mRNA_P-wetherbeei_contig709.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig709.3.1
Unique NamemRNA_P-wetherbeei_contig709.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI)

HSP 1 Score: 607 bits (1566), Expect = 1.430e-208
Identity = 340/611 (55.65%), Postives = 420/611 (68.74%), Query Frame = 1
Query:  337 IMAPGADATAGNDKASPVAAANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRA-RQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIG------RREAAAVETDYERFLQQLEADKEMRQQVNLYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLEELLDDLMLDXTSXXXXXXXXXXXXXXXXXXXXXXVFAAGAAPAPSQVWQGFGEDDPDL 2148
            ++AP  D  A      P     ++PT+LCCMC + I PNPT MC  CI +Q+DITEGI  NLT++QCRGC+R+LRP WV   LESREL+A+CLRKISGLK VKL+DA+WIWTEPHSRRLK++LTVQKEV NGA++QQA VV FVVRNQQCDTC A+FT+NTW AVVQVRQRVDHKRTFFYLEQLILKHNAH+ C  ++T +DGMDF+FTE+S +A+FVDFLE VVP KVKHSKKL+SADNHSN FNF +TYLVT+ PVCK+DLVLLPKRLA  LG++ RL + QR+T A+  VDPLTAQTA+++ ++YWR+EFP LL S RL  +V LG EPLPE   P+AP R  R R+AR A V LARE DLG ND + TA +HLGH++RAGDT+L YD+++ANL E  G+A     G  +  +PDVV+V+K Y                         R W+L ELEK+  +         +R+ AA E DYERFLQQLE+DK+MR+QVNLY+            +G+AA  A   G  AME  E     E D EEVRL+ELLD + LD  +                      +F AGAAPAP+   +   +DDP+L
Sbjct:    3 VVAPPTDGLAAPPPPEPE---KQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPE--GEAT----GDLKGRLPDVVLVRKVY-------------PRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYK------------QGLAAKPAAADGDGAMEDVE-----EMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASAS-------IFEAGAAPAPNA--ELLLDDDPEL 565          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA)

HSP 1 Score: 590 bits (1520), Expect = 4.980e-202
Identity = 332/596 (55.70%), Postives = 405/596 (67.95%), Query Frame = 1
Query:  373 DKASPVAAANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRA---RQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLEELLDDLMLDXTSXXXXXXXXXXXXXXXXXXXXXXVFAAGAAPAPSQVWQGFG-EDDPDL 2148
            D   P +A   L TV CC+C   I+PNPT MC QCI +Q+DITEGI    TI+QCRGC R+L+P WV A LESREL+AICLRK+SGL  VKL+DA+W+WTE HSRRLKL+LTVQKEV NGAI+QQA +VEF VRNQQC  CQAS+TNNTWKAVVQ+RQRVDHKRTFFYLEQLILKHNAH N   V+T +DGMDFF+ ER+QAA+ + FLE+V+P ++K+SKKLISADNHSNT+NF +TYLVTVAPVCK+DLVLLP RLA  LG   RL +VQR+++ + LVDP+TAQTA+++ D Y RHEF  LL S RL  FV LG EPLP   LP+AP  A   R RRAR A VT+ARE DLG+ND Q TA +HLGHL++AGDT+L YD+ +ANL ED    L       +TA+PDVV+V+K Y   +G                   +RAWRL  LEK+   E+ +R+A A + DYERF+QQLEADKEMR+QVNL++  A GA                    A +TG     +E D E++R+EELLDD+ LD                         VF+AG AP  +        EDD DL
Sbjct:    5 DVRPPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLP---LPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRGL-------KTALPDVVLVRKVYTSGAG-------------------KRAWRLEALEKDREAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGA--------------------AAKTGGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGDAQ-------------VFSAGEAPGVNFAALALDDEDDDDL 538          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 480 bits (1235), Expect = 2.500e-159
Identity = 246/477 (51.57%), Postives = 320/477 (67.09%), Query Frame = 1
Query:  406 LPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
            LP +LCCMC + I+ N   MC  C+  Q+D+TEGI K + ++QCRGC ++ RPPWVAA+LESRELLAICL+KISGL  VKL+DA W+WTEPHS+RLKL+LTVQKEV NGAI+QQ+FVV F+VRNQQCD CQASFTNN+WKAVVQVRQ+VDHKRTFFYLEQLILKH  H     +E+  DG+DFFF ER+ A +FVDFL   VP+K+K +KKLISADNHSNT N+ FTY V +A VCK+DLV LP +LA +LG++  LC+V +VT ++H++DP T Q AE+  D+YWR+ F  L  S +L  +  L + PL    L   P R   R+ R A + + R  D G ND +   TTHLG L+  GDT + YDL+ +   +     L  AG      +PDV++V+K +                       R R W+L+ +E  E    + + E    E DY+ FL +LE DKEMR ++N+Y+
Sbjct:    9 LPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRT-NRKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAG----ITLPDVILVRKQF-----------------LRRVQKRSRNWKLKNIEGIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYK 463          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA)

HSP 1 Score: 478 bits (1230), Expect = 6.660e-158
Identity = 270/545 (49.54%), Postives = 361/545 (66.24%), Query Frame = 1
Query:  388 VAAANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWR------HEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIGR-REAAAVETD---YERFLQQLEADKEMRQQVNLYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLEELLDDL 1992
            VAA   L TVLCC CG  I  NP+ MCA C+  + DITEGI   L++++CRGC+R+LRP WV A+LES+EL+A+CLRKI GL  V L+DA WIWTEPHS RLK+++T+QKEV  GAI+QQ+FVVEFV+RNQQC+ CQ  +T+ TWKAVVQVRQRVDHKRTF+YLEQL+LKHN H+ C  +++ RDGMDF+F E+++A +F DFL+  +PV++K++KKLIS+DNHSN FNF FT+L  + P+CK+DL +LP RLA  L  +  L LV+RVT  +HLVDPLT   A   +D Y +        F  ++ + RL  ++ LG EP+  +    A  +  + + R A V +AR  DLG ND +    +HLGH++R GDT+L YD++AANL +DA  A          A+P+VV+V+K YG +S                   ++R W LR+LE + VEE  R R+   +E+D   YERF+QQLE DKEMR+ VNLYRR A       G R  AAA+        +E  E G   E D E+V ++ELL+ L
Sbjct:   10 VAATPGLATVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANL-DDADVARIE----KRRALPEVVLVRKLYGVES-------------------QRRGWTLRKLEYDAVEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREA-------GPRKAAAAAV-----DPLEEDE-GEEDEMDEEQVHIDELLEGL 517          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 1.280e-153
Identity = 239/481 (49.69%), Postives = 323/481 (67.15%), Query Frame = 1
Query:  394 AANRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEKEEVEEIGRREAAAV-ETDYERFLQQLEADKEMRQQVNLYR 1833
            A + LP +LCC+C + I+ N   MC  C+  Q+D+TEGI K + ++QCRGC ++ RP WV+A+LESRELLAICL+KI+GL  VKL+DA WIWTEPHS+RLKL+LTVQKEV NGAI+QQ+F+V F+VRNQQCD CQASFTN++WKAVVQVRQ+V+HKRTFFYLEQLILKH  H     +E+  DG+DFFF ER+ A +FVDFL+  VP+ +K +KKLISADNHSNT N+ FTY V +APVCK+DLV LP +LA +LG++  LCLV +VT ++H++DP T Q AE+  ++YWR+ F  L  S +L  +  L + P+ E  +    P    R+ R A + + R  D G ND +    +HLG L+  GDT + YDL  +   +     L  AG      +PDVV+V+K +                       RQR W+L+ +E   +E +G+++     + DYE FL  LE DKEMR ++N+Y+
Sbjct:    4 AEHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPM-EIPMKGGVPVRTNRKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAG----ITLPDVVLVRKQF-----------------LRRVQKRQRKWKLKTIEG--IESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYK 460          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 465 bits (1197), Expect = 1.370e-153
Identity = 248/481 (51.56%), Postives = 326/481 (67.78%), Query Frame = 1
Query:  400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQ--RRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
            +++PT+LCCMC   I  N    C  C+ SQ+D+TEGI K + I+QCRGC R+ RPPWVAA+LESRELLA+CL+KI+ L  VKLIDA WIWTEPHSRRLKL+LTVQKEV +  I+QQ+FVV FVVRNQQCD CQASF N +W+AVVQVRQRVDHKRTFF+LEQLILKH AH     +E+  DG+DFFF+ER+ A +FVDFL+  VP+KVK +KKLISADNHSNT N+ FTY V +APVCK+DLVLLP +LA  LG+M  LCLVQ VT ++H+VDP T Q AE+ +++YWR+ F  L     +  F  L + P+    +P+   RA +  R+ R A + + R+ D G ND +    +HLG L+  GD+   YDLT+A   +     L  +G      +PDVV+V+K +                       R R W+L+++E  E+   + + + +  E DYE+FL +LE DKE+R Q+NLY+
Sbjct:    6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPMA---IPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSG----MTLPDVVLVKKMF-----------------PRRIQKRARNWKLKKMEGVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYK 462          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A485KPH2_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPH2_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 2.060e-153
Identity = 238/477 (49.90%), Postives = 319/477 (66.88%), Query Frame = 1
Query:  406 LPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
            LP +LCC+C + I+ N   MC  C+  Q+D+TEGI K + I+QCRGC ++ RPPWV+ADLESRELLAICL+KI+GL  VKL+DA WIWTEPHS+RLKL+LTVQKEV NGAI+QQ+F+V F+VRNQQCD CQASFTN++WKAVVQVRQ+V+HKRTFF+LEQLILKH  H     +E+  DG+DFFF ER+ A +FVDFL+  VP+ +K +KKLISADNHSNT N+ FTY+V +APVCK+DLV LP +LA +LG++  LCLV +VT ++H++DP T Q AE+  D+YWR  F  L  S +L  +  L + P+ E  +    P    R+ R A + + R  D G ND +    +HLG L+  GDT + YDL+ +   +     L  AG      +PDV++V+K +                       R R W+L+ +E  E    + + +    + DYE FL  LE DKEMR ++N+Y+
Sbjct:    9 LPNILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIIHQCRGCLKWSRPPWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYMVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRSPFKALCSSKKLTEYTVLDSTPM-EIPVKGGVPVRTNRKTRLAELEVVRNVDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAG----ITLPDVILVRKQF-----------------LRRVQKRSRKWKLKTIEGIEPAVPLKKADQTKQDLDYEHFLNDLEEDKEMRAKINIYK 463          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 5.820e-153
Identity = 239/479 (49.90%), Postives = 320/479 (66.81%), Query Frame = 1
Query:  400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
            + LP +LCC+C + I+ N   MC  C+  Q+D+TEGI K + ++QCRGC ++ RP WV+ADLESRELLAICL+KI+GL  VKL+DA WIWTEPHS+RLKL+LTVQKEV NGAI+QQ+F+V F+VRNQQCD CQASFTN++WKAVVQVRQ+V+HKRTFF+LEQLILKH  H     +E+  DG+DFFF ER+ A +FVDFL+  VP+ +K +KKLISADNHSNT N+ FTY V +APVCK+DLV LP +LA +LG++  LCLV +VT ++H++DP T Q AE+  D+YWR+ F  L  S +L  +  L + PL  +     P R   R+ R A V + R  D G ND +    THLG L+  GDT + YDL+ +   +     L  AG     ++PDVV+V+K +                       R R W+L+ +E  E    + + +    + DYE FL  LE DK+MR ++N+Y+
Sbjct:    7 HELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTKGGIPVRT-NRKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAG----ISLPDVVLVRKQF-----------------LRRVQKRSRKWKLKTIEGIEPTMPLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYK 463          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: A0A0P1APN2_PLAHL (60S ribosomal export protein NMD3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APN2_PLAHL)

HSP 1 Score: 463 bits (1191), Expect = 1.050e-152
Identity = 244/481 (50.73%), Postives = 329/481 (68.40%), Query Frame = 1
Query:  400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQ--RRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
            + +PT+LCCMC   I  N    C  C+ SQ+D+TEGI K + I+QCRGC R+ RPPWVAADLESRELLA+CL+KI+ L  VKLIDA W+WTEPHSRRLKL+LTVQKEV +  I+QQAFVV FVVRNQQCD CQASF N +W+AVVQVRQRVDHKRTFF+LEQLILKH AH     +E+  DG+DFFF+ER+ A +FVDFL+  VP+KVK +KKLISADNHSNT N+ FTY V +APVCK+DLV+LP +LA  LG++  LCL+Q VT ++H+VDP T Q AE+ +++YWR+ F  L     +++F  L + P+    +P+   RA +  R+ R A + + R+ D G ND +    +HLG ++ AGD+   YDLT+A   +     L  +G     ++PDVV+V+K +                       R R W+L+++E  E+   + + + +  E DYE+FL +LE +K++R Q+NLY+
Sbjct:    3 SHMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAADLESRELLALCLKKITNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQAFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPVKLARMLGNISCLCLIQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFHALRSIKAMSNFTILDSSPMA---IPSGGGRAIRVSRKTRLADLEIVRDVDFGVNDTRFRTVSHLGMILHAGDSARGYDLTSAVFNDADLVPLVQSG----ISMPDVVLVKKTF-----------------PSRIQKRTRNWKLKKIEGVEQAGTVRKTDLSKEEQDYEQFLDELEENKDLRSQINLYK 459          
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 463 bits (1191), Expect = 1.160e-152
Identity = 247/481 (51.35%), Postives = 325/481 (67.57%), Query Frame = 1
Query:  400 NRLPTVLCCMCGIGIRPNPTGMCAQCIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKISGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVRNQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGKVETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFNFSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPLTAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRARQ--RRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANLAEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGXXXXXXXXXXXXXXXXXXRQRAWRLRELEK-EEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVNLYR 1833
            +++PT+LCCMC   I  N    C  C+ SQ+D+TEGI K + I+QCRGC R+ RPPWVAA+LESRELLA+CL+KI+ L  VKLIDA WIWTEPHSRRLKL+LTVQKEV +  I+QQ+FVV FVVRNQQCD CQASF N +W+AVVQVRQRVDHKRTFF+LEQLILKH AH     +E+  DG+DFFF+ER+ A +FVDFL+  VP+KVK +KKLISADNHSNT N+ FTY V +APVCK+DLVLLP +LA  LG+M  LCLVQ VT ++H+VDP T Q AE+ +++YWR+ F  L     +     L + P+    +P+   RA +  R+ R A + + R+ D G ND +    +HLG L+  GD+   YDLT+A   +     L  +G      +PDVV+V+K +                       R R W+L+++E  E+   + + + +  E DYE+F+ +LE DKEMR Q+NLY+
Sbjct:    6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPMA---IPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSG----LTLPDVVLVKKMF-----------------PRRIQKRARNWKLKKMEGVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYK 462          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig709.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ8_ECTSI1.430e-20855.6560S ribosomal export protein NMD3 n=2 Tax=Ectocarp... [more]
A0A835ZB23_9STRA4.980e-20255.7060S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
T0RPV6_SAPDV2.500e-15951.5760S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
A0A7S2WJE1_9STRA6.660e-15849.5460S ribosomal export protein NMD3 n=1 Tax=Rhizochr... [more]
A0A6G0XWA3_9STRA1.280e-15349.6960S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
W2I7I2_PHYPR1.370e-15351.5660S ribosomal export protein NMD3 n=9 Tax=Peronosp... [more]
A0A485KPH2_9STRA2.060e-15349.9060S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
A0A024UHG0_9STRA5.820e-15349.9060S ribosomal export protein NMD3 n=7 Tax=Aphanomy... [more]
A0A0P1APN2_PLAHL1.050e-15250.7360S ribosomal export protein NMD3 n=1 Tax=Plasmopa... [more]
D0MSQ0_PHYIT1.160e-15251.3560S ribosomal export protein NMD3 n=18 Tax=Peronos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig709contigP-wetherbeei_contig709:4464..7964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LNZ8
PFAMsNMD3
Model size2199
Max annot lvl2759|Eukaryota
KEGG koko:K07562
KEGG Pathwayko03008,ko03013,map03008,map03013
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.22e-210
EggNOG OGsCOG1499@1|root,KOG2613@2759|Eukaryota
Ec32 ortholog descriptionNMD3
Ec32 orthologEc-01_000570.1
Descriptionribosomal large subunit binding
Cds size1827
COG categoryJ
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig709.3.1prot_P-wetherbeei_contig709.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig709 4788..7916 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186957.3405612-UTR-P-wetherbeei_contig709:4463..47871683186957.3405612-UTR-P-wetherbeei_contig709:4463..4787Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig709 4464..4787 +
1683186957.4179528-UTR-P-wetherbeei_contig709:7916..79641683186957.4179528-UTR-P-wetherbeei_contig709:7916..7964Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig709 7917..7964 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186957.3533742-CDS-P-wetherbeei_contig709:4787..49671683186957.3533742-CDS-P-wetherbeei_contig709:4787..4967Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig709 4788..4967 +
1683186957.3677123-CDS-P-wetherbeei_contig709:5119..55451683186957.3677123-CDS-P-wetherbeei_contig709:5119..5545Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig709 5120..5545 +
1683186957.3855417-CDS-P-wetherbeei_contig709:6344..64341683186957.3855417-CDS-P-wetherbeei_contig709:6344..6434Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig709 6345..6434 +
1683186957.4009569-CDS-P-wetherbeei_contig709:6785..79161683186957.4009569-CDS-P-wetherbeei_contig709:6785..7916Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig709 6786..7916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig709.3.1

>prot_P-wetherbeei_contig709.3.1 ID=prot_P-wetherbeei_contig709.3.1|Name=mRNA_P-wetherbeei_contig709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=609bp
MATMIMAPGADATAGNDKASPVAAANRLPTVLCCMCGIGIRPNPTGMCAQ
CIHSQIDITEGIGKNLTIYQCRGCKRFLRPPWVAADLESRELLAICLRKI
SGLKNVKLIDATWIWTEPHSRRLKLRLTVQKEVANGAIIQQAFVVEFVVR
NQQCDTCQASFTNNTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHANCGK
VETLRDGMDFFFTERSQAAKFVDFLENVVPVKVKHSKKLISADNHSNTFN
FSFTYLVTVAPVCKNDLVLLPKRLAAELGSMPRLCLVQRVTDALHLVDPL
TAQTAELSADRYWRHEFPPLLGSGRLASFVALGAEPLPEARLPAAPPRAR
QRRARRAAVTLAREDDLGSNDRQSTATTHLGHLIRAGDTLLCYDLTAANL
AEDAGDALAGAGGGSETAVPDVVVVQKCYGGDSGDGGGSSGGNGGGSGGI
SGRQRAWRLRELEKEEVEEIGRREAAAVETDYERFLQQLEADKEMRQQVN
LYRRPAAGAGTAFGTRGVAAASALGTGASAMETGEDGGGSEADVEEVRLE
ELLDDLMLDDTSAPPDDASAAASAASAAADGAAAVFAAGAAPAPSQVWQG
FGEDDPDL*
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mRNA from alignment at P-wetherbeei_contig709:4464..7964+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig709.3.1 ID=mRNA_P-wetherbeei_contig709.3.1|Name=mRNA_P-wetherbeei_contig709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3501bp|location=Sequence derived from alignment at P-wetherbeei_contig709:4464..7964+ (Phaeothamnion wetherbeei SAG_119_79)
GCCTTCACTTCGACTTTCAGACGCTGGCATTCCAAAGCAAGTTTGCATAC CTTCTAAGACTCACAGCGTAGGCGATAAAGGCAGGGAACGAAGAAGCGAT CGAATCTGCGCTTGCAGAGGATTGTTTTTGTGTGGAGGATAGGGAAGGCC GTCCCGCGCTTCTTTCTCTCACAAAGAGCAGATTAAGCAGCTGTCAAGCT CTTCTTCTACTGGTGGCATCGCCCATTTCTAAACGTAAGAGGAGAGAGGA GAAGAAGAAACTGTAGAGTGAAGAGCGAAACTTTCATCTCTCCCCTCCCT GCGGCCTTCAGTTCGCGTTCGCCGATGGCGACGATGATCATGGCGCCGGG AGCCGACGCCACCGCAGGCAACGACAAGGCTTCCCCCGTGGCGGCCGCGA ACCGGCTCCCAACGGTGCTGTGCTGCATGTGTGGCATCGGCATCCGCCCG AACCCGACGGGAATGTGTGCGCAGTGCATCCACTCCCAGATCGACATCAC GGAGGTGAGAAAAAGTAAAGCTTGGCCATCCTTTCGCCGAAAAGTTCACC TCGCGTTAAAGGCTTTTCCGAACGTTTGATGAGAGCTTTACGCCGCTTTC TCGTAAATCTGGGCTCTATGTGGCCCTTCTCCCGCACCTCTTCCTCTCAA CAACAGGGAATAGGGAAAAACCTCACAATCTATCAGTGCCGCGGCTGCAA GCGCTTCCTGCGACCGCCGTGGGTCGCCGCCGACCTCGAGTCGCGCGAGC TTCTCGCCATCTGTCTTCGCAAGATCAGTGGCCTCAAGAACGTCAAGCTG ATCGACGCCACCTGGATCTGGACGGAGCCGCACTCGCGGCGCCTCAAGCT GCGGCTGACCGTTCAAAAAGAAGTCGCGAACGGCGCTATCATCCAACAGG CCTTCGTCGTCGAGTTCGTGGTGCGCAACCAGCAGTGCGACACGTGCCAG GCGTCGTTTACGAACAACACGTGGAAGGCCGTCGTGCAGGTGCGGCAGCG CGTCGACCACAAGCGCACCTTCTTCTACCTCGAGCAGCTGATTCTGAAGC ACAACGCCCACGCCAACTGCGGCAAGGTCGAGGTAAGTTCTAACAAAAAT AACAACAGTTGAATTGAGTTTGCCGATTTGTTGGTTGACGGAGGGAGTCT GTTACTTTGACAGGGGATGTAAAGTTGCTGGTGTTATGTATGTGGCTTTT CTATACGATGCAAGTTTGATCTAAGTATTCTGTGTAGAAAGCGACCGGTC ATGGTTGCATAGGCGCTGCCAGTAGGTATGCAGTAAAGAGGAGCGGTTCG GCGCGCGACATCGAGGGTTTATTTTGCATCTTTTCTCTTTTTTCATCTCT GGGCTCTCATGAGGCGTTGCTCTCTGCGCGTTTAAAAAACAATGCCGCTT CAAAAAGAAGCGGCGGCACGCCGCGCGGGGGGTGTCATAGAGCCCACATA TCATGCAAGTAGCAAAGCCAGTCTTAAAAACCTATCCCGCTGAGGCTTCG GCCCATGTGGAAATAGACCCTGTCGGCTGGTACATTTCCTTCATGTGAAG TTTTTAAACTTGGTATTTCTTATAGCTTTGTATCTTGGTTTTTTATTCCG GTGCGTCAGGCACCTGTGTGTCACGATGCGGCTTGGTGCAAGACCTGCCG GCGCTTGTATCTGACGATTTACCCTTTTCTTGACTCCCGTTGGACCGATA CCTGTGTTCCTCTGCTTTATTCTTTTTTTACGCGCGTTCCACTTCGGCCC TGCTGTCGACGCGACCGGCGGTTGTGGCTGGCCGTTGCGCCTGCCGGTTT TGTTGCCTCGGCGGCGGGGTGGACACCCTGGCGCTTTTTGCCATCATCGC CGTGGCGGCTGGCTGCTTGGGGCGGGGGCAGACGCTACGCGACGGCATGG ACTTCTTCTTCACGGAGCGGAGCCAGGCGGCGAAGTTCGTCGACTTTCTT GAGAATGTTGTGCCCGTTAAGGTGAGAACTGGAAAGGGACAAAGCTTCGC TCGTTTGTCTAAGTCCGACAGAGGTTTTCTGCTTGCCTTTTGCTGGTTGC CGCGTTCCTGGAGCTTTTTTGGACTGCAAAGCTGTTACTTGCAAAGGTGG CCTGCACCTCTTTGTTGGAACAGACGGTCGGCTTGTGTCCTCATGCATGC TCTCAGTCCCGACGAAGGGTGTTCTCGCGAGAAGCGCTACTGGTGCACTG CCGCTGCAGCGGCGGTTGCCAGCATCCCATATGACCTTCCCTGTTCTGTC ATTTCTTACCGGCCCCTTGCTGAACGCTTATTTTCCGATTCGAAAACCCG TCGAAATAAAAACATAAAACAGGTGAAGCACAGCAAAAAGCTCATTTCGG CGGACAACCACTCCAACACGTTCAACTTCTCCTTCACGTACCTTGTCACC GTTGCCCCCGTTTGCAAAAACGACCTCGTGCTCCTGCCCAAACGACTCGC CGCAGAGCTTGGCAGCATGCCGCGCCTCTGCCTCGTGCAGCGCGTCACGG ACGCGCTCCACCTGGTGGACCCACTCACGGCGCAGACGGCAGAGCTGTCG GCCGACCGCTACTGGCGGCATGAGTTCCCCCCGCTGCTCGGCAGCGGCCG GCTGGCGTCTTTCGTGGCGCTAGGTGCCGAACCGCTGCCGGAGGCGCGGC TGCCGGCGGCACCGCCGCGCGCGCGGCAGCGGCGGGCCCGCCGGGCGGCA GTGACACTTGCCCGCGAAGACGACCTGGGCAGCAACGACCGGCAGAGCAC GGCGACGACGCACCTGGGCCACCTGATCCGTGCGGGCGACACGCTGCTCT GCTACGACCTAACGGCGGCCAATCTGGCCGAGGATGCCGGCGACGCGCTG GCGGGTGCTGGGGGTGGGTCCGAAACTGCTGTGCCCGACGTCGTCGTCGT GCAAAAGTGCTACGGCGGCGATTCTGGCGATGGCGGCGGTTCTAGCGGCG GTAACGGCGGCGGTAGCGGTGGCATTTCCGGGCGGCAGAGGGCGTGGCGG CTGCGGGAGCTGGAGAAGGAGGAGGTGGAAGAGATTGGGCGGCGCGAAGC GGCGGCGGTCGAGACGGACTACGAACGTTTCCTGCAACAGCTCGAGGCCG ACAAGGAGATGCGGCAGCAGGTCAACCTCTACCGGCGGCCCGCTGCAGGT GCAGGCACCGCGTTTGGGACACGTGGAGTGGCAGCGGCATCAGCATTAGG GACAGGAGCGTCCGCTATGGAGACTGGCGAGGACGGCGGCGGCAGCGAGG CGGACGTGGAGGAGGTACGGCTGGAAGAGCTGCTGGATGATTTGATGCTT GACGACACGTCGGCACCGCCGGACGACGCTTCGGCGGCCGCTTCTGCTGC TTCGGCGGCGGCAGACGGCGCCGCCGCGGTGTTTGCGGCGGGGGCAGCGC CGGCGCCATCGCAGGTGTGGCAAGGGTTCGGCGAGGATGATCCGGATTTG TGATGAAAACAGCACGACAATAATTAACAAGGAAGGAGGCATCAACATAC C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig709:4464..7964+

>mRNA_P-wetherbeei_contig709.3.1 ID=mRNA_P-wetherbeei_contig709.3.1|Name=mRNA_P-wetherbeei_contig709.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1827bp|location=Sequence derived from alignment at P-wetherbeei_contig709:4464..7964+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACGATGATCATGGCGCCGGGAGCCGACGCCACCGCAGGCAACGA
CAAGGCTTCCCCCGTGGCGGCCGCGAACCGGCTCCCAACGGTGCTGTGCT
GCATGTGTGGCATCGGCATCCGCCCGAACCCGACGGGAATGTGTGCGCAG
TGCATCCACTCCCAGATCGACATCACGGAGGGAATAGGGAAAAACCTCAC
AATCTATCAGTGCCGCGGCTGCAAGCGCTTCCTGCGACCGCCGTGGGTCG
CCGCCGACCTCGAGTCGCGCGAGCTTCTCGCCATCTGTCTTCGCAAGATC
AGTGGCCTCAAGAACGTCAAGCTGATCGACGCCACCTGGATCTGGACGGA
GCCGCACTCGCGGCGCCTCAAGCTGCGGCTGACCGTTCAAAAAGAAGTCG
CGAACGGCGCTATCATCCAACAGGCCTTCGTCGTCGAGTTCGTGGTGCGC
AACCAGCAGTGCGACACGTGCCAGGCGTCGTTTACGAACAACACGTGGAA
GGCCGTCGTGCAGGTGCGGCAGCGCGTCGACCACAAGCGCACCTTCTTCT
ACCTCGAGCAGCTGATTCTGAAGCACAACGCCCACGCCAACTGCGGCAAG
GTCGAGACGCTACGCGACGGCATGGACTTCTTCTTCACGGAGCGGAGCCA
GGCGGCGAAGTTCGTCGACTTTCTTGAGAATGTTGTGCCCGTTAAGGTGA
AGCACAGCAAAAAGCTCATTTCGGCGGACAACCACTCCAACACGTTCAAC
TTCTCCTTCACGTACCTTGTCACCGTTGCCCCCGTTTGCAAAAACGACCT
CGTGCTCCTGCCCAAACGACTCGCCGCAGAGCTTGGCAGCATGCCGCGCC
TCTGCCTCGTGCAGCGCGTCACGGACGCGCTCCACCTGGTGGACCCACTC
ACGGCGCAGACGGCAGAGCTGTCGGCCGACCGCTACTGGCGGCATGAGTT
CCCCCCGCTGCTCGGCAGCGGCCGGCTGGCGTCTTTCGTGGCGCTAGGTG
CCGAACCGCTGCCGGAGGCGCGGCTGCCGGCGGCACCGCCGCGCGCGCGG
CAGCGGCGGGCCCGCCGGGCGGCAGTGACACTTGCCCGCGAAGACGACCT
GGGCAGCAACGACCGGCAGAGCACGGCGACGACGCACCTGGGCCACCTGA
TCCGTGCGGGCGACACGCTGCTCTGCTACGACCTAACGGCGGCCAATCTG
GCCGAGGATGCCGGCGACGCGCTGGCGGGTGCTGGGGGTGGGTCCGAAAC
TGCTGTGCCCGACGTCGTCGTCGTGCAAAAGTGCTACGGCGGCGATTCTG
GCGATGGCGGCGGTTCTAGCGGCGGTAACGGCGGCGGTAGCGGTGGCATT
TCCGGGCGGCAGAGGGCGTGGCGGCTGCGGGAGCTGGAGAAGGAGGAGGT
GGAAGAGATTGGGCGGCGCGAAGCGGCGGCGGTCGAGACGGACTACGAAC
GTTTCCTGCAACAGCTCGAGGCCGACAAGGAGATGCGGCAGCAGGTCAAC
CTCTACCGGCGGCCCGCTGCAGGTGCAGGCACCGCGTTTGGGACACGTGG
AGTGGCAGCGGCATCAGCATTAGGGACAGGAGCGTCCGCTATGGAGACTG
GCGAGGACGGCGGCGGCAGCGAGGCGGACGTGGAGGAGGTACGGCTGGAA
GAGCTGCTGGATGATTTGATGCTTGACGACACGTCGGCACCGCCGGACGA
CGCTTCGGCGGCCGCTTCTGCTGCTTCGGCGGCGGCAGACGGCGCCGCCG
CGGTGTTTGCGGCGGGGGCAGCGCCGGCGCCATCGCAGGTGTGGCAAGGG
TTCGGCGAGGATGATCCGGATTTGTGA
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