mRNA_P-wetherbeei_contig7061.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A0D9X1X1_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9X1X1_9ORYZ) HSP 1 Score: 134 bits (337), Expect = 3.010e-30 Identity = 93/274 (33.94%), Postives = 133/274 (48.54%), Query Frame = 2
Query: 422 PQVTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
P +++ I + TFF AGH+TT++LLTWT+ LL+ H EWQEK R EVI CG + PN GDV L++LKLL L ETLRLY P + R + GG+E+ G+ +P G ++ + IH ++VW E+A + P R++ GV KH A LSF +G RSCIG+NFAM+EA + +L+R+ F P P ++TL P+ G LP+++
Sbjct: 308 PLLSMDEIIAECKTFFFAGHDTTSHLLTWTMFLLSTHQEWQEKIREEVIMECG----------------------------------------------HEVPN------GDV----LNKLKLLNMFLLETLRLYGPVAFIQRKVADGGVEIA-GIAVPDGAVVSIPIATIHRDKEVWGEDADEFRPERFEN--------GVLKAAAKHPNALLSFSSGLRSCIGQNFAMIEAKAVIAMILQRFSFTLSPKYVH-SPTEVITLRPKYG-LPMIL 514
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A446Y5B6_TRITD (Uncharacterized protein n=9 Tax=Triticeae TaxID=147389 RepID=A0A446Y5B6_TRITD) HSP 1 Score: 133 bits (334), Expect = 8.390e-30 Identity = 95/272 (34.93%), Postives = 127/272 (46.69%), Query Frame = 2
Query: 428 VTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
+++ I D+ TFF AGH+TT++LLTW + LL HPEWQ+K R EV+ CGG G P H GD L++LKL VLYETLRLY ++ R EL G+ +P GTT + + +H E+VW A + P R+Q VG KH A L+F AG RSCIG++FAMLEA E+LRR+ F P P +TL P+ G LP+++
Sbjct: 318 ISMDEIIDECKTFFFAGHDTTSHLLTWAIFLLGTHPEWQQKLREEVLRECGGTG---------------------------------------------TPLH-----GDA----LNKLKLTTMVLYETLRLYGAVIMIARETT-ADTELG-GVKIPRGTTTMIPMAIMHRDEEVWGAEAGKFKPDRFQNGVGRAA---------KHPSAMLAFSAGPRSCIGQDFAMLEAKATLAEILRRFEFEVAPEYVHA-PAEFLTLQPKCG-LPVLL 522
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: M8A7K5_TRIUA (Secologanin synthase n=2 Tax=Triticum TaxID=4564 RepID=M8A7K5_TRIUA) HSP 1 Score: 130 bits (328), Expect = 1.340e-29 Identity = 94/272 (34.56%), Postives = 127/272 (46.69%), Query Frame = 2
Query: 428 VTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
+++ I D+ TFF AGH+TT++LLTW + LL HPEWQ+K R EV+ CGG G P H GD L++LKL VLYETLRLY ++ R EL G+ +P GTT + + +H E+VW +A + P R+Q VG KH A L+F AG RSCIG++FAMLEA +LRR+ F P P +TL P+ G LP+++
Sbjct: 211 ISMDEIIDECKTFFFAGHDTTSHLLTWAIFLLGTHPEWQQKLREEVLRECGGTG---------------------------------------------TPLH-----GDA----LNKLKLTTMVLYETLRLYGAVIMIARETR-ADTELG-GVKIPKGTTTMIPMAIMHRDEEVWGADAGEFKPDRFQNGVGRAA---------KHPSAMLAFSAGPRSCIGQDFAMLEAKATLAVILRRFEFEVAPEYVHA-PAEFLTLQPKCG-LPVLL 415
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: J3MNB7_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3MNB7_ORYBR) HSP 1 Score: 126 bits (317), Expect = 1.360e-29 Identity = 88/273 (32.23%), Postives = 130/273 (47.62%), Query Frame = 2
Query: 425 QVTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
Q+++ I + TFF G++TT++LLTWT+L+L+ HP+WQEK R EV+ C TS L++LKL+ L ETLRLY P L+ R G LEL G+ +P GT + + IH +++W E+A + P R++ V + KH A LSF +G RSCIG+NFAM+EA V+ +L+R+ F P V P ++TL P+ G LP+++
Sbjct: 40 QLSMDEIIAECKTFFFVGYDTTSHLLTWTMLMLSTHPDWQEKLREEVVTECSDKVPTS--------------------------------------------------------DMLNKLKLVNMFLLETLRLYSPVSLISRMAG-SDLELS-GIQVPKGTIIKILIAIIHRDKELWGEDADMFRPERFKNGVSKAA---------KHPNALLSFSSGPRSCIGQNFAMIEAKVVIAMILQRFSFTPSPKYVHV-PTSVITLRPKFG-LPMIL 243
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A3B6SCY4_WHEAT (Uncharacterized protein n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6SCY4_WHEAT) HSP 1 Score: 125 bits (315), Expect = 2.790e-29 Identity = 93/272 (34.19%), Postives = 125/272 (45.96%), Query Frame = 2
Query: 428 VTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
+++ I D+ TFF AGH+TTA+LLTW + LL HPEWQ+K R EV+ CGG G P H GD L++LKL VLYETLRLY ++ R EL G+ +P GT + +H E+VW +A + P R++ VG KH A L+F G RSCIG++FAMLEA V +LRR+ F P P +TL P+ G LP+++
Sbjct: 42 MSMDDIIDECKTFFFAGHDTTAHLLTWAIFLLGTHPEWQQKLREEVLRECGGTG---------------------------------------------TPLH-----GDA----LNKLKLTTMVLYETLRLYGAVIMIARQTM-ADTELG-GVKIPKGTITMIPTAMMHRDEEVWGADAGEFKPDRFRNGVGRAA---------KHPSAILAFAIGPRSCIGQDFAMLEAKATLVVILRRFEFEIAPEYVHA-PVEFLTLQPKCG-LPVLL 246
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: J3MK93_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3MK93_ORYBR) HSP 1 Score: 130 bits (327), Expect = 6.590e-29 Identity = 95/273 (34.80%), Postives = 129/273 (47.25%), Query Frame = 2
Query: 425 QVTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
Q+++ I D+ TFF AG++TT+ LLTWT+ LLA HPEWQEK R EV+ CG T GD+ L++ KL+ L ETLRLY P L+ R G LEL G++LP GT + + IH VW E+A + P R++ V KH A LSF +G RSCIG++FAMLEA V+ +L+R+ F P P ++TL P+ G LP+V+
Sbjct: 313 QLSMDEIIDECKTFFFAGNDTTSRLLTWTMFLLATHPEWQEKLREEVVTECGSEVLT----------------------------------------------------GDM----LNKWKLVNMFLLETLRLYSPVSLVRRRAGTN-LELG-GIMLPKGTLLTIPIATIHRDTNVWGEDAGEFRPKRFENGVSRAA---------KHPNALLSFSSGLRSCIGQDFAMLEAKVVIAMILQRFSFTLSPMYIHA-PIEVITLRPKYG-LPMVL 516
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A1Y1I0P6_KLENI (Cytochrome p450 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0P6_KLENI) HSP 1 Score: 130 bits (327), Expect = 7.540e-29 Identity = 94/269 (34.94%), Postives = 129/269 (47.96%), Query Frame = 2
Query: 437 KSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVWEN-AAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
+ + D+ +TF +AGHETTA LLTWT+ LL HPE+ EKARAE+ +V GG RA D++ L RLKLL+ +LYE+LRLYPP P+MGR + E+ G+ L GT + Y +H E +W N + P R+ + V K AFL F AG R+CIG+NFAM EA ++ V+LLR + P G P +T+ P+ G LP+V+
Sbjct: 330 EQLLDECMTFLLAGHETTAVLLTWTVYLLTSHPEYVEKARAEINDVLGG------------RA-------------------------------------------DISFEDLPRLKLLQGILYESLRLYPPVPMMGRTVV-RDTEIA-GIRLQKGTEVTIVSYPMHVREALWGNDVMEFRPERFANGISGAV---------KQPGAFLPFSAGPRTCIGQNFAMTEAKIVLVKLLRTFSLKLAP-GYRHFPVMYITMKPKHG-LPVVL 530
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A0D6QT03_ARACU (Uncharacterized protein n=4 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QT03_ARACU) HSP 1 Score: 129 bits (324), Expect = 1.630e-28 Identity = 90/269 (33.46%), Postives = 129/269 (47.96%), Query Frame = 2
Query: 422 PQVTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAP-LMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVWENAAA-YDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDG 1222
P++TV+ I D+ TF++AGHET++ LLTWT++LL H +WQE+AR EV+EVCG KN +PN + + LK + +L ETLRLYPPA LM + P L L +PAGT + + AIH +W N ++P R+ + + KH AF+ FG G +C+G+NFA+LEA V +L+R+ F PS T P ++TL P+ G
Sbjct: 312 PRMTVEEIIDECKTFYLAGHETSSILLTWTMILLGIHQDWQERARREVLEVCG---------------------------------------------KNNYPNADS----------ISCLKTVGMILNETLRLYPPALFLMRQTYKPMKLGK---LSIPAGTELMIPIVAIHHDPILWGNDVNDFNPERFNEGISKAA---------KHPMAFMPFGLGPTTCVGQNFALLEAKVALAMILQRFSFVTSPSYTH-SPIQLLTLRPQYG 512
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A0E0HM12_ORYNI (Uncharacterized protein n=8 Tax=Oryza TaxID=4527 RepID=A0A0E0HM12_ORYNI) HSP 1 Score: 128 bits (322), Expect = 3.350e-28 Identity = 90/272 (33.09%), Postives = 123/272 (45.22%), Query Frame = 2
Query: 428 VTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRCIGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVW-ENAAAYDPSRWQRYVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPVRPHHIVTLLPRDGVLPLVI 1240
+T+ I D+ TFF AGH+TT++LLTW + LL HPEWQ + R EV+ CGG G T NG + L++LKL+ VLYETLRLY P LM R EL G+ +P GT + + +H VW A +DP R++ V + H A L+F G RSCIG++FAM+EA +LRR+ F P P +TL P+ G LP+++
Sbjct: 321 MTMDEIVDECKTFFFAGHDTTSHLLTWAMFLLGTHPEWQHRLREEVLRECGGGGDTEALPNGDA---------------------------------------------------LNKLKLMTMVLYETLRLYGPVSLMART-ATADAELG-GVRVPKGTMTMIPMAILHRDADVWGAGAGEFDPLRFRGGVNKAAA---------HAGALLAFSLGQRSCIGQDFAMMEAKTTLAMILRRFAFEVSPEYVHA-PLDYLTLQPQCG-LPIIL 528
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Match: A0A835WKL7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WKL7_9CHLO) HSP 1 Score: 129 bits (325), Expect = 4.150e-28 Identity = 95/288 (32.99%), Postives = 129/288 (44.79%), Query Frame = 2
Query: 416 DGPQVTVKSIRDQALTFFMAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSRAXXXXXXXXXXXXXXXXXXXXXXNTEETGSKKNGFPNHNGDEGGDVTLPRLDRLKLLRAVLYETLRLYPPAPLMGRC------IGPGGLELHPGLVLPAGTTAAVDVYAIHTSEKVWENAAAYDPSRWQR---------YVGETVMGGVRFNGEKHQYAFLSFGAGSRSCIGRNFAMLEAHVLAVELLRRYRFAEPPSGTPV--RPHHIVTLLPRDGVL 1228
DG ++ ++RD+ +T +AG ET+A LL W LLA HPE Q A AEV+ VCG G + G T + + L +V+ ETLRLY PA ++GRC +GP VLPAGTT V Y +H +VWE A+ P RWQ Y+G +M + NG A+L FG G R+CIG FAM+EA ++ +L+RY A PP G+ +P ++TL P VL
Sbjct: 530 DGSGMSDTALRDELMTLLVAGQETSAILLGWASALLAAHPEVQAAAAAEVLAVCG-----------------------------------------------------GPDAGPPTPASVRHMPYLESVVLETLRLYSPAYMVGRCARRDAALGP--------YVLPAGTTVLVSPYVMHRDPEVWEQPEAFRPERWQELQNREGYAGYMG--LMSNLGPNG-----AYLPFGGGPRNCIGTGFAMMEALLVLAAVLQRYSLALPPGGSSSFPKPKPLLTLRPEAVVL 749 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7061.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7061.1.1 >prot_P-wetherbeei_contig7061.1.1 ID=prot_P-wetherbeei_contig7061.1.1|Name=mRNA_P-wetherbeei_contig7061.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp MAGHETTANLLTWTLLLLARHPEWQEKARAEVIEVCGGVGGTSGKQNGSSback to top mRNA from alignment at P-wetherbeei_contig7061:959..2551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7061.1.1 ID=mRNA_P-wetherbeei_contig7061.1.1|Name=mRNA_P-wetherbeei_contig7061.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig7061:959..2551- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7061:959..2551- >mRNA_P-wetherbeei_contig7061.1.1 ID=mRNA_P-wetherbeei_contig7061.1.1|Name=mRNA_P-wetherbeei_contig7061.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig7061:959..2551- (Phaeothamnion wetherbeei SAG_119_79)back to top |