FLV L LP  YP  PPA  F T+++HPN+  D  G +   ++ P  W   + +A VLQ  R LL  P  D  A       +Y +DR R++  A  WTR++A
Sbjct:   23 VELADESDLYLWNVYMEGPEGSPFQNGKFLVKLKLPTEYPFKPPAVSFGTKIYHPNVTNDDKGSMCLGMLRPDEWKPSSKIAAVLQFARQLLVEPMPD-DAVEGRIAEQYKNDRARYDELAKEWTRKYA 150          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A1CL30_ASPCL (Ubiquitin conjugating enzyme (UbcB), putative n=1 Tax=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) TaxID=344612 RepID=A1CL30_ASPCL)

HSP 1 Score: 89.4 bits (220), Expect = 4.220e-20
Identity = 51/129 (39.53%), Postives = 66/129 (51.16%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V L   S    W  Y++GP GS Y  G FLV L LP  YP  PP   F T+++HPN+  D  G +   ++ P  W   + +A VLQ  R LL  P  D  A       +Y +DR R+E  A  WTR+FA
Sbjct:   24 VQLADESNLYEWKVYMEGPEGSPYHNGKFLVKLTLPTEYPFKPPTVSFATKIYHPNVTNDDKGSMCLGMLRPDEWKPSSRIAAVLQFARQLLDEPMPD-DAVEGRIAEQYKNDRPRYEEIAREWTRKFA 151          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A507QRA9_MONPU (UBC core domain-containing protein n=1 Tax=Monascus purpureus TaxID=5098 RepID=A0A507QRA9_MONPU)

HSP 1 Score: 88.6 bits (218), Expect = 7.810e-20
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L   S    W+ Y++GP GS + KG FLV L LP  YP  PP   F T+++HPN+  D  G +   ++    W   + L+ VLQ  R LL  P  D  A  A    +Y++DR R+E  A  WTR++A
Sbjct:   24 VELADESNLYDWNVYMEGPEGSPFYKGTFLVKLHLPIEYPFKPPVVSFATRIYHPNVTNDDKGSMCLGMLKSDEWKPSSRLSAVLQFARQLLEEPMPD-DAVEARIAEQYNNDRKRYEEIARDWTRKYA 151          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A3M2T4C3_9EURO (Ubiquitin conjugating enzyme n=1 Tax=Aspergillus sp. HF37 TaxID=1960876 RepID=A0A3M2T4C3_9EURO)

HSP 1 Score: 88.6 bits (218), Expect = 8.210e-20
Identity = 51/129 (39.53%), Postives = 68/129 (52.71%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V L   S    W  Y++GP GS Y KG FLV L LP +YP  PP   F T+++HPNI+ D  G +   ++ P  W   + +A VLQ  R LLA P  D  A       +Y +D  R++  A  WTR +A
Sbjct:   24 VQLADESNLYSWKVYMEGPEGSPYHKGTFLVNLTLPTSYPFKPPTVSFGTKIYHPNISNDDKGSMCLGMLRPDEWKPSSKIAAVLQFARQLLAEPMPD-DAIEGRIAEQYRADPKRYDEVAKEWTRNYA 151          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A4S3JJ27_9EURO (UBC core domain-containing protein n=1 Tax=Aspergillus tanneri TaxID=1220188 RepID=A0A4S3JJ27_9EURO)

HSP 1 Score: 87.8 bits (216), Expect = 1.560e-19
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L+  S    W  Y+ GP GS Y KG FLV L LP  YP  PPA  F T+++HPN+  D  G +   ++    W   + +A VL+  R LLA P  D  A       +Y +D+ R++  A  WTR++A
Sbjct:   24 VELVEESNLYEWRVYMDGPEGSPYYKGRFLVRLSLPTEYPFKPPALSFGTKIYHPNVTNDEKGSMCLGMLKSDEWKPSSRIAAVLEFARQLLAEPMPD-DAVEGRIAEQYKNDQKRYDEVAREWTRKYA 151          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: UPI001E8E5506 (uncharacterized protein n=1 Tax=Aspergillus melleus TaxID=138277 RepID=UPI001E8E5506)

HSP 1 Score: 87.0 bits (214), Expect = 3.120e-19
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L+  S    W  Y++GP GS Y KG FL+ L LP  YP  PPA  F T+++HPN+  D  G +   ++    W   + +A VL+  R LLA P  D  A       +Y +DR R++  A  WTR++A
Sbjct:   24 VELVDESNIYEWKVYMEGPEGSPYHKGRFLMKLSLPTEYPFKPPAVSFGTKIYHPNVTNDEKGSMCLGMLKSDEWKPSSRIAAVLEFARQLLAEPMPD-DAVEGRIAEQYKNDRARYDEIARDWTRKYA 151          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A1L9RX53_ASPWE (UBC core domain-containing protein n=1 Tax=Aspergillus wentii DTO 134E9 TaxID=1073089 RepID=A0A1L9RX53_ASPWE)

HSP 1 Score: 86.3 bits (212), Expect = 6.700e-19
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L+  S    W  Y++GP GS Y +G+FLV L LP  YP  PP   F T+++HPN+  D  G +   ++ P  W   + ++ VL+  R LL  P  D  A       +Y +D  R+E  A  WTR +A
Sbjct:   24 VELVDESNLYDWKVYMEGPEGSPYHQGIFLVKLKLPTEYPFKPPTVSFGTKIYHPNVTNDEKGSMCLGMLKPDEWKPSSRISAVLEFARQLLKEPMPD-DAVEGRIAEQYKNDNARYEEIARDWTRRYA 151          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A2I2FCX5_9EURO (Signal peptidase complex catalytic subunit SEC11 n=1 Tax=Aspergillus candidus TaxID=41067 RepID=A0A2I2FCX5_9EURO)

HSP 1 Score: 89.0 bits (219), Expect = 1.320e-18
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L   S    W+ Y++GP GS++  G FLV L LP  YP  PPA  F T+++HPN+  D  G +   ++ P  W   + +A VLQ  R LL  P  D  A       +Y +DR R++  A  WTR++A
Sbjct:  194 VELADESDLYQWNVYMEGPEGSSFQNGNFLVKLKLPTEYPFKPPAVSFGTKIYHPNVTNDDKGSMCLGMLRPDEWKPSSKIAAVLQFARQLLVEPMPD-DAVEGRIAEQYKNDRARYDELAKEWTRKYA 321          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A5N5XE25_9EURO (Signal peptidase complex catalytic subunit SEC11 n=12 Tax=Aspergillus TaxID=5052 RepID=A0A5N5XE25_9EURO)

HSP 1 Score: 87.4 bits (215), Expect = 4.820e-18
Identity = 49/129 (37.98%), Postives = 68/129 (52.71%), Query Frame = 1
Query:    1 VDLMRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            V+L   S    W  Y++GP GS Y  G FLV L LP  YP  PP+  F T+++HPN+  D  G +   ++ P  W   + +A VLQ  R LL  P  D  A       +Y +DR R++  A  WTR++A
Sbjct:  191 VELANESDFYQWKVYMEGPEGSPYHNGRFLVKLSLPTEYPFKPPSVSFGTKIYHPNVTNDDKGSMCLGMLRPDEWKPSSKIAGVLQFARQLLLEPMPD-DAVEGRIADQYKNDRARYDELAKEWTRKYA 318          
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Match: A0A1L9SAU3_9EURO (Signal peptidase complex catalytic subunit SEC11 n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9SAU3_9EURO)

HSP 1 Score: 86.7 bits (213), Expect = 1.020e-17
Identity = 47/118 (39.83%), Postives = 64/118 (54.24%), Query Frame = 1
Query:   34 WHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVFHPNIAID--GRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAEARAEYDSDRWRFEARAHAWTREFA 381
            W  Y++GP GS Y  G FLV L LP  YP  PP   FVT+++HPN+  D  G +   ++    W   + +A VL+  R LLA P  D  A       +Y +DR R+E  A  WTR++A
Sbjct:  208 WKVYMEGPEGSPYHNGKFLVKLSLPTGYPFKPPTINFVTKIYHPNVTNDDKGSMCLGMLKSDEWKPSSRIAAVLEFARQLLAEPMPD-DAVETRIAEQYKNDRTRYEEIARDWTRKYA 324          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7113.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2J5HDH3_9EURO2.700e-2037.98Ubiquitin-protein ligase n=2 Tax=Aspergillus TaxID... [more]
A1CL30_ASPCL4.220e-2039.53Ubiquitin conjugating enzyme (UbcB), putative n=1 ... [more]
A0A507QRA9_MONPU7.810e-2038.76UBC core domain-containing protein n=1 Tax=Monascu... [more]
A0A3M2T4C3_9EURO8.210e-2039.53Ubiquitin conjugating enzyme n=1 Tax=Aspergillus s... [more]
A0A4S3JJ27_9EURO1.560e-1937.98UBC core domain-containing protein n=1 Tax=Aspergi... [more]
UPI001E8E55063.120e-1937.98uncharacterized protein n=1 Tax=Aspergillus melleu... [more]
A0A1L9RX53_ASPWE6.700e-1936.43UBC core domain-containing protein n=1 Tax=Aspergi... [more]
A0A2I2FCX5_9EURO1.320e-1837.98Signal peptidase complex catalytic subunit SEC11 n... [more]
A0A5N5XE25_9EURO4.820e-1837.98Signal peptidase complex catalytic subunit SEC11 n... [more]
A0A1L9SAU3_9EURO1.020e-1739.83Signal peptidase complex catalytic subunit SEC11 n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7113contigP-wetherbeei_contig7113:2164..2544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog5057.CADACLAP00003625
PFAMsUQ_con
Model size381
Max annot lvl4751|Fungi
KEGG koko:K13280
KEGG Pathwayko03060,map03060
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004842,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0061631,GO:0061650,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons1
Evalue1.24e-20
EggNOG OGsCOG5078@1|root,KOG0417@2759|Eukaryota,3A3MF@33154|Opisthokonta,3P3WQ@4751|Fungi,3QWB6@4890|Ascomycota,20GR8@147545|Eurotiomycetes,3SF76@5042|Eurotiales
EC3.4.21.89
DescriptionBelongs to the ubiquitin-conjugating enzyme family
Cds size372
COG categoryO
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186959.2679768-UTR-P-wetherbeei_contig7113:2163..21721683186959.2679768-UTR-P-wetherbeei_contig7113:2163..2172Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7113 2164..2172 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186959.2815042-CDS-P-wetherbeei_contig7113:2172..25441683186959.2815042-CDS-P-wetherbeei_contig7113:2172..2544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7113 2173..2544 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7113.3.1prot_P-wetherbeei_contig7113.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7113 2173..2544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7113.3.1

>prot_P-wetherbeei_contig7113.3.1 ID=prot_P-wetherbeei_contig7113.3.1|Name=mRNA_P-wetherbeei_contig7113.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
MRSSFQQVWHAYIQGPSGSAYTKGVFLVTLLLPDNYPQAPPACCFVTQVF
HPNIAIDGRVAFPLIDPMHWTEDTCLADVLQQLRALLAFPELDIPAANAE
ARAEYDSDRWRFEARAHAWTREFA
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mRNA from alignment at P-wetherbeei_contig7113:2164..2544+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7113.3.1 ID=mRNA_P-wetherbeei_contig7113.3.1|Name=mRNA_P-wetherbeei_contig7113.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig7113:2164..2544+ (Phaeothamnion wetherbeei SAG_119_79)
GTTGATCTGATGCGTTCGTCCTTCCAACAGGTCTGGCACGCGTACATTCA GGGCCCCAGCGGCTCGGCGTACACGAAAGGGGTATTCCTCGTCACCCTGC TGCTCCCGGACAACTACCCGCAGGCGCCGCCCGCGTGCTGTTTCGTCACG CAGGTGTTCCACCCCAACATCGCCATCGACGGCCGCGTCGCCTTCCCACT CATCGACCCGATGCACTGGACCGAGGACACGTGCCTTGCCGACGTGTTGC AGCAGCTGCGCGCGCTACTGGCGTTCCCAGAGCTCGACATCCCCGCAGCG AACGCCGAGGCACGCGCGGAATACGATTCGGACCGCTGGCGCTTCGAGGC GCGCGCGCATGCCTGGACTCGCGAGTTCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7113:2164..2544+

>mRNA_P-wetherbeei_contig7113.3.1 ID=mRNA_P-wetherbeei_contig7113.3.1|Name=mRNA_P-wetherbeei_contig7113.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig7113:2164..2544+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGTTCGTCCTTCCAACAGGTCTGGCACGCGTACATTCAGGGCCCCAG
CGGCTCGGCGTACACGAAAGGGGTATTCCTCGTCACCCTGCTGCTCCCGG
ACAACTACCCGCAGGCGCCGCCCGCGTGCTGTTTCGTCACGCAGGTGTTC
CACCCCAACATCGCCATCGACGGCCGCGTCGCCTTCCCACTCATCGACCC
GATGCACTGGACCGAGGACACGTGCCTTGCCGACGTGTTGCAGCAGCTGC
GCGCGCTACTGGCGTTCCCAGAGCTCGACATCCCCGCAGCGAACGCCGAG
GCACGCGCGGAATACGATTCGGACCGCTGGCGCTTCGAGGCGCGCGCGCA
TGCCTGGACTCGCGAGTTCGCC
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