mRNA_P-wetherbeei_contig71.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: D8LGM4_ECTSI (Putative carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM4_ECTSI) HSP 1 Score: 168 bits (426), Expect = 2.440e-49 Identity = 114/201 (56.72%), Postives = 149/201 (74.13%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVVSGGATTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEH 603
M++V RTLG+C+RETGQAL G + + ++ +SRHRQ+MPL +P+VAKD++VAP+A+L+G V VS +ASVWYGAV+RGD G V IG +N+QDD ++ G ++GA T+GH AI+ ++ XXXXXXXXXXXXXXXXXXXXXXXXXX VV G+VWGGNPA ++R +T AEK+ + KSA GY ALA H
Sbjct: 1 MTSVSRTLGRCLRETGQALHRFGHQCQDSTLIMETFSRHRQLMPLAASAPAVAKDAWVAPSATLVGEVDVSGEASVWYGAVVRGDTGAVAIGKGSNVQDDAILGSGDVSVGAGVTIGHGAIIKSSTVADGSMVXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGAGQVWGGNPAVYMRDVTPAEKAQLTKSAEGYVALAGSH 201
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: A0A835Z4X6_9STRA (Putative carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X6_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.430e-48 Identity = 91/204 (44.61%), Postives = 126/204 (61.76%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVVSGGATTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
M+A+ R +GK VRETGQAL+ +G+ A + ++ ++++RHR MPL P++A ++VAP AS++G V +++ ASVWYGAV+RGDA VT+GAR+N+QDD V+SGGA +G D TVGH AI+ + S V G++W GNPA F R +T EK+Y+ KSAA YAALAA H AE
Sbjct: 1 MAALTRMIGKMVRETGQALEVLGVIAGDDKIHQEYFTRHRHTMPLGANKPALAPGAWVAPTASVVGDVALATDASVWYGAVVRGDAQRVTVGARSNVQDDAVLSGGAA-LGEDVTVGHGAIIAGSTVGDRCLIGMKAVLDGADVASDAIIAANAVVRPGSKVLSGQMWAGNPAVFRRALTPDEKAYLAKSAASYAALAAAHRAE 203
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: A0A087H203_ARAAL (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087H203_ARAAL) HSP 1 Score: 143 bits (360), Expect = 1.390e-38 Identity = 85/214 (39.72%), Postives = 115/214 (53.74%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVVSGGAT---------TIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
+ V+ T+GK +R TGQALD VG + +H SRHR +M + DKSP V KD FVAP+AS+IG V + +S+WYG V+RGD ++IG+ N+QD+ +V T TIG + T+GHSA++ A + +P GEVWGGNPAKF+RK+T+ E Y+ KSA Y LA H AE
Sbjct: 4 LGRVIYTVGKAIRVTGQALDRVGSTLQGGHRFEEHLSRHRTLMNVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISIGSGTNIQDNSLVHVAKTNLSNKSLPTTIGDNVTIGHSAVIHACTVEDEAFVGMGATLLDGVVVEKHAMVAAGSLVKGNTRIPSGEVWGGNPAKFMRKLTDEEIDYISKSAENYINLAQIHAAE 217
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: M0ZVI4_SOLTU (Protein yrdA n=12 Tax=Solanaceae TaxID=4070 RepID=M0ZVI4_SOLTU) HSP 1 Score: 142 bits (359), Expect = 1.680e-38 Identity = 107/208 (51.44%), Postives = 136/208 (65.38%), Query Frame = 1
Query: 19 TLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVV-------SGGA--TTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
T+G +RETGQALD +G + +H SRHR +M L DK P V KD+FVAP+AS+IG V + AS+WYG V+RGD V+IGA N+QD+ ++ SG T IG + T+GHSA+L XXXXXXXXXXXXXXXXXXXXX + +P GEVWGGNPA+FLRK+TE E +++ +SAA Y+ LA H AE
Sbjct: 10 TVGFWIRETGQALDRLGCRLQGNYYFQEHLSRHRTLMNLFDKVPVVEKDAFVAPSASIIGDVHIGRSASIWYGCVLRGDVNSVSIGAGTNVQDNSLIHVAKSNISGKVLPTIIGKNVTIGHSAVLHGCTVEDEAFIGMGAXXXXXXXXXXXXXXXXXXXXXQNTRIPFGEVWGGNPARFLRKLTEEEIAFISESAANYSNLAQVHAAE 217
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: A0A0C9RRV5_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_16728_1325 transcribed RNA sequence n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RRV5_9SPER) HSP 1 Score: 141 bits (355), Expect = 4.780e-38 Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVV---------SGGATTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
+ + T+G VRETGQALD +G K + + SRHR +M L DK+P+VAKD FVAP+A+L+G V V +S+WYG ++RGD +T+G+ N+QD+ +V S T IG++ T+GHSA+L XXXXXX + +P GEVWGGNPAKFLRK+TE E ++ +SA YA LA H +E
Sbjct: 4 LGKAIYTVGLWVRETGQALDRLGSRLQGKYGFQEQLSRHRPLMNLVDKAPNVAKDVFVAPSATLVGDVKVGQGSSIWYGCILRGDVKGITVGSGTNIQDNTLVHVAKTNISRSVLPTVIGSNVTIGHSAVLHGCTIEDEAFIGMGATLLDGVVVENNXXXXXXALVRQNTRIPSGEVWGGNPAKFLRKLTEDEVAFFPQSATNYANLAEGHLSE 217
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: A0A0D3D8H2_BRAOL (Uncharacterized protein n=9 Tax=Brassiceae TaxID=981071 RepID=A0A0D3D8H2_BRAOL) HSP 1 Score: 140 bits (354), Expect = 6.740e-38 Identity = 108/214 (50.47%), Postives = 136/214 (63.55%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVV-------SGGA--TTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
M L ++G +RETGQALD +G K + + SRHR +M + DKSPSV K +FVAP+ASLIG V V +S+WYG V+RGDA +++GA N+QD+ +V SG T IG + T+GHSA+L XXXXXXXXXXXXXXXXXXXXX +P GEVWGGNPA+FLRK+TE EK++ SA Y+ LA H E
Sbjct: 3 MGRALYSVGFWIRETGQALDRLGCRLQGKNHFREQLSRHRTLMNVFDKSPSVDKQAFVAPSASLIGNVHVGPASSIWYGCVLRGDANSISVGAGTNIQDNTLVHVAKSNLSGKVLPTLIGDNVTIGHSAVLHGCTVEDEAYIGASATXXXXXXXXXXXXXXXXXXXXXXXXIPSGEVWGGNPARFLRKVTEEEKAFFSSSAVDYSNLAQVHAVE 216
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: A0A6J1GIE2_CUCMO (gamma carbonic anhydrase 1, mitochondrial-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1GIE2_CUCMO) HSP 1 Score: 140 bits (354), Expect = 8.930e-38 Identity = 96/214 (44.86%), Postives = 133/214 (62.15%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVV-------SGGA--TTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
+ + T+G +RETGQA+D +G + + + SRHR +M + DK+P V KD+FVAP+AS+IG V V S +S+WYG V+RGDA +++G+ N+QD+ +V SG T IG + T+GHSA+L XXXXXXXXXXXXXX +P GEVWGGNPAKFLRK+T+ E++++ +SA Y+ LA H AE
Sbjct: 4 LGKAIYTVGFWIRETGQAIDRLGCRLQGRYFFQEQLSRHRTLMNVFDKAPVVDKDAFVAPSASIIGDVQVGSGSSIWYGCVLRGDANSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTIGHSAVLHGCTVEDEAFIGTGAMLLDGSIVXXXXXXXXXXXXXXXTKIPSGEVWGGNPAKFLRKLTDEERAFISQSATNYSDLAQVHVAE 217
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: K3XL18_SETIT (Uncharacterized protein n=12 Tax=Panicoideae TaxID=147369 RepID=K3XL18_SETIT) HSP 1 Score: 140 bits (353), Expect = 1.110e-37 Identity = 85/207 (41.06%), Postives = 115/207 (55.56%), Query Frame = 1
Query: 22 LGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVV-------SGGA--TTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
+G +RETGQALD +G + + SRHR +M + DK+P V +D+FVAP+ASLIG V V AS+WYG V+RGDA + IG+ N+QD+ +V SG T IG + TVGHSA+L + +P GEVWGGNPAKFLRK+T+ E +++ +SAA Y +L+ EH AE
Sbjct: 11 VGFWIRETGQALDRLGCRLQGNYFFHEQISRHRTLMNIFDKTPHVHRDAFVAPSASLIGDVQVGPGASIWYGCVLRGDANNIQIGSGTNIQDNSLVHVAKSNLSGKVFPTIIGENVTVGHSAVLQGCTIEDEAFVGMGATLLDGVIVEKHGMVAAGALVRQNTRIPSGEVWGGNPAKFLRKLTDDEIAFIAESAANYFSLSKEHAAE 217
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: UPI000E6FA9AF (gamma carbonic anhydrase 1, mitochondrial-like n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FA9AF) HSP 1 Score: 140 bits (353), Expect = 1.430e-37 Identity = 80/214 (37.38%), Postives = 115/214 (53.74%), Query Frame = 1
Query: 1 MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVVSGGATT---------IGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
+ + T+G +RETGQA+D +G + + SRHR +M + DK+PSV+KD+FVAP+AS+IG V + +S+WYG V+RGD +++G+ N+QD+ ++ T IG + TVGHSA+L +P GEVWGGNPAKFLRK+TE E +++ KSA Y+ LA H AE
Sbjct: 4 LGKAIYTVGFWIRETGQAMDRLGSRLQGNYYFHEQLSRHRTLMNMFDKAPSVSKDAFVAPSASIIGDVQIGRASSIWYGCVLRGDVNHISVGSGTNIQDNSLIHVAKTNLKGKVLPTVIGDNVTVGHSAVLHGCTVEDESFVGMGATLLDGVVVEKHGMVAAGALVRQDTRIPSGEVWGGNPAKFLRKLTEEEIAFISKSATNYSNLAQVHAAE 217
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Match: A0A022QR32_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QR32_ERYGU) HSP 1 Score: 139 bits (351), Expect = 2.100e-37 Identity = 84/208 (40.38%), Postives = 112/208 (53.85%), Query Frame = 1
Query: 19 TLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPSVAKDSFVAPNASLIGGVTVSSKASVWYGAVIRGDAGPVTIGARANLQDDVVVSGGA---------TTIGADTTVGHSAILMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV-VPKGEVWGGNPAKFLRKMTEAEKSYVGKSAAGYAALAAEHDAE 612
T+G +RETGQALD +G + + SRHR +M L DK+P V KD FVAP+AS+IG V V S +S+WYG V+RGD V+IG+ N+QD+ +V T IG + TVGHSAIL + +P GE+WGGNPAKFLRK+T+ E +++ +SA Y+ LA H AE
Sbjct: 9 TVGFWIRETGQALDRLGCRLQGNYFFQEQLSRHRTLMNLFDKAPFVQKDVFVAPSASIIGDVHVGSNSSIWYGCVVRGDVNKVSIGSGTNIQDNSLVHVAKSNLYGKVLPTLIGDNVTVGHSAILHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNTRIPSGEIWGGNPAKFLRKLTDDEIAFIAQSAINYSKLAQAHAAE 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig71.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig71.3.1 >prot_P-wetherbeei_contig71.3.1 ID=prot_P-wetherbeei_contig71.3.1|Name=mRNA_P-wetherbeei_contig71.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp MSAVLRTLGKCVRETGQALDTVGLAATEKLVYLDHWSRHRQMMPLDDKSPback to top mRNA from alignment at P-wetherbeei_contig71:5414..6631+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig71.3.1 ID=mRNA_P-wetherbeei_contig71.3.1|Name=mRNA_P-wetherbeei_contig71.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1218bp|location=Sequence derived from alignment at P-wetherbeei_contig71:5414..6631+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig71:5414..6631+ >mRNA_P-wetherbeei_contig71.3.1 ID=mRNA_P-wetherbeei_contig71.3.1|Name=mRNA_P-wetherbeei_contig71.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig71:5414..6631+ (Phaeothamnion wetherbeei SAG_119_79)back to top |