mRNA_P-wetherbeei_contig71.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig71.2.1
Unique NamemRNA_P-wetherbeei_contig71.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: D7FYM7_ECTSI (Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM7_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 7.300e-129
Identity = 184/245 (75.10%), Postives = 207/245 (84.49%), Query Frame = 3 
Query:  261 APIWHSEARLDVPAALKGDGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            APIWHSE   D+     G   IDHGVTQNPF+  WSPYDFNGGTTLAIAG DYVVVA DTRMSTGYSIMSRDQTKLH+LTSKCVI+SAGC++DVTTLWK LD+ MTMY+HN+ +EM T +VAQMLANTLY RRFFPYY+FNVLCGLDE+G+G+V+SYDAIGSFER   SASGSGQTYIIPLLDN+V+FK R D KP R+A E VELVK++ +TAGERDIYTGDAVEIT+IS  G  T  F LKKD
Sbjct:   10 APIWHSEGTKDLQVLSSG---IDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A835ZC48_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC48_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.290e-125
Identity = 178/243 (73.25%), Postives = 206/243 (84.77%), Query Frame = 3 
Query:  267 IWHSEARLDVPAALKGDGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            +W +E + DV  +      IDHGVTQNPF+  WSPYDFNGGTTLA+AG DYVV+  DTRMSTGY IMSRDQTKLH+LTSKCVI+SAGCRSDVTTLWKMLD RM MY+HN+G++M+T + AQMLANTLY RRFFPYY+FNVL GLD EG+GAV+SYDAIGS+ER   SASGSGQ+YIIP++DN+V FK R DPKP RTAEE V+LVKDVFITAGERDIYTGDAVEI +I+A+G +T  F LKKD
Sbjct:   18 MWSTEGQSDVRPS-----DIDHGVTQNPFERRWSPYDFNGGTTLAVAGEDYVVIGADTRMSTGYQIMSRDQTKLHQLTSKCVIASAGCRSDVTTLWKMLDHRMVMYKHNIGKDMSTPAAAQMLANTLYYRRFFPYYSFNVLAGLDAEGKGAVFSYDAIGSYERVEYSASGSGQSYIIPVMDNLVGFKTRLDPKPVRTAEETVDLVKDVFITAGERDIYTGDAVEICIITATGTQTQIFNLKKD 255
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A7S2DDA1_9STRA (Proteasome subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDA1_9STRA)

HSP 1 Score: 344 bits (883), Expect = 3.110e-114
Identity = 164/244 (67.21%), Postives = 200/244 (81.97%), Query Frame = 3 
Query:  264 PIWHSEARLDVPAALKGDGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            PIWHSE +  VP     D +IDHGVTQNP++  +SPYDFNGGTTLA+AG D+VVVAGDTRMS+GY I+SR  +KLH LTSKC++++AGC++DV TL  ML+I+M MY+H+ G+EM+T + AQML+NTLY RRFFPYY+FNVL GLDEEGRGAV+SYDAIGS+ERT  SASGSGQ+Y+IPL+DN+V FK R D  P  T+EE V +VKD F+TAGERDIYTGD +EI+VI   G ET TF LKKD
Sbjct:   54 PIWHSEGQASVPLGPTAD-TIDHGVTQNPYERRFSPYDFNGGTTLAVAGKDFVVVAGDTRMSSGYEILSRKVSKLHPLTSKCILAAAGCKTDVDTLTNMLNIKMQMYDHDCGKEMSTTAAAQMLSNTLYYRRFFPYYSFNVLAGLDEEGRGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRTDVMPDFTSEEAVNIVKDAFVTAGERDIYTGDTLEISVIKKDGIETITFPLKKD 296
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A7S2XWL8_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWL8_9STRA)

HSP 1 Score: 332 bits (850), Expect = 7.530e-110
Identity = 162/249 (65.06%), Postives = 195/249 (78.31%), Query Frame = 3 
Query:  258 GAPIWHSEARLDV--PAALKGDGSID-HGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            G PIWHSE+      P  L  +GS   H V+  P QH W PY+FNGGTTLAIAG ++VVVA DTRMS GY+I+SR+++KLHKLT KC++++AGC++DVTTL  +LDIRM MY+HNVG EM T +VAQMLANTLY RRFFPYY+FNVLCG+D+EG+G VYSYDAIGSFE    SASGSGQ+YIIPL+D+ V FKNR  PKP  T EE V++VK  F+TAGERDIYTGD VEI V++A G  +  F LKKD
Sbjct:    7 GVPIWHSESSNSTVKPYQLPVNGSSQKHEVSGGPVQHRWGPYEFNGGTTLAIAGSNFVVVAADTRMSQGYNILSRNESKLHKLTEKCILAAAGCQTDVTTLRNVLDIRMQMYQHNVGHEMPTTAVAQMLANTLYYRRFFPYYSFNVLCGIDKEGKGVVYSYDAIGSFESVPYSASGSGQSYIIPLMDSTVAFKNRTQPKPNYTIEETVDIVKSAFVTAGERDIYTGDEVEIKVLTAEGCRSEIFPLKKD 255
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A7S2FLM8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLM8_9STRA)

HSP 1 Score: 329 bits (844), Expect = 8.320e-109
Identity = 165/247 (66.80%), Postives = 199/247 (80.57%), Query Frame = 3 
Query:  264 PIWHSEARLDVPAAL---KGDGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            PIW SE     P+A    K D  IDHGVT+NP++  +SPYDFNGGTTLA++G D+VVVAGDTRMS+GY I SR+  KLH+LTSK V+++AGC++DV TL  +L  RM MYEH+  +EM+T +VAQML+NTLYGRRFFPYY+FNVL GLDEEG+GAV+SYDAIGS+ERT  SASGSGQ+Y+IPL+DN+V FK R DP P  T EE+V +VKD F+TAGERDIYTGDAVEI VISA+G  T  F LKKD
Sbjct:   23 PIWSSEG----PSAGEFGKRD-HIDHGVTENPYERRFSPYDFNGGTTLAVSGKDFVVVAGDTRMSSGYEIKSRNVPKLHQLTSKTVLAAAGCKTDVDTLTNLLRTRMQMYEHDCNKEMSTTAVAQMLSNTLYGRRFFPYYSFNVLAGLDEEGKGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRLDPVPDMTVEEIVSIVKDAFVTAGERDIYTGDAVEIKVISATGVTTELFPLKKD 264
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A7S4N8E0_9STRA (Proteasome subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8E0_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.540e-104
Identity = 150/250 (60.00%), Postives = 195/250 (78.00%), Query Frame = 3 
Query:  264 PIWHSEARLDVPAALKG------DGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            PI ++E    +P +  G      DGSIDHGVT+NP++  +SPY+FNGGTTLAI+G DY VVAGDTR+S GY I++RD TKLH+LT + V++SAGC++D+  LW +LDI+  +Y+HN  + M+ +S AQML NTLYGRRFFPYY+FNVL G+D EG+GAVYSYDA+GSFERT  SA+GSGQ+++IPL+DNV+  KNR D +    ++E+VE+VKD F+TAGERDIYTGD VEI VI+  G + TTF LK D
Sbjct:   21 PIRNTEGGATLPVSFDGAPTAGDDGSIDHGVTKNPYERRFSPYEFNGGTTLAISGKDYAVVAGDTRLSEGYEILTRDVTKLHELTDRVVLASAGCKTDIDQLWSVLDIKCNVYKHNHRKTMSVESSAQMLGNTLYGRRFFPYYSFNVLAGVDSEGKGAVYSYDAVGSFERTPFSATGSGQSFLIPLMDNVISHKNRNDERRELGSDEVVEIVKDAFVTAGERDIYTGDKVEIAVITKDGIQRTTFDLKAD 270
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: W7TXA2_9STRA (Proteasome subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXA2_9STRA)

HSP 1 Score: 317 bits (813), Expect = 3.950e-104
Identity = 157/248 (63.31%), Postives = 197/248 (79.44%), Query Frame = 3 
Query:  267 IWHSE--ARLDVPAALK---GDGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            IW +E  ARL   A +     DGSIDHGVTQ P++  +SPYDFNGGT LAIAG D+ VVAGDTR+STGY I+SR+  KL KLTSK V++SAGC +DV TL ++LD+R+ MYEH+ G+E++T +VAQ+L NTLY RRFFPYYAFNVL G+D+EG+G V+SYDA+GS ER   SASGSGQ ++IP++DN+V FKNR DPKP  TA ++V + KD F+TAGERDIYTGDAV I+VI+A+G  T TF LK+D
Sbjct:   16 IWSTEGAARLGSGATVTTSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPVMDNIVGFKNRQDPKPEYTAADIVAICKDAFLTAGERDIYTGDAVTISVITAAGVTTETFELKRD 263
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: B8BSP9_THAPS (Proteasome subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSP9_THAPS)

HSP 1 Score: 316 bits (810), Expect = 2.010e-103
Identity = 155/234 (66.24%), Postives = 188/234 (80.34%), Query Frame = 3 
Query:  297 PAALKGDGS-IDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            P AL  DGS IDHG+TQ+P++  +SPY+FNGGTTLAI+GPDY VVA DTR+S+GY I+SR+ +KLH LT KCV+ SAGC++DV  L  +LDI+M +Y HN  + M T SVAQML NTLY +RFFPYY+FNVL G+D EG+GAVYSYDAIGSFERT  SASGSGQ ++IPL+DNV+  KNR D K    +EE+VE+VKD F+TAGERDIYTGDAVEI VI+A G E+ TF LK D
Sbjct:   47 PTALDIDGSNIDHGITQSPWERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A7S2SKB7_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKB7_9STRA)

HSP 1 Score: 315 bits (807), Expect = 2.520e-103
Identity = 152/243 (62.55%), Postives = 191/243 (78.60%), Query Frame = 3 
Query:  267 IWHSEARLDVPAALKGDGSIDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            +W SE  + +PA      + DHGVTQNP++  +SPYDFNGGTTLAIAG D+VVVA DTR+S+GY I+SR+ +KLH LT +CV+++AGC++DV TL   L  RM MYEH++G+ M T +VAQML+NTLY RRFFPYY+FNVL G+D +G+GAV+SYDAIGS+ER   S+SGSGQ Y++PL+DN+V FKNR D  P  T EE+V +VKD FITAGERDIYTGDAVEI VI+ASG  +    LKKD
Sbjct:   17 MWSSEGAVALPAEPS---AFDHGVTQNPYERRFSPYDFNGGTTLAIAGKDFVVVAADTRLSSGYEILSRNVSKLHPLTGRCVLAAAGCKTDVDTLRNTLHARMQMYEHDMGKAMDTPAVAQMLSNTLYYRRFFPYYSFNVLAGIDSDGKGAVFSYDAIGSYERVPYSSSGSGQNYMVPLMDNLVCFKNRQDTPPELTMEEVVRIVKDAFITAGERDIYTGDAVEIKVITASGVASEIMPLKKD 256
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BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Match: A0A7S3PW57_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW57_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.280e-102
Identity = 155/253 (61.26%), Postives = 191/253 (75.49%), Query Frame = 3 
Query:  264 PIWHSEARLDVPAAL-----KGDGS----IDHGVTQNPFQHGWSPYDFNGGTTLAIAGPDYVVVAGDTRMSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHNVGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIGSFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVFITAGERDIYTGDAVEITVISASGQETTTFALKKD 995
            P+  SE    +P +        DG     IDHGVTQ P++  +SPYDFNGGTTLAI+GPDY +VA DTR+STGY I+SR+ TKLH+LTSKCV+ SAGC++D+  L  +LDI   +Y HN  +EM+T SVAQML NTLY +RFFPYY+FNVL G+D+EG+GAVYSYDAIGSFERT V+A+GSGQ+++IPLLDNV+   NR D K    AEE+VE+VKD F+TAGERDIYTGD +EI VI ASG    +F LK D
Sbjct:   21 PVHSSEGGATIPVSFTQNNPNADGEDYNHIDHGVTQAPYERSFSPYDFNGGTTLAISGPDYAIVAADTRLSTGYQILSRNVTKLHELTSKCVLGSAGCKTDIDQLRSVLDINQKVYHHNHRKEMSTPSVAQMLGNTLYYKRFFPYYSFNVLAGVDKEGKGAVYSYDAIGSFERTPVTATGSGQSFLIPLLDNVIKHNNRNDEKRDLPAEEVVEIVKDAFVTAGERDIYTGDMLEIKVIRASGITNISFPLKAD 273
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig71.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYM7_ECTSI7.300e-12975.10Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC48_9STRA1.290e-12573.25Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DDA1_9STRA3.110e-11467.21Proteasome subunit beta n=1 Tax=Dictyocha speculum... [more]
A0A7S2XWL8_9STRA7.530e-11065.06Proteasome subunit beta n=1 Tax=Fibrocapsa japonic... [more]
A0A7S2FLM8_9STRA8.320e-10966.80Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A7S4N8E0_9STRA3.540e-10460.00Proteasome subunit beta n=1 Tax=Odontella aurita T... [more]
W7TXA2_9STRA3.950e-10463.31Proteasome subunit beta n=2 Tax=Monodopsidaceae Ta... [more]
B8BSP9_THAPS2.010e-10366.24Proteasome subunit beta n=1 Tax=Thalassiosira pseu... [more]
A0A7S2SKB7_9STRA2.520e-10362.55Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
A0A7S3PW57_9STRA1.280e-10261.26Proteasome subunit beta n=1 Tax=Chaetoceros debili... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig71contigP-wetherbeei_contig71:3522..5072 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYM7
Preferred namePSMB1
PFAMsProteasome
Model size1212
Max annot lvl2759|Eukaryota
KEGG koko:K02732
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019748,GO:0019774,GO:0019941,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042175,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048046,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051704,GO:0051707,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0090068,GO:0097708,GO:0098542,GO:0098827,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
Exons2
Evalue2.95e-98
EggNOG OGsCOG0638@1|root,KOG0179@2759|Eukaryota
Ec32 ortholog descriptionProteasome, subunit alpha/beta
Ec32 orthologEc-26_002800.1
EC3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size555
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186958.2306333-UTR-P-wetherbeei_contig71:3521..39641683186958.2306333-UTR-P-wetherbeei_contig71:3521..3964Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig71 3522..3964 +
1683186958.278653-UTR-P-wetherbeei_contig71:4858..50721683186958.278653-UTR-P-wetherbeei_contig71:4858..5072Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig71 4859..5072 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186958.2468607-CDS-P-wetherbeei_contig71:3964..41011683186958.2468607-CDS-P-wetherbeei_contig71:3964..4101Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig71 3965..4101 +
1683186958.2686126-CDS-P-wetherbeei_contig71:4440..48581683186958.2686126-CDS-P-wetherbeei_contig71:4440..4858Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig71 4441..4858 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig71.2.1prot_P-wetherbeei_contig71.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig71 3965..4858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig71.2.1

>prot_P-wetherbeei_contig71.2.1 ID=prot_P-wetherbeei_contig71.2.1|Name=mRNA_P-wetherbeei_contig71.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
MSTGYSIMSRDQTKLHKLTSKCVISSAGCRSDVTTLWKMLDIRMTMYEHN
VGREMTTQSVAQMLANTLYGRRFFPYYAFNVLCGLDEEGRGAVYSYDAIG
SFERTSVSASGSGQTYIIPLLDNVVDFKNRADPKPTRTAEEMVELVKDVF
ITAGERDIYTGDAVEITVISASGQETTTFALKKD*
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mRNA from alignment at P-wetherbeei_contig71:3522..5072+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig71.2.1 ID=mRNA_P-wetherbeei_contig71.2.1|Name=mRNA_P-wetherbeei_contig71.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1551bp|location=Sequence derived from alignment at P-wetherbeei_contig71:3522..5072+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTGCGAAAGCACGCCGAGACTCGAAAAACGAGGAAAGAGCCGGGATAG
TCCCAGGCGCTAAGTGATATGGCACCAACACATCCGAGGTGAGCCCGTAA
TTGTCGAGGTGTTGCGCAAAACCTTTTTCCTCTCTCTCGTGTTGCTCCCC
TGTCCCTCCCTCTCACGTGTTGGCTCGCTCAACAAGGTTTCTCTCTGAAA
CAAGCATGCGCTCGCGACATCGCACGCCCACTCGCCGCCACCCGCCGTTG
CAGCGTCGGCGCGCCGATCTGGCATAGCGAGGCGCGGCTCGACGTGCCGG
CGGCACTCAAGGGGGACGGGTCCATCGACCACGGCGTGACGCAGAACCCT
TTCCAGCACGGATGGAGCCCATACGACTTCAACGGAGGCACAACGCTGGC
GATCGCGGGGCCGGACTATGTGGTGGTGGCCGGCGACACGCGGATGTCGA
CGGGCTACTCGATCATGTCGCGGGACCAGACGAAGCTTCACAAGCTAACC
AGCAAGTGCGTCATCTCCAGCGCGGGCTGCCGGAGTGACGTCACGACGCT
GTGGAAGATGCTCGACATTAGAATGACAATGTGAGTTGTTTTCCCTCTCT
TTGGGGAAAGCAACAACGGATTGGAAATATGTCGCGAAGCGGTTTATGTC
GGCGTGCTTGCGTCGCAGGGTTCCTTAGGATACGCGACTGTTTACCTGTT
ACTATCGGCGTTGCTTGTTGTGCCAGATCCATTGAGAGTTTTGCTCGCTA
CCTCTTCTTTGACTATGAAAGCTACGGCAAAGACAGCATTGACCATGTGC
ACAACTTTTGCCGCTTATGTCGACGCGTGCGACGCTCGGCCAGACAGACG
AACAGAGCCAAACTGTCCTAAGGAGAGAATAACATCTGAACAACCAATTC
CTTTTCTGTGACGCGACAGGTACGAGCACAACGTGGGGCGCGAGATGACG
ACGCAGTCCGTGGCGCAGATGCTGGCCAACACGCTGTACGGCCGGCGCTT
CTTCCCCTATTACGCCTTCAATGTGCTCTGCGGGCTCGATGAGGAGGGCC
GCGGCGCCGTCTACTCGTATGATGCCATCGGTTCTTTTGAGCGGACGTCC
GTCTCCGCGTCGGGCTCTGGCCAGACGTATATCATCCCGCTGCTGGACAA
TGTGGTCGACTTCAAGAACCGGGCCGACCCTAAGCCGACGCGCACGGCCG
AGGAGATGGTGGAGCTCGTCAAGGACGTGTTCATCACGGCGGGCGAGCGG
GACATCTACACGGGCGACGCCGTCGAGATCACCGTTATCTCGGCGAGCGG
CCAGGAGACCACCACCTTTGCACTCAAGAAGGACTGAGCGGCGGAGGGCG
GAGAGGACAGGAGGAGGAGGAATAGGAGCCGAGCTAGCGCGGCCGGCATA
GGTGGCGTCTGGTTGCCGTGGCGTTGGCGCTGACGGCGGCGGCGTCGCGG
CGGCGCTGCACCCTTTTTTCCTGGCCATTTTCGGCGGTGCCGTCTGCTGT
GCTGTCTGCCCGGCTTCTTCAGTTCCGCGCCGGCGCCTGCCGGCGGTCGC
C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig71:3522..5072+

>mRNA_P-wetherbeei_contig71.2.1 ID=mRNA_P-wetherbeei_contig71.2.1|Name=mRNA_P-wetherbeei_contig71.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig71:3522..5072+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGACGGGCTACTCGATCATGTCGCGGGACCAGACGAAGCTTCACAA
GCTAACCAGCAAGTGCGTCATCTCCAGCGCGGGCTGCCGGAGTGACGTCA
CGACGCTGTGGAAGATGCTCGACATTAGAATGACAATGTACGAGCACAAC
GTGGGGCGCGAGATGACGACGCAGTCCGTGGCGCAGATGCTGGCCAACAC
GCTGTACGGCCGGCGCTTCTTCCCCTATTACGCCTTCAATGTGCTCTGCG
GGCTCGATGAGGAGGGCCGCGGCGCCGTCTACTCGTATGATGCCATCGGT
TCTTTTGAGCGGACGTCCGTCTCCGCGTCGGGCTCTGGCCAGACGTATAT
CATCCCGCTGCTGGACAATGTGGTCGACTTCAAGAACCGGGCCGACCCTA
AGCCGACGCGCACGGCCGAGGAGATGGTGGAGCTCGTCAAGGACGTGTTC
ATCACGGCGGGCGAGCGGGACATCTACACGGGCGACGCCGTCGAGATCAC
CGTTATCTCGGCGAGCGGCCAGGAGACCACCACCTTTGCACTCAAGAAGG
ACTGA
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