mRNA_P-wetherbeei_contig7089.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7089.2.1
Unique NamemRNA_P-wetherbeei_contig7089.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: D7FTI2_ECTSI (Store-operated calcium entry-associated regulatory factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTI2_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.040e-16
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3 
Query:    3 CKNVGLGDDGMPRWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLN 170
            CKN G GDDG P+W C ADLP   ALG V VSCEG+DSP D YVLVGSC LTY+L+
Sbjct:   63 CKNQGTGDDGQPQWECSADLPADGALGAVTVSCEGFDSPSDPYVLVGSCSLTYSLD 118
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A316UEM1_9BASI (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UEM1_9BASI)

HSP 1 Score: 68.9 bits (167), Expect = 2.930e-11
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 3 
Query:   18 LGDDGMPRWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLNFASGGGAADD 200
            LGD+   +W CEADLP S+ +G+V VSCEGY++P D YVL GSC LTY L  AS   +++D
Sbjct:   49 LGDE---QWRCEADLPPSIRMGRVEVSCEGYEAPNDPYVLKGSCALTYQLLPASKAFSSED 106
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A316UYP8_9BASI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UYP8_9BASI)

HSP 1 Score: 72.8 bits (177), Expect = 4.340e-11
Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 3 
Query:    3 CKNVGLGDDGMPRWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLNFASGGGAADDGSSRY 215
            C ++G G     +W CEADLP S+ LG+V VSCEGY+SP D YVL  SC LTY L  A G   ADD +  Y
Sbjct:   81 CTSLGDG-----QWKCEADLPSSIRLGRVEVSCEGYESPRDPYVLKDSCGLTYKLLPAYGAMGADDETMHY 146
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: Q5K6V7_CRYNJ (Store-operated calcium entry-associated regulatory factor n=1 Tax=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) TaxID=214684 RepID=Q5K6V7_CRYNJ)

HSP 1 Score: 68.2 bits (165), Expect = 1.340e-9
Identity = 40/94 (42.55%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:    3 CKNVGLGDDGMP--RWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLNFASGGGAADDGSSRYSG---------KRAFNVFCFL 251
            C N  +GDDG+   +W C+ D+P SL LGKV VSCEG+ +P D Y+L GSC LTY L   + G   + G   YS           +AFN+  +L
Sbjct:   55 CTN--MGDDGLGNVQWKCDTDIPSSLRLGKVDVSCEGWSAPGDPYILQGSCGLTYNLYKVNKG--LEYGEDPYSTLPSHYDRVFNKAFNIIFYL 144
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: R7S1R4_PUNST (Store-operated calcium entry-associated regulatory factor n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=R7S1R4_PUNST)

HSP 1 Score: 67.0 bits (162), Expect = 3.070e-9
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 3 
Query:    3 CKNVGLGDDGMPRWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTL 167
            C+N G G      W CEADLP+SL LG+V VSCEG+  P D YVL GSC L Y L
Sbjct:   48 CRNAG-GSGTDVNWKCEADLPESLRLGRVEVSCEGWSGPGDPYVLKGSCSLEYRL 101
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A1Y3BFY4_EURMA (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BFY4_EURMA)

HSP 1 Score: 63.5 bits (153), Expect = 3.490e-9
Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 3 
Query:   21 GDDGMP-RWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLNFASGG 185
            G DG   +W C+AD+P     G++ +SCEGYDS  D+Y+L GSC L YT++  SGG
Sbjct:   61 GSDGQSIQWECKADMPSRYKFGQLEMSCEGYDSADDEYILAGSCGLRYTIDERSGG 116
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A7R9YLW1_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YLW1_DIALT)

HSP 1 Score: 63.9 bits (154), Expect = 4.350e-9
Identity = 26/36 (72.22%), Postives = 29/36 (80.56%), Query Frame = 2 
Query:  707 EDLPLPQGWEKRVDPESGRPYFVDHASQATAWEDPR 814
            E  PLP GWE+RVDP SG+PY+VDHA Q T WEDPR
Sbjct:   30 ESRPLPPGWEERVDPGSGKPYYVDHARQLTTWEDPR 65
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A0L0DID3_THETB (Store-operated calcium entry-associated regulatory factor n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DID3_THETB)

HSP 1 Score: 66.6 bits (161), Expect = 5.880e-9
Identity = 34/75 (45.33%), Postives = 40/75 (53.33%), Query Frame = 3 
Query:    3 CKNVGLGDDGMP--RWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLNFASGGGAADDGSSRYSG 221
            C N+G G  G     W CEA LP +L  G   V+CEGY+SP D YVL GSC + YT+            SS YSG
Sbjct:   92 CTNMGPGGFGGNDISWKCEASLPSNLVFGSTTVTCEGYESPDDPYVLKGSCGVNYTIKRVGSASPTGYSSSSYSG 166
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A6G1SEK8_9ACAR (Store-operated calcium entry-associated regulatory factor n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SEK8_9ACAR)

HSP 1 Score: 66.2 bits (160), Expect = 6.460e-9
Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 3 
Query:    3 CKNVGLGDD--GMPRWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTLNFAS 179
            C N G  D   G P+W C+AD+   +    V V CEGYD P DDY+L+GSC L +TL++ +
Sbjct:  130 CHNTGTNDKTTGKPKWRCQADMSDRVQFNHVEVICEGYDYPEDDYILMGSCGLEFTLDYVN 190
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BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Match: A0A4S4LTD8_9AGAM (Store-operated calcium entry-associated regulatory factor n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LTD8_9AGAM)

HSP 1 Score: 67.4 bits (163), Expect = 6.500e-9
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 3 
Query:    3 CKNVGLGDDGMPRWSCEADLPQSLALGKVLVSCEGYDSPLDDYVLVGSCQLTYTL 167
            C N+G GD     W CEADLP++L LG+V VSCEG+  P D YVL GSC L Y L
Sbjct:  736 CVNIG-GDGTDVDWKCEADLPETLRLGRVQVSCEGWSGPGDPYVLKGSCSLEYRL 789
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7089.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTI2_ECTSI1.040e-1669.64Store-operated calcium entry-associated regulatory... [more]
A0A316UEM1_9BASI2.930e-1155.74Store-operated calcium entry-associated regulatory... [more]
A0A316UYP8_9BASI4.340e-1153.52Store-operated calcium entry-associated regulatory... [more]
Q5K6V7_CRYNJ1.340e-942.55Store-operated calcium entry-associated regulatory... [more]
R7S1R4_PUNST3.070e-958.18Store-operated calcium entry-associated regulatory... [more]
A0A1Y3BFY4_EURMA3.490e-950.00Store-operated calcium entry-associated regulatory... [more]
A0A7R9YLW1_DIALT4.350e-972.22Hypothetical protein (Fragment) n=1 Tax=Diacronema... [more]
A0A0L0DID3_THETB5.880e-945.33Store-operated calcium entry-associated regulatory... [more]
A0A6G1SEK8_9ACAR6.460e-945.90Store-operated calcium entry-associated regulatory... [more]
A0A4S4LTD8_9AGAM6.500e-958.18Store-operated calcium entry-associated regulatory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7089contigP-wetherbeei_contig7089:1748..3140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size834
Hectar predicted targeting categoryother localisation
Exons3
Cds size516
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186957.166586-UTR-P-wetherbeei_contig7089:1747..18331683186957.166586-UTR-P-wetherbeei_contig7089:1747..1833Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7089 1748..1833 +
1683186957.1829057-UTR-P-wetherbeei_contig7089:2050..22811683186957.1829057-UTR-P-wetherbeei_contig7089:2050..2281Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7089 2051..2281 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186957.1964092-CDS-P-wetherbeei_contig7089:2281..24961683186957.1964092-CDS-P-wetherbeei_contig7089:2281..2496Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7089 2282..2496 +
1683186957.2079062-CDS-P-wetherbeei_contig7089:2839..31401683186957.2079062-CDS-P-wetherbeei_contig7089:2839..3140Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7089 2840..3140 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7089.2.1prot_P-wetherbeei_contig7089.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7089 2282..3140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7089.2.1

>prot_P-wetherbeei_contig7089.2.1 ID=prot_P-wetherbeei_contig7089.2.1|Name=mRNA_P-wetherbeei_contig7089.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp
MPVPPNSLAKRTLNTSSTDPAAAAPAAAAVRASHGVGRTTVTPQAAGTSA
RHFSASRSSSSWCGWCGAASRGATVPSWPLIITSRPRCHLASLSSRPCRS
PRRCRWRNRRRRSSRCRRHRRRSRHHRPARRTYRFRRAGRSASIRSQGGR
ILWTTRARRRRGRTHGRRSSRS
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mRNA from alignment at P-wetherbeei_contig7089:1748..3140+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7089.2.1 ID=mRNA_P-wetherbeei_contig7089.2.1|Name=mRNA_P-wetherbeei_contig7089.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1393bp|location=Sequence derived from alignment at P-wetherbeei_contig7089:1748..3140+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGCAAAAATGTCGGACTCGGAGATGATGGGATGCCTCGATGGAGCTGC
GAAGCCGATTTGCCACAAAGCCTCGCTTTGGGAAAAGTAAGACTTCGGCC
GAAGCGCAACCGCCGGCCCCCGGCCGGCCTGAAGAATAGAATTGATAGCC
ATATTAGCGGTGCTTTGTTCCAGCGGTTGCTGCAACCGCATGAGACGTTT
GTGAAGTGGGGAGGAGACGAAGTGGGATAGAACCGCTGGCATTCCGTTTC
CGAATACACGCGTTTCTTTGTCGTGCCTTTTCTCTGTCCTTTCCTGCTCT
TAGGTCCTCGTCTCGTGCGAAGGCTACGACAGCCCATTAGACGATTACGT
GCTCGTGGGGAGCTGCCAGCTCACGTACACGCTCAACTTCGCTAGCGGCG
GCGGCGCTGCCGATGACGGCAGCAGCAGGTATAGCGGCAAAAGAGCCTTT
AACGTATTCTGTTTCCTGCACTAGAGCTCTGGAGCAACGTAACCTGCTTC
TTTTTAGCAACGAAGCGGGTTCTGGCTCCTCAGAATGCCCGTTCCGCCAA
ATTCCCTCGCAAAACGCACTCTAAACACTTCGTCCACCGATCCGGCGGCA
GCAGCACCAGCAGCAGCGGCAGTTCGAGCTTCACATGGAGTCGGCCGCAC
CACAGTTACCCCTCAAGCGGCTGGAACCTCGGCCAGGCATTTTTCAGCGT
CGCGTTCTTCTTCTTCTTGGTGCGGCTGGTGTGGCGCTGCCAGTCGAGGG
TAAGCCTGCCAACGAAGGCCTTCCGACACATGTTTCTATCTCTCTCGTTC
TGAGTGGTTCTCTTCTTGCGCATTTCCGTCTATCTATTTGCCCGCCTGGA
CCCTTTTACCACTGCAAACGCACTTCTTTAGTGCAAGGAATTGGTGTAGT
GCTGGCGCAAGGAACTCTTTTCACAATTTGTCATGGTGACAAATACAACC
ACTTGCCGGACCATCTGTCGTCTCTCCCCCTTTAACGCGACAAGAACGAA
CGGTTTCATCGGCGTTTAGCGATAGCTCCGTTCTAATTTTTGTTCACCCT
TTTGCCCTCTGCCGCCGCCTGCGACTGTTTCTCTCCCCGCAGTGCAACCG
TTCCATCGTGGCCTCTTATCATAACGTCCAGACCGCGGTGCCACCTGGCA
TCGCTGTCGTCACGGCCGTGCCGGTCGCCACGGCGCTGCCGCTGGCGCAA
CCGACGCCGCCGCTCCAGCCGCTGCCGCCGCCACCGCCGCCGGTCGCGCC
ACCACCGGCCCGCCCGGAGGACTTACCGCTTCCGCAGGGCTGGGAGAAGC
GCGTCGATCCGGAGTCAGGGCGGCCGTATTTTGTGGACCACGCGAGCCAG
GCGACGGCGTGGGAGGACCCACGGGCGGCGCTCTTCGCGGAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7089:1748..3140+

>mRNA_P-wetherbeei_contig7089.2.1 ID=mRNA_P-wetherbeei_contig7089.2.1|Name=mRNA_P-wetherbeei_contig7089.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig7089:1748..3140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGTTCCGCCAAATTCCCTCGCAAAACGCACTCTAAACACTTCGTC
CACCGATCCGGCGGCAGCAGCACCAGCAGCAGCGGCAGTTCGAGCTTCAC
ATGGAGTCGGCCGCACCACAGTTACCCCTCAAGCGGCTGGAACCTCGGCC
AGGCATTTTTCAGCGTCGCGTTCTTCTTCTTCTTGGTGCGGCTGGTGTGG
CGCTGCCAGTCGAGGTGCAACCGTTCCATCGTGGCCTCTTATCATAACGT
CCAGACCGCGGTGCCACCTGGCATCGCTGTCGTCACGGCCGTGCCGGTCG
CCACGGCGCTGCCGCTGGCGCAACCGACGCCGCCGCTCCAGCCGCTGCCG
CCGCCACCGCCGCCGGTCGCGCCACCACCGGCCCGCCCGGAGGACTTACC
GCTTCCGCAGGGCTGGGAGAAGCGCGTCGATCCGGAGTCAGGGCGGCCGT
ATTTTGTGGACCACGCGAGCCAGGCGACGGCGTGGGAGGACCCACGGGCG
GCGCTCTTCGCGGAGC
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