mRNA_P-wetherbeei_contig7081.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7081.1.1
Unique NamemRNA_P-wetherbeei_contig7081.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A7K0VFS5_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID=1 RepID=A0A7K0VFS5_9ACTN)

HSP 1 Score: 369 bits (947), Expect = 1.740e-123
Identity = 184/238 (77.31%), Postives = 212/238 (89.08%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            IV PSAD  L+VR ITFSAAGTAGQRCTTLRR+IVH SRH+E++ERL  A+++L +G+P E  TLVGPLIN AA+++M  A+  A ADGG ++VGGERLL  +A  AAYTRPAI+TMP QT+IVATETFAPLLYVM+YDD D+A+A+QN VPQGLASS+FTTDVREAERFC+A+GSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYS +LPLAQGV+F
Sbjct:  275 IVAPSADAELAVRGITFSAAGTAGQRCTTLRRVIVHNSRHDELIERLATAYATLPVGNPFESSTLVGPLINTAAFDKMSAAISAATADGGHLIVGGERLLLDQAPHAAYTRPAIVTMPAQTAIVATETFAPLLYVMRYDDLDQAIALQNGVPQGLASSIFTTDVREAERFCAADGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSNDLPLAQGVQF 512          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A6I3WI61_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID=1 RepID=A0A6I3WI61_9ACTN)

HSP 1 Score: 365 bits (938), Expect = 3.650e-122
Identity = 186/238 (78.15%), Postives = 210/238 (88.24%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            IV PSAD  L VR +TFSAAGTAGQRCTTLRR+IVH SRH+E+VERL AA++SL +G+P E  TLVGPLI  AA+++M  A+  A+ADGGQ+VVGGERL A +A  AAYTRPAI+TMP QT+IVA ETFAPLLYVM+YD FDEA+A+ N VPQGLASS+FTTDVREAERFC+++GSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYS ELPLAQGV F
Sbjct:  272 IVAPSADFELVVRGVTFSAAGTAGQRCTTLRRVIVHSSRHDELVERLAAAYASLPVGNPFESTTLVGPLITTAAFDKMSSAIAAARADGGQLVVGGERLYADDAPDAAYTRPAIVTMPAQTAIVAEETFAPLLYVMRYDTFDEAIALHNDVPQGLASSIFTTDVREAERFCASDGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSNELPLAQGVEF 509          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A539E860_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E860_9ACTN)

HSP 1 Score: 356 bits (913), Expect = 2.130e-118
Identity = 181/239 (75.73%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRFG 717
            I+ PSA L L+VR I FSAAGTAGQRCTTLRRLIVHRSR +E+  ++  AF+SL IG PL V TLVGPLI + A+ERM+LAM  A+  GG+VVVGG+R L   A  AAY  PA+++MP QT IVATETFAPLLY+M YDDFDEA+A+QN VPQGLASS+FTTDVREAERFC+A+GSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNT+NYS +LPLAQGV+FG
Sbjct:  271 IIAPSAVLDLAVRGIVFSAAGTAGQRCTTLRRLIVHRSRVDELQSKVATAFASLPIGDPLAVGTLVGPLITMTAFERMQLAMREAEDQGGEVVVGGDRRLGDAAPHAAYAAPALVSMPAQTDIVATETFAPLLYLMTYDDFDEAIALQNGVPQGLASSIFTTDVREAERFCTADGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTINYSDDLPLAQGVQFG 509          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A7K1B681_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID=1 RepID=A0A7K1B681_9ACTN)

HSP 1 Score: 346 bits (888), Expect = 1.130e-114
Identity = 177/238 (74.37%), Postives = 201/238 (84.45%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            IV PSADL L+VR ITF+AAGTAGQRCTTLRRLIVHRS  +EVV R+  AF SL +G PL+  TLVGPLI  AA+ERM  A++ A  DGG VVVGGERL A +A  AAY RPA++TMP QT +V TETFAP+LYV+ YDD DEA+A+QN VPQGLASS+FT D+REAERF +A+GSDCGIANVNIGPSGAEIGGAFGGEK+TGGGRESGSDAWKAYMRR TNT+N+S  LPLAQGVRF
Sbjct:  267 IVAPSADLDLAVRGITFAAAGTAGQRCTTLRRLIVHRSLVDEVVGRVATAFESLPVGDPLDAGTLVGPLITSAAHERMLAALDAAMDDGGHVVVGGERLFADDAPDAAYVRPALVTMPSQTEVVETETFAPVLYVLAYDDLDEAIALQNGVPQGLASSIFTRDLREAERFMAADGSDCGIANVNIGPSGAEIGGAFGGEKSTGGGRESGSDAWKAYMRRTTNTINFSDALPLAQGVRF 504          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A6I3F2L4_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID=1 RepID=A0A6I3F2L4_9ACTN)

HSP 1 Score: 343 bits (880), Expect = 1.770e-113
Identity = 177/239 (74.06%), Postives = 198/239 (82.85%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRFG 717
            I+ PSAD  L VR +TFSAAGTAGQRCT+LRRLIVH SR +EVV RL  AF+SL +GSPL+  TLVGPL+ V + +RM  A+  AQADGG VVVGGER  A +   AAY RPAI+ MP QT+IV TETFAP+LYVM YD FDEAV + N VPQGLASS+FTTD+R+AERF SA GSDCGIANVNIGPSGAEIGGAFGGEK+TGGGRESGSDAWK YMRRATNT+NYS ELPLAQGV FG
Sbjct:  266 IIAPSADAELVVRGVTFSAAGTAGQRCTSLRRLIVHTSRLDEVVSRLSTAFASLPVGSPLDKATLVGPLVTVGSLDRMHAAIHTAQADGGTVVVGGERHFAEQMPDAAYVRPAIVAMPGQTAIVHTETFAPILYVMAYDTFDEAVHLHNEVPQGLASSIFTTDLRDAERFMSAAGSDCGIANVNIGPSGAEIGGAFGGEKSTGGGRESGSDAWKGYMRRATNTINYSNELPLAQGVEFG 504          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A094PM67_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=3 Tax=root TaxID=1 RepID=A0A094PM67_9ACTN)

HSP 1 Score: 337 bits (863), Expect = 9.300e-111
Identity = 172/238 (72.27%), Postives = 200/238 (84.03%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            I+TPSADL L+VR ITFSAAGTAGQRCTTLRRLIVH SR +EV ER+G A+++LR+GSPL+ + LVGPLIN+ +   M+ A++ A++DGG V+ GG+R    EA  AAY RPA++ MP QT IVATETFAP+LYVM Y  FDEA+ +QN VPQGLASSVFTTD+REAERF SA GSDCGIANVNIGPSGAEIGGAFGGEK TGGGRESGSD+WKAYMRR T T+NYS +LPLAQGV F
Sbjct:  278 IITPSADLDLAVRGITFSAAGTAGQRCTTLRRLIVHESRIDEVCERVGKAYNNLRVGSPLDSNNLVGPLINLQSLHTMQAAIKQAESDGGVVIAGGQRHETPEAPEAAYIRPALVRMPAQTDIVATETFAPILYVMSYSTFDEAIELQNGVPQGLASSVFTTDLREAERFTSAIGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDSWKAYMRRQTQTINYSDQLPLAQGVVF 515          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A4R7I508_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7I508_9ACTN)

HSP 1 Score: 335 bits (858), Expect = 3.820e-110
Identity = 172/238 (72.27%), Postives = 194/238 (81.51%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            IV PSADL L+VR I FSAAGTAGQRCTTLRRLIVHRS H+E+VE++  A+ SL IG PL   TLVGPLI+  +++RM+ A+E AQ DGG VV GG+R L  EA  A Y RPAI+TMP QT IV +ETFAP+LY M YDD D+A+A+ N VPQGLASS+FTTD+REAE F  A GSDCGIANVNIGPSGAEIGGAFGGEK TGGGRESGSDAWK YMRR TNTVNYS +LPLAQGV F
Sbjct:  266 IVAPSADLDLAVRGIVFSAAGTAGQRCTTLRRLIVHRSVHDEIVEKVAKAYESLPIGDPLADGTLVGPLIDGGSFDRMQAALETAQGDGGTVVAGGDRALDDEAPDAFYARPAIVTMPGQTEIVRSETFAPILYAMAYDDLDDAIALHNEVPQGLASSIFTTDLREAETFIGAAGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDAWKGYMRRQTNTVNYSRDLPLAQGVNF 503          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A2W6CZA5_9PSEU (Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Pseudonocardiales bacterium TaxID=2201155 RepID=A0A2W6CZA5_9PSEU)

HSP 1 Score: 334 bits (857), Expect = 5.730e-110
Identity = 170/239 (71.13%), Postives = 200/239 (83.68%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRFG 717
            IV PSADL L+VR I FSAAGTAGQRCT+LRR+I H S  +E+V ++ AA+ +L IGSPL   TLVGPL++ AAYE    A++ AQADGG+++ GG+R+LA E+  A Y +PA++ MP Q+ +V TETFAP+LYV+ YDDFDEA+AM N VPQGL+SS+FT DVREAERF S +GSDCGIANVNIGPSGAEIGGAFGGEK TGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGV FG
Sbjct:  269 IVAPSADLDLTVRGIVFSAAGTAGQRCTSLRRVIAHSSIADELVAKIKAAYETLPIGSPLADGTLVGPLVDRAAYEGYTTALDKAQADGGELIAGGQRVLADESGEAYYVQPALVRMPAQSDVVRTETFAPILYVLTYDDFDEALAMHNDVPQGLSSSIFTLDVREAERFTSPDGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVEFG 507          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A7W0KYC5_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KYC5_9ACTN)

HSP 1 Score: 333 bits (853), Expect = 1.060e-109
Identity = 171/238 (71.85%), Postives = 195/238 (81.93%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            IV PSADL L+VR I FSA GTAGQRCT+LRRLIVH S  +E+VERL  A++S+ IG PL   TLVGPLI+  A++R+  A+E A  DGG+VVVGGER+LA     A Y +PAI+TMP QT +V TETF PLLYV+ YD+ DEA+A+ N VPQGLASS+FT DVREAERF SA+GSDCGIANVNIGPSGAEIGGAFGGEK TGGGRESGSDAWK YMRRATNT+NYST LPLAQGV F
Sbjct:  240 IVGPSADLELTVRGIVFSAVGTAGQRCTSLRRLIVHESIRDELVERLAKAYASVPIGDPLADGTLVGPLIDAPAFDRITAAIETATGDGGEVVVGGERVLAEAGPDARYVQPAIVTMPAQTDVVRTETFGPLLYVLGYDELDEAIALHNDVPQGLASSIFTNDVREAERFMSADGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDAWKGYMRRATNTINYSTSLPLAQGVSF 477          
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Match: A0A524B345_9ACTN (Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B345_9ACTN)

HSP 1 Score: 332 bits (851), Expect = 5.340e-109
Identity = 171/238 (71.85%), Postives = 201/238 (84.45%), Query Frame = 1
Query:    1 IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAAFSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLLAHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNAVPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEKTTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRF 714
            IVTPSADL L+VR ITF+AAGTAGQRCTTLRRL+VHRSR +EV +R+  AF SLRIG+PL  + LVGPLI++ + + MR A++ A+ DGG V+VGGER+ A  +  AAY  PA++ MP QT IV TETFAP+LYVM YDDFDEA+ +QN VPQGLASS+FTTD+REAERF   +GSDCGIANVNIGPSGAEIGGAFGGEK TGGGRESGSD+WKAYMRR+T TVNYS +LPLAQGV+F
Sbjct:  275 IVTPSADLDLAVRGITFAAAGTAGQRCTTLRRLLVHRSRVDEVADRVSRAFVSLRIGNPLVDEPLVGPLISMRSLQTMRSALDQARGDGG-VIVGGERVHADASPEAAYVSPAVVRMPAQTDIVRTETFAPILYVMAYDDFDEAITIQNDVPQGLASSIFTTDLREAERFTGPSGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDSWKAYMRRSTATVNYSNDLPLAQGVKF 511          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7081.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K0VFS5_9ACTN1.740e-12377.31Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID... [more]
A0A6I3WI61_9ACTN3.650e-12278.15Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID... [more]
A0A539E860_9ACTN2.130e-11875.73Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Acidimicro... [more]
A0A7K1B681_9ACTN1.130e-11474.37Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID... [more]
A0A6I3F2L4_9ACTN1.770e-11374.06Aldehyde dehydrogenase (NAD(+)) n=2 Tax=root TaxID... [more]
A0A094PM67_9ACTN9.300e-11172.27Aldehyde dehydrogenase (NAD(+)) n=3 Tax=root TaxID... [more]
A0A4R7I508_9ACTN3.820e-11072.27Aldehyde dehydrogenase (NAD(+)) n=2 Tax=Acidimicro... [more]
A0A2W6CZA5_9PSEU5.730e-11071.13Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Pseudonoca... [more]
A0A7W0KYC5_9ACTN1.060e-10971.85Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Acidimicro... [more]
A0A524B345_9ACTN5.340e-10971.85Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Acidimicro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7081contigP-wetherbeei_contig7081:1..720 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog246196.MSMEI_1719
Preferred namepcd
PFAMsAldedh
Model size720
Max annot lvl201174|Actinobacteria
KEGG rclassRC00047,RC00071,RC00080,RC00186,RC00218,RC00242,RC00816,RC01500
KEGG koko:K00128
KEGG ReactionR00264,R00631,R00710,R00904,R01752,R01986,R02549,R02678,R02940,R02957,R03283,R03869,R04065,R04506,R04903,R05050,R05237,R05238,R05286,R06366,R08146
KEGG Pathwayko00010,ko00053,ko00071,ko00280,ko00310,ko00330,ko00340,ko00380,ko00410,ko00561,ko00620,ko00625,ko00903,ko00981,ko01100,ko01110,ko01120,ko01130,map00010,map00053,map00071,map00280,map00310,map00330,map00340,map00380,map00410,map00561,map00620,map00625,map00903,map00981,map01100,map01110,map01120,map01130
KEGG ModuleM00135
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.18e-105
EggNOG OGsCOG1012@1|root,COG1012@2|Bacteria,2GT45@201174|Actinobacteria,232CK@1762|Mycobacteriaceae
EC1.2.1.3
DescriptionBelongs to the aldehyde dehydrogenase family
Cds size720
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186956.7970345-CDS-P-wetherbeei_contig7081:0..7201683186956.7970345-CDS-P-wetherbeei_contig7081:0..720Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7081 1..720 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7081.1.1prot_P-wetherbeei_contig7081.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7081 1..720 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7081.1.1

>prot_P-wetherbeei_contig7081.1.1 ID=prot_P-wetherbeei_contig7081.1.1|Name=mRNA_P-wetherbeei_contig7081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp
IVTPSADLPLSVRAITFSAAGTAGQRCTTLRRLIVHRSRHNEVVERLGAA
FSSLRIGSPLEVDTLVGPLINVAAYERMRLAMENAQADGGQVVVGGERLL
AHEAAAAAYTRPAIITMPEQTSIVATETFAPLLYVMQYDDFDEAVAMQNA
VPQGLASSVFTTDVREAERFCSANGSDCGIANVNIGPSGAEIGGAFGGEK
TTGGGRESGSDAWKAYMRRATNTVNYSTELPLAQGVRFG*
back to top

mRNA from alignment at P-wetherbeei_contig7081:1..720+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7081.1.1 ID=mRNA_P-wetherbeei_contig7081.1.1|Name=mRNA_P-wetherbeei_contig7081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig7081:1..720+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGTCACGCCCTCGGCCGACCTCCCGCTCAGCGTCCGTGCGATCACCTT CTCGGCGGCGGGCACCGCGGGCCAGCGATGCACCACGCTGCGCCGGCTGA TCGTGCATCGCTCACGCCACAACGAGGTCGTCGAACGGCTGGGCGCGGCG TTCAGCAGCCTGCGCATCGGCAGCCCCTTGGAGGTGGACACGTTGGTCGG ACCGTTGATCAACGTTGCCGCCTACGAGCGGATGCGGCTGGCGATGGAGA ACGCCCAAGCCGACGGCGGTCAGGTCGTGGTCGGCGGTGAGCGCCTGCTC GCCCACGAGGCAGCCGCAGCTGCGTACACGCGTCCAGCGATCATCACCAT GCCGGAGCAGACGTCGATCGTCGCCACCGAGACGTTCGCCCCGCTGCTCT ACGTGATGCAGTACGACGACTTCGACGAGGCCGTGGCGATGCAGAACGCC GTGCCCCAGGGGTTGGCCAGCAGCGTGTTCACCACCGACGTGCGCGAAGC CGAGCGGTTCTGCTCGGCGAACGGCAGCGACTGCGGCATCGCCAACGTCA ACATCGGCCCCAGCGGGGCCGAGATCGGCGGTGCGTTCGGCGGCGAGAAG ACCACCGGCGGCGGACGCGAGAGCGGCAGCGACGCGTGGAAGGCGTACAT GCGGCGAGCGACGAACACGGTGAACTACTCCACCGAGCTGCCCCTCGCCC AGGGTGTGCGGTTCGGCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7081:1..720+

>mRNA_P-wetherbeei_contig7081.1.1 ID=mRNA_P-wetherbeei_contig7081.1.1|Name=mRNA_P-wetherbeei_contig7081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig7081:1..720+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGTCACGCCCTCGGCCGACCTCCCGCTCAGCGTCCGTGCGATCACCTT
CTCGGCGGCGGGCACCGCGGGCCAGCGATGCACCACGCTGCGCCGGCTGA
TCGTGCATCGCTCACGCCACAACGAGGTCGTCGAACGGCTGGGCGCGGCG
TTCAGCAGCCTGCGCATCGGCAGCCCCTTGGAGGTGGACACGTTGGTCGG
ACCGTTGATCAACGTTGCCGCCTACGAGCGGATGCGGCTGGCGATGGAGA
ACGCCCAAGCCGACGGCGGTCAGGTCGTGGTCGGCGGTGAGCGCCTGCTC
GCCCACGAGGCAGCCGCAGCTGCGTACACGCGTCCAGCGATCATCACCAT
GCCGGAGCAGACGTCGATCGTCGCCACCGAGACGTTCGCCCCGCTGCTCT
ACGTGATGCAGTACGACGACTTCGACGAGGCCGTGGCGATGCAGAACGCC
GTGCCCCAGGGGTTGGCCAGCAGCGTGTTCACCACCGACGTGCGCGAAGC
CGAGCGGTTCTGCTCGGCGAACGGCAGCGACTGCGGCATCGCCAACGTCA
ACATCGGCCCCAGCGGGGCCGAGATCGGCGGTGCGTTCGGCGGCGAGAAG
ACCACCGGCGGCGGACGCGAGAGCGGCAGCGACGCGTGGAAGGCGTACAT
GCGGCGAGCGACGAACACGGTGAACTACTCCACCGAGCTGCCCCTCGCCC
AGGGTGTGCGGTTCGGCTGA
back to top