mRNA_P-wetherbeei_contig711.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI) HSP 1 Score: 304 bits (779), Expect = 3.560e-86 Identity = 217/575 (37.74%), Postives = 283/575 (49.22%), Query Frame = 1
Query: 85 GGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNADDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLPPKPLRRYVRSLLRALATGGAGPVATSAAMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGGXGVRSPAAASGFFAVRXXXXXXXXXXXXXXXRDRSGGVAAAGAGHTTQARRDMIDGCARLLFCMVKGIQGRVHSRAPQLLRVLFESLLVPKPTSIPVGEADDGGHGANGHTKRCSSSERRSDADGMTAAARGAAEEAGREWCFAVTARMMTLLCHHLRAPHSADVWMEIQFCLGTASARCKAYATAXXXXXXXSSPIITAAYGGVDVAANAVVPKTTEPTGSTAVSSASAKAAAGPAKEXXXXXXXXXXXXAATVAAERAAGVAAEFASLRRAFTLVALAVEHAGGILLRDPPVAKKQVALLAQAI 1809
G NRFKFQ K+ R +DVDV H+VR +GFLD D A P EGG FFQ EL+R ELN TPPFKRFYY+VWPLVQSLPELLH A V+ MLL +L D AGEE LQL++++ARDL++ F+P FPR L+ L+A PE+ G++ R +G+LLKFV L + +R YAPLLG++ D R AA+TLA +RRL PK +RR+ + L+ ALA G AAA G A AGA + R D +DGC++LLF KG+ GR HS+AP LLRVL +SLL PK + V + G N ++ E R WCF + + ++ LL H+R+PHSA++W+E+ + LGTA+AR +A +P PTG G +E XXXXXXXXXX A E A++RR L++ AV H GGILLR+ + KQ ALLA+A+
Sbjct: 17 GSNRFKFQGKQARAKRIDVDVAHKVRAEGFLDADKAQNPEV-EGGSFFQQELDRSKELNVTPPFKRFYYKVWPLVQSLPELLHHAPAVVDMLLALLEDPVVVTQAGEETLQLLSVLARDLQSSFFPHFPRVSTALIGLIASPDVSPEICGRVLRCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALAAGNV-------------------------------------------------EAAAGG---------------------------AEAGA---RRLRADTLDGCSQLLFFSAKGVHGRTHSQAPVLLRVLLDSLLPPKLSDANVAPGERAGEEDNLSRRK----------------------ELERGWCFELASAVLALLVEHVRSPHSAELWLELHYGLGTATARHRAS-----------------------------LPPPPAPTGDR-----------GDQEETAXXXXXXXXXXXA------------ECAAVRRTADLLSQAVGHMGGILLREEAIGVKQAALLAEAL 437
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE) HSP 1 Score: 290 bits (741), Expect = 3.610e-81 Identity = 206/608 (33.88%), Postives = 278/608 (45.72%), Query Frame = 1
Query: 85 GGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNADDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLPPKPLRRYVRSLLRALATGGAGPVATSAAMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGGXGVRSPAAASGFFAVRXXXXXXXXXXXXXXXRDRSGGVAAAGAGHTTQARRDMIDGCARLLFCMVKGIQGRVHSR---------------------------------APQLLRVLFESLLVPKPTSIPVGEADDGGHGANGHTKRCSSSERRSDADGMTAAARGAAEEAGREWCFAVTARMMTLLCHHLRAPHSADVWMEIQFCLGTASARCKAYATAXXXXXXXSSPIITAAYGGVDVAANAVVPKTTEPTGSTAVSSASAKAAAGPAKEXXXXXXXXXXXXAATVAAERAAGVAAEFASLRRAFTLVALAVEHAGGILLRDPPVAKKQVALLAQAI 1809
G NRFKFQ K+ R +DVDV H+VR +GFLD D A P EGG FFQ EL+R ELN TPPFKRFYY+VWPLVQSLPELLH A V+ MLL +L D AGEE LQL++++ARDL++ F+P FPR L+ L+A PE+ G++ R +G+LLKFV L + +R Y+PLLG++ D R AA+TLA +RRL PK +RR+ + L+ ALA G S AA+G A AGA + R D +DGC++LLF KG+ GR HS+ AP LLRVL +SLL PK + + G + H++R +E R WCF + + ++ LL H+R+PHSA++W+E+ + LGTA+AR +A +P PTG + G +E +AE A++RR L++ AV H GGILLR+ + KQ ALLA+A+
Sbjct: 17 GSNRFKFQGKQARAKRIDVDVAHKVRAEGFLDADKAQNPEV-EGGSFFQQELDRSKELNVTPPFKRFYYKVWPLVQSLPELLHHAPAVVDMLLALLEDPVVVTQAGEETLQLLSVLARDLQSSFFPHFPRVSTALIGLIASPDVSPEICGRVLRCLGFLLKFVARPLSKDMAAVRALYSPLLGHKRDFARKMAAQTLAPAVRRLKPKAMRRHAKQLVGALAAG--------------------------------------------------SVEAAAG---------------------------AEAGA---RRLRADTLDGCSQLLFFSAKGVHGRTHSQVGVGGSTHRSNKTQYAAIFFAALFVVALCRCAQAPVLLRVLLDSLLPPKLSDTNARPPGERAGGEDNHSRR---------------------KELERGWCFELASAVLALLVEHVRSPHSAELWLELHYGLGTAAARHRAS-----------------------------LPLRPPPTGGS-----------GDQEE------------------------SAECAAVRRTADLLSQAVGHMGGILLREEAIGVKQAALLAEAL 458
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A835YZH5_9STRA (DRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH5_9STRA) HSP 1 Score: 270 bits (691), Expect = 1.440e-74 Identity = 139/246 (56.50%), Postives = 174/246 (70.73%), Query Frame = 1
Query: 58 KTLNPE--AATGGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNA-DDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLPPKPLRRYVRSLLRALATGGAGPVATSAAM 786
K+LNP+ + +GGNRFKF K+ R VDVDV H+VR G+LD D + +P GEGGCFFQDELERC ++N TPPFKRFYY VWPLVQSL ELLH +ATV MLL ++ D T AGE+LLQL++++ARDL++ F+P F +MDVL LL A D+PE AG++ R VGY+LKF LL LR YYAPLLG+R D+VR +A ET AA+LR+L PK R + R+LLRALA A AA+
Sbjct: 4 KSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLPEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSATVAAMLLKLIQDPATHGVAGEQLLQLLSVLARDLQSAFHPHFAPSMDVLAALLQGPAGDEPEAAGRVMRAVGYILKFDIRPLLEDPAALRAYYAPLLGHRRDYVRRYAGETFAAVLRKLKPKAARAHARALLRALADAAAAXXXXXAAL 249
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A835YJ13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ13_9STRA) HSP 1 Score: 233 bits (595), Expect = 2.140e-69 Identity = 117/207 (56.52%), Postives = 148/207 (71.50%), Query Frame = 1
Query: 58 KTLNPE--AATGGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNA-DDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAE 669
K+LNP+ + +GGNRFKF K+ R VDVDV H+VR G+LD D + + GEGGCFFQDELERC ++N TPPFKRFYY VWPLVQSL ELLH +A V MLL ++ D T AGE+LLQL++++ARDL++ F+P F + DVL LL A D+PE AG++ R VGY+LKF LLA LR YYAPLLG+R D+VR +A +
Sbjct: 4 KSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGD 210
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A7R9YFR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFR7_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.960e-26 Identity = 86/231 (37.23%), Postives = 125/231 (54.11%), Query Frame = 1
Query: 94 RFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDA---AAVPASGEGG-----CFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLS-DRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNADDPEVAGKIFRTVGYLLKFV----GPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLPPKPLRRYVRSLLRALA 747
R +F+++ ++ V ++R +G L DA AV A E C EL+R ELN P +KR YY +WPLVQSL +LH +L LL +L+ C A LQL A+MA+DL+ E P FP+ +L A + DD E++ K F T+GY+L+F+ G L +L L P Y P LG+ D++R AA+T + LR++ K RR+V +L+A A
Sbjct: 28 RRRFRSEAYKLRKASVAPGEKLREEGGLRSDALDAGAVSAELESSFSGQRCALAVELDRQRELNIAPLWKRSYYELWPLVQSLAHVLHHRDAILERLLLLLAAPSPPCKATA---LQLAAVMAKDLQEELLPAFPKLSKAILT--AVDVDDAELSTKAFETLGYVLRFLAERSGAGKLPAL--LTPLYGPFLGHSRDYIRKLAAQTFSIALRKVGRKAFRRHVVGVLKAAA 251
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A0D2WIZ9_CAPO3 (DRIM domain-containing protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIZ9_CAPO3) HSP 1 Score: 118 bits (296), Expect = 7.450e-24 Identity = 82/213 (38.50%), Postives = 119/213 (55.87%), Query Frame = 1
Query: 100 KFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNADDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYR-GDHVRAFAAETLAALLRRLPPKPLRRYVRSLL 735
+FQ+ +R+ V ++V HRV G ++P+A GG FF + L + EL+ T F F +V+PLVQ+L +LL V+ LL L++ CAA LL L+A +ARDLR EFYP FPR+ ++ R+L + A+DP V F + YL KF+ L+ + D+ Y LL ++RAFAAE+ A LLR++P V LL
Sbjct: 41 QFQSFNERIKKVSINVAHRV-GAVAVEPEA--------GGSFFNEALMKWRELDCTREFVTFTNKVYPLVQTLHQLLFHKDAVIDALLVHLAE-PNCAAL-PALLDLLAQLARDLREEFYPDFPRSFVIVARVL-EEANDPPVIEAAFTALSYLFKFLLRYLIRDMRDVFRLYRHLLASDVRPYIRAFAAESFALLLRKVPANAFHNSVGLLL 241
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A2P6NS46_9EUKA (UTP20, small subunit (SSU) processome component n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS46_9EUKA) HSP 1 Score: 118 bits (295), Expect = 9.870e-24 Identity = 67/224 (29.91%), Postives = 119/224 (53.12%), Query Frame = 1
Query: 34 KGTGSVLAKTL---NPEAATGGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNADDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRL 696
K G+ AK L +A+ GNRFK+Q + +++ VDVD+ H++ G + S +F++ L + +LN T F F V+P+ SL ++L+ + G+L+ L + A A LL L ++RDL+ EFYP + L ++L PE+ IF+T+GY K++ ++ ++ + Y+ L+ +R D+V++++A+ A LLR+L
Sbjct: 405 KRQGNKAAKRLIKKPKQASESGNRFKYQGRNEKIAEVDVDIFHKIGG--------ITIKLSDPTSSYFRESLHQWTDLNLTRDFLNFSTEVYPISNSLAQILYHKKDIHGILIKHLQVPDSLALA--PLLNLACQLSRDLQEEFYPMMEETIKTLSKVLDSKLLQPEILESIFQTIGYFFKYLHKHVIQDINHVWSYFYSLVSHRDDYVKSWSAQVFAFLLRKL 618
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: A0A1Y1HR11_KLENI (Down-regulated in metastasis family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HR11_KLENI) HSP 1 Score: 117 bits (294), Expect = 1.320e-23 Identity = 85/229 (37.12%), Postives = 120/229 (52.40%), Query Frame = 1
Query: 58 KTLNPE-AATGGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNAD-DPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLPPKPLRRYVRSLLR 738
K+LN + G RF F++ QRV +VDVDV + F +P A G FFQ+ L + ELN F Y V+PLVQSLP+LL TV+ LL + + E +L L+A+++RDLR +F PF + LRLL AD +P+V +IF +V Y+ K + L L Y + +R D+VR FAAE ++ L R P K L + VR L++
Sbjct: 8 KSLNKSYSGPGTKRFVFKSFAQRVASVDVDVFRSLAPVKF-EPTA--------GTSFFQENLLQWRELNTAADFNLLYGEVYPLVQSLPQLLLHKKTVVRALLARMHIGALLSL--EPVLSLIAVLSRDLREDFLPFVAPFLGACLRLLEGGADREPDVLEQIFTSVSYVFKHLVKYLAKDLTQALKYTRLIRYHRRDYVRDFAAEAVSFLFRNAPLKQLIKGVRHLMK 225
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: UPI000C1CF337 (small subunit processome component 20 homolog n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF337) HSP 1 Score: 114 bits (286), Expect = 1.230e-22 Identity = 78/235 (33.19%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 46 SVLAKTLNPEAATGGNRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNAD-DPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLPPKPLRRYVRSLLRALA 747
S K+LN G RF F++ QR+ +D+DV L+P A P+ EG FF+D + ELN F FY ++PLVQ+LP+++ + +L LL L + + E +L+L+A ++RDL +F PF R D L LL AD +PE+ +IF + Y+L ++ L+ + + L Y D+VR F AE+++ LLR+ P + L+R +R+ + +A
Sbjct: 7 SQAVKSLN--TGPGRRRFTFKSFSQRIEEIDIDVYRS------LNP-LKAEPS--EGSSFFRDCIIEYRELNTAEDFISFYEEMFPLVQTLPQIILQKELILSYLLSRLKMKGRLSL--EPILRLIAALSRDLLEDFIPFLQRIADSLTSLLESGADREPEIIEQIFTSWSYILMYLQKYLIRQVGHVLSITVKLRYYPRDYVREFMAESVSFLLRKTPVQHLKRDIRNAMLEVA 228
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Match: S4RME1_PETMA (Uncharacterized protein n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RME1_PETMA) HSP 1 Score: 108 bits (270), Expect = 1.640e-22 Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 1
Query: 91 NRFKFQTKRQRVWAVDVDVVHRVRGDGFLDPDAAAVPASGEGGCFFQDELERCMELNATPPFKRFYYRVWPLVQSLPELLHRAATVLGMLLDMLSDRKTCAAAGEELLQLVAIMARDLRAEFYPFFPRAMDVLLRLLADNADDPEVAGKIFRTVGYLLKFVGPQLLASLDDLRPYYAPLLGYRGDHVRAFAAETLAALLRRLP 699
NRF+F T +R+ V++DV+HR+ G L S E +F + L++ +LNAT F F V L QS P+L+H V+ L L + A + LL LV +ARDL+A+FYP FP ++ LL D + F + YL K++ L+ + ++ Y+ LL ++ +H++ FAAE+ A L+R++P
Sbjct: 12 NRFRFLTFAERLANVNIDVIHRIDRTGSL---------SEEVETYFYEGLQKWKDLNATENFGTFLREVNGLCQSFPQLVHHQNAVVQALKAHLQVPNSLAL--QPLLDLVVQLARDLQADFYPHFPEFFSIVTGLL--QTQDTDQLEWAFCCLAYLYKYLWKPLIRDIQNVYSMYSTLLAHKKEHIKNFAAESFAFLMRKVP 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig711.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig711.1.3 >prot_P-wetherbeei_contig711.1.3 ID=prot_P-wetherbeei_contig711.1.3|Name=mRNA_P-wetherbeei_contig711.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=606bp MENRAKGLGVGKGTGSVLAKTLNPEAATGGNRFKFQTKRQRVWAVDVDVVback to top mRNA from alignment at P-wetherbeei_contig711:35..2398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig711.1.3 ID=mRNA_P-wetherbeei_contig711.1.3|Name=mRNA_P-wetherbeei_contig711.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2364bp|location=Sequence derived from alignment at P-wetherbeei_contig711:35..2398- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig711:35..2398- >mRNA_P-wetherbeei_contig711.1.3 ID=mRNA_P-wetherbeei_contig711.1.3|Name=mRNA_P-wetherbeei_contig711.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1818bp|location=Sequence derived from alignment at P-wetherbeei_contig711:35..2398- (Phaeothamnion wetherbeei SAG_119_79)back to top |