prot_P-wetherbeei_contig7085.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7085.2.1
Unique Nameprot_P-wetherbeei_contig7085.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7085.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040504TFIIF, beta subunit, N-terminalPFAMPF17683TFIIF_beta_Ncoord: 29..75
e-value: 1.4E-8
score: 35.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR011039Transcription Factor IIF, Rap30/Rap74, interactionSUPERFAMILY50916Rap30/74 interaction domainscoord: 19..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7085contigP-wetherbeei_contig7085:2581..3204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7085.2.1mRNA_P-wetherbeei_contig7085.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7085 2361..3204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7085.2.1 ID=prot_P-wetherbeei_contig7085.2.1|Name=mRNA_P-wetherbeei_contig7085.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp
MLKREAPAAAEEGPRKVPKNELDLNRSDKEVWLVKVPALVYAAWQATDAD
TDVGKLVVRTDPRTGRTTMTVQLKPPTEAAAAAANAAAAGGYARVSTAGA
PGSGSNAPPPRAPKAAPGGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040504TFIIF_beta_N
IPR011039TFIIF_interaction