mRNA_P-wetherbeei_contig7098.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7098.1.1
Unique NamemRNA_P-wetherbeei_contig7098.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A6H5JJY8_9PHAE (DUF2013 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY8_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 5.090e-22
Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  929 ILRELRDHPARSSVQEALLHIFNAEGFPANNDVVAAHCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDI 1255
            +L  L DH AR  VQ A+LHIFN EG+P  +  +A  C  FC D  E    ED FYVND+K+MVDI++RE  N P  D LR +YL LLR++ ERS W+  G R+R  DI
Sbjct: 1097 VLPALLDHLARHEVQGAVLHIFNEEGYPNGDAELARLCSVFCSDAFEKDRREDLFYVNDVKVMVDIILRELYNLPAHDGLRADYLELLRKLLERSEWSTRGARYREVDI 1205          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: D7G065_ECTSI (DUF2013 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G065_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.620e-16
Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 2
Query:  929 ILRELRDHPARSSVQEALLHIFNAEGFPANNDVVAAHCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQV 1201
            +L  L DH AR  VQ A+LHIFN EG+P  +  +A  C  FC D  E    ED FYVND+K+MVDI++RE  N P  D LR +YL LLR +
Sbjct:  854 VLPALLDHLARHEVQGAVLHIFNEEGYPNGDAELARLCSVFCSDAFEKDRREDLFYVNDVKVMVDIILRELYNLPADDGLRADYLELLRSL 944          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A2R5G9T3_9STRA (NCK-interacting protein with SH3 domain n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9T3_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.130e-8
Identity = 46/167 (27.54%), Postives = 74/167 (44.31%), Query Frame = 2
Query:  857 EAVFLAATRVALALNEQ------------SFTGSHKILRELRDHP------------ARSSVQEALLHIFNAEGFPANNDVVAAHCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVEMLENTLRA 1285
            E VFL AT V +ALN                TG   +   L D P                  EA+LH+ N+  +P  + ++    ++  + +       DFF++ND+K+M+DIV+ +  + P+ D+ R EYL +L      S W      +R  +I+E L+  L A
Sbjct:  492 EDVFLMATYVLVALNSHFPFTAHPNRTMGPETGDEDMTETLDDEPNLVVSVLKSDSHKAEFFSEAILHLLNSSTYPYEDPILLGQLLYMFRALFSTRATRDFFHLNDLKVMIDIVLLQIRDLPLDDEFRSEYLRVLHLTIINSPWKG----YRRAEILESLDAVLEA 654          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A8K1CF65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF65_PYTOL)

HSP 1 Score: 65.1 bits (157), Expect = 9.920e-8
Identity = 43/132 (32.58%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  905 QSFTGSHKILRELRDHPARSSVQE---ALLHIFNAEGFPANNDVVAA--HCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVEMLENTLRA 1285
            Q  T +  +L  +    +R  VQ    ALLH+ N+ GFP   + ++     I    DVL    +    Y+ND K+++DI++REC + P+ D LR +YLGLL  +A  S+     + +R  + +++LE+ L A
Sbjct:  187 QQHTPNGVLLDLVLSDASREGVQHVSGALLHVINSCGFPCPENRLSQLRDAIQLFCDVLRHPRVYQIVYLNDFKVLLDILLRECTDLPLEDALRDDYLGLL-DLALGSALYLHSQTYRKAEFLKLLEDLLDA 317          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A2D4BR44_PYTIN (DUF2013 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR44_PYTIN)

HSP 1 Score: 62.0 bits (149), Expect = 9.750e-7
Identity = 62/195 (31.79%), Postives = 92/195 (47.18%), Query Frame = 2
Query:  728 LVFLEALLGATEAARLALPTGRGRFNAAFLVRTVLDAVAGGGVEAVFLAATRVALAL----NEQSFTGSHKILRELRDHPARSSVQE---ALLHIFNAEGFPANNDVVAA--HCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVEMLENTLRA 1285
            L FL+ +L AT  AR+     R    A+ L + V   + G     VF AAT + LA       Q  + S  +L  +    +R   Q    ALLH+ N+ G P     +      I    D+L  + +    +VND K++VDIV+REC + P+ D LR +YL LL  V   S        +R  ++++MLE+ L A
Sbjct:  124 LAFLDHVLSATTDARVFARAFRHSTYASMLAKMVR--LLGVCSTRVF-AATTICLAAFHHXERQLASDSSVLLDSVLIETSRDGSQHVGGALLHVINSCGCPCPESRLPQLRQAIQLLLDILTHAQVFRVVFVNDFKVLVDIVLRECTDLPLEDALRLDYLRLL-DVVIASPLYLXAHLYRKAELLKMLEDLLTA 314          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A812V7L5_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V7L5_SYMMI)

HSP 1 Score: 59.7 bits (143), Expect = 1.500e-6
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 2
Query:  938 ELRDHPARSSVQEALLHIFNAEGFPANNDVVAAHCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPM 1156
            +  +  A  ++ E L+H+ N  GFP ++      C+  C D++     + FFY NDIK++VD++IRE  N P+
Sbjct:   93 QFMEEVASVNISEGLMHLLNDVGFPEHDVSETLPCLKLCCDLVMVPDFDGFFYSNDIKILVDVIIRELTNLPL 165          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A484ED55_BRELC (DUF2013 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED55_BRELC)

HSP 1 Score: 61.2 bits (147), Expect = 1.580e-6
Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 2
Query:  926 KILRELRDHPARSSVQEALLHIFNAEGFPANND--VVAAHCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVEMLENTLRA 1285
            ++LR+++D   R  V  ALLH+ N+ G P   +  V   + +   +D+L         +VND K+++D++IREC + P  D  R  YL +L Q  + S      + +R  ++ E+LE+ L A
Sbjct:  180 EVLRDMKD--GRELVSGALLHVINSCGCPCPTERTVHLWNALQLFEDILADKIASMLVFVNDFKILIDLIIRECADLPQKDITRLHYLEVLEQALQ-SQLFPMTQMYRKRELCELLESLLDA 298          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: A0A3F2RPJ7_9STRA (DUF2013 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPJ7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.210e-6
Identity = 38/122 (31.15%), Postives = 64/122 (52.46%), Query Frame = 2
Query:  926 KILRELRDHPARSSVQEALLHIFNAEGFPANNDVVAA--HCIHFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVEMLENTLRA 1285
            ++L +++D   R  +  ALLH+ N+ G P   + V    + + F  D+L         +VND+K+++D+VIREC + P  D  R  YL LL ++   S      + +R  D+  +LE+ L A
Sbjct:  201 EVLHDMKD--GREHLGGALLHVINSCGCPCPKERVVHLWNSVQFFGDILADEIASALVFVNDLKVLIDLVIRECTDLPQEDPTRLRYLELLERILG-SPLYLQAQMYRKRDLWTLLESLLGA 319          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: UPI000DC69556 (NCK-interacting protein with SH3 domain n=3 Tax=Formicinae TaxID=7479 RepID=UPI000DC69556)

HSP 1 Score: 58.9 bits (141), Expect = 1.840e-5
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 2
Query:  890 LALNEQSFTGSHKILRELRDHPARSSVQEALLHIFNAEGFPA---NNDVVAAHCI-HFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVE 1261
            L+ N Q  T  + +L  LR+     +  E +L +FN E  P    +++    H +     D+     +   FY ND+K+++DI++R+  +    DK R +YL L R+V   SS+     RHR +D+++
Sbjct:  508 LSYNLQFTTSENMVLNALRERTVAKTFTEKILFLFNREEDPVRIFDHEPQPPHSVLKLFIDLFSNDAIASLFYTNDVKVLIDIILRQLFDMFPGDK-RRQYLELCRRVLRTSSYKE--HRHRSEDLLK 632          
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Match: E2A7B5_CAMFO (Transcription initiation factor TFIID subunit 5 n=1 Tax=Camponotus floridanus TaxID=104421 RepID=E2A7B5_CAMFO)

HSP 1 Score: 58.9 bits (141), Expect = 2.290e-5
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 2
Query:  890 LALNEQSFTGSHKILRELRDHPARSSVQEALLHIFNAEGFPA---NNDVVAAHCI-HFCQDVLEASGMEDFFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGERHRFDDIVE 1261
            L+ N Q  T  + +L  LR+     +  E +L +FN E  P    +++    H +     D+     +   FY ND+K+++DI++R+  +    DK R +YL L R+V   SS+     RHR +D+++
Sbjct: 1145 LSYNLQFTTSENMVLNALRERTVAKTFTEKILFLFNREEDPVRIFDHEPQPPHSVLKLFIDLFSNDAIASLFYTNDVKVLIDIILRQLFDMFPGDK-RRQYLELCRRVLRTSSYKE--HRHRSEDLLK 1269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7098.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JJY8_9PHAE5.090e-2251.38DUF2013 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G065_ECTSI1.620e-1651.65DUF2013 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2R5G9T3_9STRA3.130e-827.54NCK-interacting protein with SH3 domain n=1 Tax=Ho... [more]
A0A8K1CF65_PYTOL9.920e-832.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BR44_PYTIN9.750e-731.79DUF2013 domain-containing protein n=1 Tax=Pythium ... [more]
A0A812V7L5_SYMMI1.500e-634.25Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A484ED55_BRELC1.580e-631.15DUF2013 domain-containing protein n=1 Tax=Bremia l... [more]
A0A3F2RPJ7_9STRA4.210e-631.15DUF2013 domain-containing protein n=3 Tax=Phytopht... [more]
UPI000DC695561.840e-528.91NCK-interacting protein with SH3 domain n=3 Tax=Fo... [more]
E2A7B5_CAMFO2.290e-528.91Transcription initiation factor TFIID subunit 5 n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7098contigP-wetherbeei_contig7098:178..2393 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog42099.EPrPV00000022942
PFAMsDUF2013
Model size1611
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.54e-08
EggNOG OGs2A3ZS@1|root,2RY6D@2759|Eukaryota,1MBE5@121069|Pythiales
Ec32 ortholog descriptionDomain of unknown function DUF2013
Ec32 orthologEc-05_003970.1
Descriptionfunction. Source PGD
Cds size1272
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7098.1.1prot_P-wetherbeei_contig7098.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7098 365..2241 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186957.9008248-UTR-P-wetherbeei_contig7098:177..3641683186957.9008248-UTR-P-wetherbeei_contig7098:177..364Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7098 178..364 +
1683186957.9528408-UTR-P-wetherbeei_contig7098:2241..23931683186957.9528408-UTR-P-wetherbeei_contig7098:2241..2393Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7098 2242..2393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186957.9128065-CDS-P-wetherbeei_contig7098:364..11821683186957.9128065-CDS-P-wetherbeei_contig7098:364..1182Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7098 365..1182 +
1683186957.922015-CDS-P-wetherbeei_contig7098:1388..14401683186957.922015-CDS-P-wetherbeei_contig7098:1388..1440Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7098 1389..1440 +
1683186957.931657-CDS-P-wetherbeei_contig7098:1623..17151683186957.931657-CDS-P-wetherbeei_contig7098:1623..1715Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7098 1624..1715 +
1683186957.9425106-CDS-P-wetherbeei_contig7098:1931..22411683186957.9425106-CDS-P-wetherbeei_contig7098:1931..2241Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7098 1932..2241 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7098.1.1

>prot_P-wetherbeei_contig7098.1.1 ID=prot_P-wetherbeei_contig7098.1.1|Name=mRNA_P-wetherbeei_contig7098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=424bp
MDSLSRLDVRGDAPEEDTEKAACRLEALFELMQSDAGTEEGWATAVAEGL
PQRLMATLQASPMLPRPDSATVGAAESASMVRLNVACLGCLFMCASVDPS
CWTGIADAVPDAVAVLLERGTRALAHARVTYDDAATRGGDATADTDGADD
GADDGENSYDTAAVAAAATAEAAAQKQLVVLVFLEALLGATEAARLALPT
GRGRFNAAFLVRTVLDAVAGGGVEAVFLAATRVALALNEQSFTGSHKILR
ELRDHPARSSVQEALLHIFNAEGFPANNDVVAAHCIHFCQDVLEASGMED
FFYVNDIKMMVDIVIRECLNRPMADKLRHEYLGLLRQVAERSSWAAGGER
HRFDDIVEMLENTLRAVALAAAPAGATADGTSGTPPLEAGTAARGPPMDV
SEAVAVKVRKAAEDALAAVRQAK*
back to top

mRNA from alignment at P-wetherbeei_contig7098:178..2393+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7098.1.1 ID=mRNA_P-wetherbeei_contig7098.1.1|Name=mRNA_P-wetherbeei_contig7098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2216bp|location=Sequence derived from alignment at P-wetherbeei_contig7098:178..2393+ (Phaeothamnion wetherbeei SAG_119_79)
GGGAGGGGAAGGCCAAGCTTCAATTGGTAGCTCCAATCACTGGAAGCTTT CAAGCGAAAGAAAGCAGGCGTGCTCGTTAGGAATCGCTGGCCCTGGAAGA CATTTTTTGGGGCATTTGTTTGGACAGTCAATCCAGCGTCTTGGCAATCC TGGCTGGCGGCTGAACGTACCTTGGAACAAGAAAACAATGGATTCATTAT CGAGGCTCGACGTCCGCGGCGACGCCCCGGAGGAGGATACGGAGAAGGCT GCATGCAGGCTCGAAGCGCTGTTCGAGCTCATGCAGAGCGACGCGGGGAC GGAGGAAGGTTGGGCAACGGCGGTGGCAGAGGGGTTGCCGCAAAGGCTCA TGGCAACTCTTCAGGCATCGCCCATGCTGCCGCGGCCCGATTCAGCGACA GTGGGAGCTGCTGAGAGCGCGTCGATGGTCAGGCTCAACGTAGCATGCTT GGGGTGTCTTTTTATGTGCGCTTCCGTCGACCCGTCCTGCTGGACTGGCA TTGCCGATGCGGTGCCCGATGCCGTCGCCGTGCTTCTGGAACGCGGAACG CGAGCGCTCGCCCACGCACGCGTGACGTACGACGATGCCGCGACACGAGG CGGAGACGCCACCGCTGACACTGACGGTGCTGACGACGGCGCCGACGACG GTGAGAATTCCTACGACACAGCCGCGGTCGCCGCCGCCGCGACCGCCGAA GCTGCCGCGCAGAAGCAGCTCGTCGTCCTCGTCTTTTTAGAGGCGCTCCT CGGCGCCACTGAGGCGGCGCGCCTCGCGCTGCCCACCGGGCGCGGCCGAT TCAACGCGGCATTCCTCGTCCGGACGGTGTTGGACGCCGTCGCCGGCGGC GGCGTGGAGGCAGTCTTCCTGGCGGCAACGCGTGTGGCGCTGGCGCTCAA CGAACAGTCGTTCACGGGGAGCCACAAGATCCTGCGGGAGTTGCGGGACC ACCCGGCGCGCTCGAGCGTGCAGGAAGCCCTGCTGCACATCTTCAACGCC GAGGGGTGAGTCGACGTGGCGAGGATTCATTTGTCGAAATGCGCTTGGCG TCTGCCGCATGTGCTTATTCTTTTGGTAAGGTTTAGAGAGCATGGGAGCA GGCGGTTGCACTGTGAGCGTTTACAATGCCTCGGTCTTGTGACGTGTTAA ATTCCTCCGGATTCGTACCATCACTGCATGCTCCCGATGTTCTGCATCGC TGCACCACCAGATTTCCGGCCAACAACGATGTGGTGGCGGCGCATTGCAT TCACTTTTGCCAGGTACGAAGAACCTCCTGGAGAGCCACTCCGTGCCTGA ATTGAGATCTTATTGGCAGAGTGAGGTCACATAGTGCCTGGCTGATGATA CTCTATTGATGCCGGGGAATTGGAGATGCCCGAGAACTGTGAATTGCCCA TGCTCACTTCCTTTCCTTTCTTTTTTGTATTATTAATCACCTGCAGGACG TGCTAGAGGCAAGCGGGATGGAAGACTTCTTTTACGTGAATGACATCAAG ATGATGGTCGACATTGTCATCCGCGAGTGCCTCAACAGGTGAGAAACAGC GGTGACAACGTGCCCGTTTTGGGAGGCGGGGGGTTGGGTTCAACCCTGTT GCTGTGACGTGATTGGATCCGGCACCTTTGAAAGCTCAGGAGAATGGTGG GAGTCAGCAAGGCTTAGCGAAGAAAGGCGTGAAAATCGAATTGAAGGAAA GAAAAACGACGATAAAAACCAGACCTCCTGGTTTTTATTCCTCTGTTCCC GCAGGCCAATGGCGGATAAGTTGCGGCACGAATACCTCGGGCTGCTCCGA CAGGTCGCTGAGCGCTCCAGCTGGGCAGCCGGCGGTGAGCGCCATCGCTT TGACGACATCGTTGAGATGCTCGAAAACACGCTCCGTGCCGTGGCGCTGG CGGCGGCTCCGGCGGGAGCGACGGCGGACGGGACAAGTGGGACGCCGCCG TTAGAGGCGGGAACGGCGGCCAGAGGTCCGCCCATGGACGTCAGTGAGGC GGTGGCTGTGAAGGTCCGGAAAGCGGCAGAGGACGCCCTAGCGGCGGTCC GACAGGCAAAGTGAAGATGTTCATTCCACGGCTTTTAAAGAAGGGGAAGA GTGGGGATTTTTGTAGATAGAAGCAGGTTCGGGGAGTGGAGATTCGGACA TTTTTGGCAAATAGAAACAGCAGGCGGTCTGGCGACCTGCTGCAACACAC AAATCGATGACAAACG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7098:178..2393+

>mRNA_P-wetherbeei_contig7098.1.1 ID=mRNA_P-wetherbeei_contig7098.1.1|Name=mRNA_P-wetherbeei_contig7098.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1272bp|location=Sequence derived from alignment at P-wetherbeei_contig7098:178..2393+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATTCATTATCGAGGCTCGACGTCCGCGGCGACGCCCCGGAGGAGGA
TACGGAGAAGGCTGCATGCAGGCTCGAAGCGCTGTTCGAGCTCATGCAGA
GCGACGCGGGGACGGAGGAAGGTTGGGCAACGGCGGTGGCAGAGGGGTTG
CCGCAAAGGCTCATGGCAACTCTTCAGGCATCGCCCATGCTGCCGCGGCC
CGATTCAGCGACAGTGGGAGCTGCTGAGAGCGCGTCGATGGTCAGGCTCA
ACGTAGCATGCTTGGGGTGTCTTTTTATGTGCGCTTCCGTCGACCCGTCC
TGCTGGACTGGCATTGCCGATGCGGTGCCCGATGCCGTCGCCGTGCTTCT
GGAACGCGGAACGCGAGCGCTCGCCCACGCACGCGTGACGTACGACGATG
CCGCGACACGAGGCGGAGACGCCACCGCTGACACTGACGGTGCTGACGAC
GGCGCCGACGACGGTGAGAATTCCTACGACACAGCCGCGGTCGCCGCCGC
CGCGACCGCCGAAGCTGCCGCGCAGAAGCAGCTCGTCGTCCTCGTCTTTT
TAGAGGCGCTCCTCGGCGCCACTGAGGCGGCGCGCCTCGCGCTGCCCACC
GGGCGCGGCCGATTCAACGCGGCATTCCTCGTCCGGACGGTGTTGGACGC
CGTCGCCGGCGGCGGCGTGGAGGCAGTCTTCCTGGCGGCAACGCGTGTGG
CGCTGGCGCTCAACGAACAGTCGTTCACGGGGAGCCACAAGATCCTGCGG
GAGTTGCGGGACCACCCGGCGCGCTCGAGCGTGCAGGAAGCCCTGCTGCA
CATCTTCAACGCCGAGGGATTTCCGGCCAACAACGATGTGGTGGCGGCGC
ATTGCATTCACTTTTGCCAGGACGTGCTAGAGGCAAGCGGGATGGAAGAC
TTCTTTTACGTGAATGACATCAAGATGATGGTCGACATTGTCATCCGCGA
GTGCCTCAACAGGCCAATGGCGGATAAGTTGCGGCACGAATACCTCGGGC
TGCTCCGACAGGTCGCTGAGCGCTCCAGCTGGGCAGCCGGCGGTGAGCGC
CATCGCTTTGACGACATCGTTGAGATGCTCGAAAACACGCTCCGTGCCGT
GGCGCTGGCGGCGGCTCCGGCGGGAGCGACGGCGGACGGGACAAGTGGGA
CGCCGCCGTTAGAGGCGGGAACGGCGGCCAGAGGTCCGCCCATGGACGTC
AGTGAGGCGGTGGCTGTGAAGGTCCGGAAAGCGGCAGAGGACGCCCTAGC
GGCGGTCCGACAGGCAAAGTGA
back to top