mRNA_P-wetherbeei_contig711.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig711.5.1
Unique NamemRNA_P-wetherbeei_contig711.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A835ZG75_9STRA (AMPKBI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG75_9STRA)

HSP 1 Score: 380 bits (977), Expect = 3.470e-126
Identity = 205/275 (74.55%), Postives = 221/275 (80.36%), Query Frame = 2 
Query:  284 MGNSASGKEGPEGLDGRA-DGYAGYAEGRAAPGVP-EFRDNVFAPGVGGMPD----SMHLMDVGSGGGGASPPD--DMDVEPKDGSGEEEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            MGN A GKEG + LDGR  DG+  Y+  R APG P  F    FA  +  M D    +  +MDVG    G    D  DMDVE KD   E+EE VVPTVFRWEHGGRQVYITGTFNNWE+QIPMHRSGNDFTYIH+LKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVS+F AYTGED+   ARG+A+ +E Y QFTPD+DEYTKEPPPLPPHLRHIILNKN P+NDPTALP PQHVALNHLYCTAIKDGMMVLGMTQRYKQK VTTVYYS
Sbjct:    1 MGNGA-GKEGGD-LDGRGVDGFGSYSGTRTAPGAPGAFSRASFATPL--MEDEHGYNYKMMDVG----GLERQDSGDMDVEGKD---EDEEAVVPTVFRWEHGGRQVYITGTFNNWEKQIPMHRSGNDFTYIHDLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSDFVAYTGEDELEQARGKADGDELYNQFTPDLDEYTKEPPPLPPHLRHIILNKNPPSNDPTALPPPQHVALNHLYCTAIKDGMMVLGMTQRYKQKCVTTVYYS 264
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A836CBZ2_9STRA (AMPKBI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ2_9STRA)

HSP 1 Score: 378 bits (970), Expect = 2.770e-125
Identity = 198/273 (72.53%), Postives = 213/273 (78.02%), Query Frame = 2 
Query:  284 MGNSASGKEGPEGLDGRADGYAGYAEGRAAPGVPE-FRDNVFAPGVGGMPDSMHLMDVG-----SGGGGASPPDDMDVEPKDGSGEEEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            MGN +    G EG D R DG   Y+  R APG P  F D+   P    + D   L  VG     S G       +MDVE   G  EEE+ VVPTVFRWEHGGRQVYITGTFNNWE+QIPMHRSGNDFTYIH+LK+GKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTG+DDF  AR + E ++ Y QFTPD+DEYTKEPPPLPPHLRHIILNKN P+NDPTALP PQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS
Sbjct:    1 MGNGS----GKEGGDLRGDGLGTYSGTRTAPGAPGGFSDSFATP----LDDDYKLDSVGLDRLDSAG-------EMDVE--GGQQEEEDNVVPTVFRWEHGGRQVYITGTFNNWEKQIPMHRSGNDFTYIHDLKRGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGDDDFEQARNKPEGDDLYSQFTPDLDEYTKEPPPLPPHLRHIILNKNPPSNDPTALPPPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 256
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: D8LDA2_ECTSI (AMPKBI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDA2_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 4.400e-125
Identity = 201/279 (72.04%), Postives = 217/279 (77.78%), Query Frame = 2 
Query:  284 MGNSA--SGKEGPEGLDGRADGYAGYAEGRAAPGVPE-FRDNVFAPGVGGMPDSMHLM------DVGSGGGGASPPDD-MDVEPKDGSGEEEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAAR-GRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYST 1087
            MGNS   S K+G  G D    G++ Y + R A G P  F D  FAP V       HL       D  +  G   PP D MDVE K   GEEEEE+VPTVFRWEHGGRQVYITGTFNNWE+QIPMHRSGNDFTYIH LKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVS+F  YTGE++F A R  + EA ++Y Q TPD+DEYTKEPPPLPPHLRHIILNKN PANDP+ALPVPQHVALNHLYCTAIKDGMMVLGMT+RYKQKFVTTVYYST
Sbjct:    1 MGNSQFNSSKDGEGGPDREGGGFSDYQQTRTAAGAPGGFSDATFAPPVPMGDGRRHLYGGVASRDGTARPGAEGPPGDAMDVEAKADEGEEEEELVPTVFRWEHGGRQVYITGTFNNWEKQIPMHRSGNDFTYIHTLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSDFVGYTGEENFEANRLKQLEANDKYSQCTPDLDEYTKEPPPLPPHLRHIILNKNPPANDPSALPVPQHVALNHLYCTAIKDGMMVLGMTERYKQKFVTTVYYST 279
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A7S2AZ02_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZ02_9STRA)

HSP 1 Score: 332 bits (850), Expect = 4.100e-107
Identity = 174/273 (63.74%), Postives = 200/273 (73.26%), Query Frame = 2 
Query:  284 MGNSASGKEGPEGLDGRADG-YAGYAEGRAAPGVP---EFRDN-VFAPGVGGMPDSMHLMDVGSGGGGASPPDDMDVEPKDGSGEEEEEVVPTVFRWEHGG-RQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            MGN  +GKEG +G DG     Y   A  R  PG P    F+DN       GG  D M L+  G        P+    +          +VVPTVFRW+HGG RQVYITGTFNNWE+QIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQ T+ADIEGR+NNFIDVSEF+AYTGEDDF   +   + E+ + Q  P+++EYTKEPPPLPPHLRHIILNK +P ND TAL +PQHVALNHLYCTAIKDGMMVLG+TQR+++KFVTT+YYS
Sbjct:    7 MGNF-TGKEGVDGKDGEQQAIYNADANNRTEPGRPGAFPFQDNPTMETHTGGKSDHMDLVSAGQ-----QLPEPYIAD---------NDVVPTVFRWDHGGGRQVYITGTFNNWEKQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQQTIADIEGRINNFIDVSEFKAYTGEDDFMDPKALPDPEDSWSQVRPELEEYTKEPPPLPPHLRHIILNKVSPINDSTALSIPQHVALNHLYCTAIKDGMMVLGITQRFREKFVTTIYYS 264
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A7S2BL33_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL33_9STRA)

HSP 1 Score: 321 bits (822), Expect = 4.330e-103
Identity = 173/270 (64.07%), Postives = 195/270 (72.22%), Query Frame = 2 
Query:  284 MGNSASGKEGPEGLDGRADGYAGYAEG-RAAPGVPEFRDNVFAPGVGGMPDSMHLMDVGSGGGGASPPDDMDVEPKDGSGEEEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFE-AYTGEDDFAAARGRAEAEEQ-YGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            MGN  +GKEG EG      G  G  +G R  PG P           GG        D  +GG      D MDV+ +      EEE+VPTVFRWEHGGRQVYITGTFNNWE+QI MHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGR+NNFIDVS+F+ AYTG+DDF         + + + Q  P+++EYTKEPPPLPPHLRHIILNK  P ND  AL +PQHVALNHLYCTAIKDGMMVLG+TQRY++KFVT +YYS
Sbjct:    1 MGNF-TGKEGVEGDQKAQPGNYGIDQGSRTEPGRP-----------GGFQFEYQRPDESAGG------DGMDVDAQRFDDAAEEELVPTVFRWEHGGRQVYITGTFNNWEKQIQMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFQQAYTGDDDFLNPHKEPVVQNEIFTQVRPELEEYTKEPPPLPPHLRHIILNKVPPVNDAAALSIPQHVALNHLYCTAIKDGMMVLGITQRYREKFVTCIYYS 252
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A7S4A5H3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5H3_9STRA)

HSP 1 Score: 320 bits (819), Expect = 1.610e-102
Identity = 150/201 (74.63%), Postives = 174/201 (86.57%), Query Frame = 2 
Query:  491 MDVEPKDGSGEEEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRA-EAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYSTT 1090
            MDV+    S  ++EE VPTVFRWEHGGRQV++TGTFN+W  QIPMHRSGNDFTYIHNLKKGKHAFKF+VDDEWRFAPDQPTVADIEGR+NNFIDV++F+AYTG+++F   RG   + +E+Y +  PD+DEYTK+PPPLPPHLRHIILNK  P+ DP ALPVPQHVALNHLYCTAIKDGMMVLG+T RY+QK  TTVYYS +
Sbjct:   64 MDVDQS--STNDDEEEVPTVFRWEHGGRQVFVTGTFNDWTAQIPMHRSGNDFTYIHNLKKGKHAFKFVVDDEWRFAPDQPTVADIEGRINNFIDVTDFDAYTGDENFLERRGAVKDDDEKYTREIPDLDEYTKDPPPLPPHLRHIILNKAPPSGDPNALPVPQHVALNHLYCTAIKDGMMVLGVTLRYRQKACTTVYYSVS 262
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A7S2WI24_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI24_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.280e-101
Identity = 143/185 (77.30%), Postives = 165/185 (89.19%), Query Frame = 2 
Query:  530 EEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            +++VPTVFRW+HGGRQV+ITGTFNNWE+QIPMHRSGNDFTYIHNLKKGKHA+KFIVDDEWRFAPDQPTVADIEGR+NNFIDVS+F AYTG+D++ A  G +  +E + Q  P++DEYTKEPP LPPHLRHIILNK    +D  ALP PQHVALNHLYCTAIKDGMMVLG TQRY++KFVT++YYS
Sbjct:   56 QDLVPTVFRWDHGGRQVFITGTFNNWEKQIPMHRSGNDFTYIHNLKKGKHAYKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFVAYTGDDNYLATSGISTQDEVFSQVRPELDEYTKEPPQLPPHLRHIILNKVPSVSDTAALPTPQHVALNHLYCTAIKDGMMVLGATQRYREKFVTSIYYS 240
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A8J2WVW3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVW3_9STRA)

HSP 1 Score: 319 bits (818), Expect = 3.150e-100
Identity = 150/199 (75.38%), Postives = 173/199 (86.93%), Query Frame = 2 
Query:  491 MDVEPKDGSGEEEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRA-EAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            MDV+    S  ++EE VPTVFRWEHGGRQV++TGTFN+W  QIPMHRSGNDFTYIHNLKKGKHAFKF+VDDEWRFAPDQPTVADIEGR+NNFIDV++F+AYTG+++F   RG   + +E+Y +  PD+DEYTK+PPPLPPHLRHIILNK  P+ DP ALPVPQHVALNHLYCTAIKDGMMVLG+T RY+QK  TTVYYS
Sbjct:   64 MDVDQS--STNDDEEEVPTVFRWEHGGRQVFVTGTFNDWTAQIPMHRSGNDFTYIHNLKKGKHAFKFVVDDEWRFAPDQPTVADIEGRINNFIDVTDFDAYTGDENFLERRGAVKDDDEKYTREIPDLDEYTKDPPPLPPHLRHIILNKAPPSGDPNALPVPQHVALNHLYCTAIKDGMMVLGVTLRYRQKACTTVYYS 260
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: A0A7S2LHN5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LHN5_9STRA)

HSP 1 Score: 315 bits (806), Expect = 1.190e-99
Identity = 149/189 (78.84%), Postives = 162/189 (85.71%), Query Frame = 2 
Query:  524 EEEEVVPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFA--AARGRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            E+++ VPTVFRWEHGGRQVY+TGTFN W +QIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGR+NNFIDVS+F+AYTG+ DF   A  G  E   ++    PD+DEYTKEPPPLPPHLRHIILNK     D  ALPVPQHVALNHLYCTAIKD MMVLG+TQRYK KFVTTVYYS
Sbjct:  133 EDDDTVPTVFRWEHGGRQVYVTGTFNGWSKQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRINNFIDVSDFKAYTGDRDFEEKANSGVVEDVGEFSHSMPDLDEYTKEPPPLPPHLRHIILNKPPQLADTAALPVPQHVALNHLYCTAIKDNMMVLGITQRYKTKFVTTVYYS 321
[Close]
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Match: F0YG62_AURAN (AMPKBI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG62_AURAN)

HSP 1 Score: 321 bits (823), Expect = 1.140e-97
Identity = 146/182 (80.22%), Postives = 164/182 (90.11%), Query Frame = 2 
Query:  539 VPTVFRWEHGGRQVYITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPTVADIEGRVNNFIDVSEFEAYTGEDDFAAARGRAEAEEQYGQFTPDIDEYTKEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVLGMTQRYKQKFVTTVYYS 1084
            VPTVFRWEHGGR VY+TGTFNNW++QIPMHRSGNDFTYIHNLKKGKHAFKF+VDDEWRFAPDQPTVADIEGR+NNFIDVS+F+AYTG+++F   R ++   E Y +  PD+DEYTK+PPPLPPHLRHIILNK  P+NDP ALPVPQHVALNHLYCTAIKDGMMVLG+T RY+QK  TTVYYS
Sbjct:  500 VPTVFRWEHGGRVVYVTGTFNNWDKQIPMHRSGNDFTYIHNLKKGKHAFKFVVDDEWRFAPDQPTVADIEGRINNFIDVSDFDAYTGDENFLLRRTKSVGGELYTREIPDLDEYTKDPPPLPPHLRHIILNKAPPSNDPNALPVPQHVALNHLYCTAIKDGMMVLGVTLRYRQKACTTVYYS 681
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig711.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG75_9STRA3.470e-12674.55AMPKBI domain-containing protein n=1 Tax=Tribonema... [more]
A0A836CBZ2_9STRA2.770e-12572.53AMPKBI domain-containing protein n=1 Tax=Tribonema... [more]
D8LDA2_ECTSI4.400e-12572.04AMPKBI domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2AZ02_9STRA4.100e-10763.74Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BL33_9STRA4.330e-10364.07Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A5H3_9STRA1.610e-10274.63Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2WI24_9STRA1.280e-10177.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2WVW3_9STRA3.150e-10075.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2LHN5_9STRA1.190e-9978.84Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0YG62_AURAN1.140e-9780.22AMPKBI domain-containing protein n=1 Tax=Aureococc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig711contigP-wetherbeei_contig711:5578..7345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDA2
Preferred namePRKAB2
PFAMsAMPK1_CBM,AMPKBI
Model size1768
Max annot lvl2759|Eukaryota
KEGG rclassRC00005
KEGG koko:K00703,ko:K07199
KEGG ReactionR02421
KEGG Pathwayko00500,ko01100,ko01110,ko02026,ko04068,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,map00500,map01100,map01110,map02026,map04068,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410
KEGG ModuleM00565
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004679,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0005952,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0007049,GO:0007050,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009889,GO:0009893,GO:0009987,GO:0010468,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016043,GO:0016236,GO:0016301,GO:0016310,GO:0016324,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022607,GO:0023052,GO:0030011,GO:0031323,GO:0031326,GO:0031588,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0035088,GO:0035090,GO:0035878,GO:0036211,GO:0042304,GO:0042592,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045177,GO:0045786,GO:0046890,GO:0048518,GO:0048519,GO:0048523,GO:0048736,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051259,GO:0051291,GO:0051716,GO:0051726,GO:0060173,GO:0060249,GO:0060255,GO:0061245,GO:0061695,GO:0061919,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0098590,GO:0140096,GO:1901564,GO:1902494,GO:1902911,GO:1990234
Exons1
Evalue1.05e-130
EggNOG OGsKOG1616@1|root,KOG1616@2759|Eukaryota
Ec32 ortholog descriptionAssociation with the SNF1 complex (ASC) domain
Ec32 orthologEc-25_001970.1
EC2.4.1.21
Descriptionamylopectin binding
Cds size813
COG categoryS
CAZyGT5
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186959.023142-UTR-P-wetherbeei_contig711:5577..58601683186959.023142-UTR-P-wetherbeei_contig711:5577..5860Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig711 5578..5860 +
1683186959.046719-UTR-P-wetherbeei_contig711:6673..73451683186959.046719-UTR-P-wetherbeei_contig711:6673..7345Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig711 6674..7345 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186959.0367298-CDS-P-wetherbeei_contig711:5860..66731683186959.0367298-CDS-P-wetherbeei_contig711:5860..6673Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig711 5861..6673 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig711.5.1prot_P-wetherbeei_contig711.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig711 5861..6673 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig711.5.1

>prot_P-wetherbeei_contig711.5.1 ID=prot_P-wetherbeei_contig711.5.1|Name=mRNA_P-wetherbeei_contig711.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
MGNSASGKEGPEGLDGRADGYAGYAEGRAAPGVPEFRDNVFAPGVGGMPD
SMHLMDVGSGGGGASPPDDMDVEPKDGSGEEEEEVVPTVFRWEHGGRQVY
ITGTFNNWERQIPMHRSGNDFTYIHNLKKGKHAFKFIVDDEWRFAPDQPT
VADIEGRVNNFIDVSEFEAYTGEDDFAAARGRAEAEEQYGQFTPDIDEYT
KEPPPLPPHLRHIILNKNAPANDPTALPVPQHVALNHLYCTAIKDGMMVL
GMTQRYKQKFVTTVYYSTTC*
back to top

mRNA from alignment at P-wetherbeei_contig711:5578..7345+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig711.5.1 ID=mRNA_P-wetherbeei_contig711.5.1|Name=mRNA_P-wetherbeei_contig711.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1768bp|location=Sequence derived from alignment at P-wetherbeei_contig711:5578..7345+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAGAGCATAAGAGCAAATAAAAGACAAGCTGCGAGGAAGGGGCAAGG
AAATAAGCATTCCTGCGCTCTTTTGATCCAGGCTTCAGACGGCAAACGGT
GAGGCGCGCCTTTCCAAAAGAGGCTTGCTCGAGCAGAGCGCATTTCCTCC
TTTGAGCTGCTCCCCCGTTGCGACGGGGGCCGGGCCGGCTGCGCGTGCAT
CTTTAGCAGCACGGCGCTGAGCGCCGCCGCGGCGGCAGGCACCGCCGTGG
CGGAGCGAAGACGACGGGGGCGACACCTGCAGCATGGGAAACTCAGCATC
CGGAAAGGAAGGCCCGGAAGGGCTTGACGGGCGTGCCGATGGCTACGCCG
GCTACGCCGAGGGCCGGGCGGCGCCCGGTGTGCCGGAGTTTCGCGACAAT
GTCTTCGCCCCGGGCGTCGGCGGCATGCCGGACAGCATGCACCTCATGGA
CGTCGGCAGCGGCGGCGGCGGCGCGTCCCCGCCGGACGACATGGATGTCG
AGCCGAAAGACGGCAGCGGCGAGGAGGAAGAGGAGGTCGTGCCGACCGTC
TTCCGGTGGGAGCACGGCGGCCGGCAGGTGTACATCACGGGCACTTTCAA
CAACTGGGAGCGTCAGATCCCGATGCACCGGAGCGGCAACGACTTCACGT
ATATCCACAACCTCAAGAAGGGCAAGCACGCCTTCAAGTTCATCGTCGAC
GACGAGTGGCGGTTCGCACCCGACCAGCCGACCGTCGCCGACATCGAGGG
CCGCGTCAACAACTTTATCGACGTCAGCGAGTTCGAGGCCTACACGGGGG
AGGACGACTTTGCCGCCGCGCGCGGCCGCGCCGAGGCGGAGGAGCAGTAC
GGGCAGTTCACACCGGACATCGACGAGTACACGAAGGAGCCGCCGCCGCT
GCCGCCGCACCTTCGGCACATCATCCTCAACAAGAACGCCCCGGCCAACG
ACCCGACGGCGCTGCCCGTGCCGCAGCACGTGGCACTCAACCACCTCTAC
TGCACGGCCATCAAGGATGGCATGATGGTGCTTGGCATGACACAGCGCTA
CAAGCAAAAGTTCGTCACCACCGTGTACTACAGCACGACTTGCTGACGTC
TGCGCTGGCGGCAGCCGCTGGCGGCGGCAGCCGGCGCCGGTGGCGGTGGT
GACAGCTGGCGGCGGCGCGCAGCTGGCGGCAACGGCGCGCAGCTGGCGGG
AGCGGCGGCAGCTGGCGGCGGTGCTGGCGGGAGCGGCGGCGGCTGGCCCG
GGAGCAGGATCAGTAGCGGCTGACGGCAGCGGCAACGACAGCGGTCCCGG
CATACGGGCAGCGCTCTCAACGGTGGACACAAAGCGCGGCGACGTGGACG
GGAGGGATGGCAACTGCGGTTCCGGCGGCAGCTGGCGCTCGCCGCTTCAT
CCCTGTTCTCCCAGCGCCGATGTGTGCGGCGCTTTAGCTGCGTGCTGCTT
GCGCGCGCCCGCCGGAAGGCATGATGGGGCGGCAAGCCTAGCTGCCTGAA
AGCGGCGCCAGGCTACACGCTGCCGAGAATTGGAGGCAGACGGCCAGCGG
CCGCGGCCGGAGGCATTAGCGAGTGTCGTCAGCGGGGGAGAGAGGGCCGA
TAAGCGGCCATGCGGCTGGCTGTCATTGCCTGGCTTCTTCTCCGTGTCTT
GGTTAGTAGCGGGGGCGCAGCCACCTCTGTGAAGAACCTGTCGTAGGCTT
TCGTGGCAAGCGCACAACCCTCGTAGAGAAATATACAAACACATTAACCA
ACTGACGACGATAATGGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig711:5578..7345+

>mRNA_P-wetherbeei_contig711.5.1 ID=mRNA_P-wetherbeei_contig711.5.1|Name=mRNA_P-wetherbeei_contig711.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig711:5578..7345+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAAACTCAGCATCCGGAAAGGAAGGCCCGGAAGGGCTTGACGGGCG
TGCCGATGGCTACGCCGGCTACGCCGAGGGCCGGGCGGCGCCCGGTGTGC
CGGAGTTTCGCGACAATGTCTTCGCCCCGGGCGTCGGCGGCATGCCGGAC
AGCATGCACCTCATGGACGTCGGCAGCGGCGGCGGCGGCGCGTCCCCGCC
GGACGACATGGATGTCGAGCCGAAAGACGGCAGCGGCGAGGAGGAAGAGG
AGGTCGTGCCGACCGTCTTCCGGTGGGAGCACGGCGGCCGGCAGGTGTAC
ATCACGGGCACTTTCAACAACTGGGAGCGTCAGATCCCGATGCACCGGAG
CGGCAACGACTTCACGTATATCCACAACCTCAAGAAGGGCAAGCACGCCT
TCAAGTTCATCGTCGACGACGAGTGGCGGTTCGCACCCGACCAGCCGACC
GTCGCCGACATCGAGGGCCGCGTCAACAACTTTATCGACGTCAGCGAGTT
CGAGGCCTACACGGGGGAGGACGACTTTGCCGCCGCGCGCGGCCGCGCCG
AGGCGGAGGAGCAGTACGGGCAGTTCACACCGGACATCGACGAGTACACG
AAGGAGCCGCCGCCGCTGCCGCCGCACCTTCGGCACATCATCCTCAACAA
GAACGCCCCGGCCAACGACCCGACGGCGCTGCCCGTGCCGCAGCACGTGG
CACTCAACCACCTCTACTGCACGGCCATCAAGGATGGCATGATGGTGCTT
GGCATGACACAGCGCTACAAGCAAAAGTTCGTCACCACCGTGTACTACAG
CACGACTTGCTGA
back to top