mRNA_P-wetherbeei_contig7059.2.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A6H5JIJ1_9PHAE (DUF4205 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ1_9PHAE) HSP 1 Score: 224 bits (572), Expect = 7.780e-64 Identity = 147/313 (46.96%), Postives = 186/313 (59.42%), Query Frame = 1
Query: 85 ITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAA-FDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTE---------PRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
+T +A +RE++FG+ K FN AW +QGF F L YGLVQ +GGPCGV+A VQAFL+ DM+ D + W NP +R +L AL+TIIW + AVLAV A P RY+PD TERL L S + LE +L + H+T +G G +LLV SC+ SRG+ A GD D + + EPP LMA HGYA+QEL+NLLL+GRA SNVFDG R M D + G +G GG G E +K G G + EG+ G GD +VL G+ RGRVGFLTLFEAYK++ VGD P
Sbjct: 304 VTEVQANGVRELVFGNPSKRFNDAWREQGFFFCGEEFLRYGLVQVKGGPCGVLAAVQAFLLEDMIFGDC------AGCDWRNPKKSQREHSLTSALSTIIWRAGDGNTAVLAVSEGGATVQPSSRYRPDGFTERLKLIRVGSRSALEGVLRDNLHHYTNYKVTWGPCMKKGQGVILLVYSCVFSRGVDAVRGDMDNSFD-EPPPLMASHGYASQELVNLLLVGRARSNVFDGCRVMGD-EGGGSKAGAGGK-KGYEDRKRGQKQGHQKE-EGEGGGGDR-VVLTGVSERGRVGFLTLFEAYKHVEVGDRLKNP 605
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: D8LK40_ECTSI (DUF4205 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK40_ECTSI) HSP 1 Score: 223 bits (567), Expect = 5.260e-63 Identity = 139/306 (45.42%), Postives = 179/306 (58.50%), Query Frame = 1
Query: 85 ITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAA-FDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGT--CVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
+T +A +RE++FG+ K FN AW +QGF F L YGLVQ EGGPCGV+A VQAF++ D++ D + W NP +R +L AL+TIIW + AVLAV A RY+PD TER+ L S + LE ++ + H+T +G G +LLV SC+ SRG+ A GD D + + EP LMA HGYA+QEL+NLLL+GRA SNVFDG R M + G +G GG C E + G E G GD +VLRG+ RGRVGFLTLFEAYK++ VGD P
Sbjct: 332 VTEVQANGVRELVFGNPSKRFNDAWREQGFFFCGEDFLRYGLVQAEGGPCGVLAAVQAFVLEDLIFGDC------AGCDWRNPKKSQRERSLTSALSTIIWSAGDGNTAVLAVSEGGATVQRSSRYRPDGFTERVKLIHVGSRSALEGVVRDNLHHYTNRKGQGVILLVYSCVFSRGVDAVRGDMDNSFD-EPSPLMASHGYASQELVNLLLVGRARSNVFDGCRVMGG-EGGGAKAGAGGKEGCEDGERGQK-----QGHQKEEDEGGGDDRVVLRGVSERGRVGFLTLFEAYKHVEVGDRLKNP 624
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A1V9ZSF2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSF2_9STRA) HSP 1 Score: 182 bits (461), Expect = 6.530e-49 Identity = 113/303 (37.29%), Postives = 152/303 (50.17%), Query Frame = 1
Query: 85 ITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAAFDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
+ +AE +R++LFG +K+ W QGF F PG YG+VQHEGGPCGV+AVVQA+++ + + + SW NP+P + AL+ ALA IIW +A+ A +++ + S A D + R+AA F E RG+G VLLV S LL+RG A A D D A + P L+ H Y QE++NLLL+G A SNVFDG + + D G+VLRGI +G VGFLTLFEAY+Y+ VGD TP
Sbjct: 270 VGSAEMASIRQLLFGAAKKSLTPHWTAQGFPFASAPG--YGIVQHEGGPCGVMAVVQAYMLRSLFSN--------APGSWQNPTPDQLSRALVDALAHIIWQAGDDKGCCVALQGA-----------QRTMDQVRVSTLASRAAARDFIERNAAEFAEARGFGVVLLVLSVLLTRGPATVAADMD-APDGATPTLIGAHDYCTQEIVNLLLVGYACSNVFDGTQDLGD-----------------------------------------GLVLRGIAHQGPVGFLTLFEAYEYMVVGDHLKTP 509
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A7S2R941_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R941_9STRA) HSP 1 Score: 174 bits (442), Expect = 7.270e-47 Identity = 107/309 (34.63%), Postives = 155/309 (50.16%), Query Frame = 1
Query: 82 PITAAEAVRLREILFGDTR-KTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAAFDPPP----RYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
PI+ +A +++++F D + F+ +W QGF F + L YGLVQ +GGPCGV+A VQAF++ +L +++W NP+ R + ALI AL TIIW A L + P Y+ D V +++ ++ S A L L+ H F + G G V+L+TS +LSRG D D A+ + L+ H YA QEL+NL+L+G A SNVFDG R + + D + +VLRGI +G+VGFLTLFE Y+++ VG F TP
Sbjct: 145 PISLEQAKLVKKLVFADRKPNVFDVSWKNQGFFFQSIQDLKYGLVQVKGGPCGVIAAVQAFVLKALLFGSK------KAQNWENPTRREQVDALIDALCTIIWQAGGNRQARLCIHVPDLTGPASCSSRDYRADGVIDKMLVYATTSKAQLSSLVEEHIGLFMQKSGPGTVMLLTSLILSRGGVNIKNDFDSAILGDGISLIGNHNYAGQELVNLMLVGYACSNVFDGTRSLSEDDDS--------------------------------------VVLRGIQGQGKVGFLTLFEHYEHVQVGAFLKTP 409
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A024TXR9_9STRA (Myb-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXR9_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.990e-46 Identity = 115/308 (37.34%), Postives = 155/308 (50.32%), Query Frame = 1
Query: 82 PITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWH-GRSRSNAVLAVPYAAAFDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGG---IVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
P+ AAE LR++LF DT K ++ W QGF F+ V GL YG+VQHEGGPCGV+AVVQA+++ + ED S +W +P++ AL +ALA IIW G S V +P +++ + + LE L + F +GYGAVL+V S +L+RGLA D D A P L+ H Y QE++NLLL+G A SNVFDG + + GDGG +VLRG+ +R VGFLTLFEAY Y+ VGD + +P
Sbjct: 344 PLPAAEVAALRKLLFNDTTKRLSSHWTHQGFAFSQVEGLKYGIVQHEGGPCGVMAVVQAYVLYYLFKED--------SATWDAVTPQQATTALTQALAHIIWQAGTGGSCKVALIPGETP-----------ALDQIAVVQLNTRRELELYLTANIEQFRASKGYGAVLVVASVMLTRGLATIEADMDAAT-GTVPTLIGAHDYCTQEMVNLLLVGYACSNVFDGAKDLG---------------------------------------GDGGSTSMVLRGVQKRSVVGFLTLFEAYDYMVVGDHFKSP 592
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: W4FMJ3_9STRA (Myb-like domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FMJ3_9STRA) HSP 1 Score: 175 bits (444), Expect = 5.670e-46 Identity = 114/303 (37.62%), Postives = 149/303 (49.17%), Query Frame = 1
Query: 85 ITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAAFDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
+ AAE LR++LF D++K W QGF F V GL YG+VQHEGGPCGV+AVVQA+++ L ++DI T W + AL +ALA IIW S S +A+ A E + + S L+ + RH F E +GYG VL+V S +L+RGLA D D A P L+ H Y QE++NLLL+G A SNVFDG + + D A +S +VLRG+ +R VGFLTLFEAY Y+ VGD P
Sbjct: 354 LPAAEVTSLRKLLFNDSKKKLGPHWTHQGFDFAQVEGLKYGIVQHEGGPCGVMAVVQAYVL-HFLFQEDIST-------WDSVETPLVTKALARALAHIIWQAGSGSTCKVALIGGAT----------PSLEHMAVSQLNSRHDLDQFIARHIDQFRESKGYGVVLVVASVMLTRGLATVEADMDTAT-GTVPTLIGAHDYCTQEMVNLLLLGYACSNVFDGTKDLGGGDDATSSS----------------------------------MVLRGVQKRSAVGFLTLFEAYDYMVVGDHLKVP 603
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A485LCZ2_9STRA (Aste57867_18987 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCZ2_9STRA) HSP 1 Score: 174 bits (442), Expect = 8.770e-46 Identity = 109/303 (35.97%), Postives = 150/303 (49.50%), Query Frame = 1
Query: 85 ITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAAFDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
+ AAE LR++LF D +K ++ W QGF F+ VPGL YG++QHEGGPCGV+AVVQ +++ +L + ++ N +P + AL++AL IIW + +A+ + + + + S LE + H F E +GYG VLLV S +LSRGLA GD D A P L+ H Y QE++NLLL+G A SNVFDG + + GD ++LRGI +RG VGFLTLFEAY Y+ VGD P
Sbjct: 334 LPAAEVAALRKLLFNDPKKKLSSHWTHQGFPFSTVPGLGYGIIQHEGGPCGVMAVVQGYVLFYLLKDGSVD----------NATPSQLQKALVQALTHIIWQAANGLACKVALT---------DHTGTPSLDHMVVSQLQSRHDLEQFVSSHVDQFAEAKGYGVVLLVASVMLSRGLAIIEGDMDTATGIVPT-LIGNHDYCTQEMVNLLLVGYAASNVFDGFKDLG-------------------------------------GDAGDAMLLRGIQKRGLVGFLTLFEAYDYMVVGDHLKVP 579
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A7S2RM61_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM61_9STRA) HSP 1 Score: 172 bits (436), Expect = 2.210e-45 Identity = 113/328 (34.45%), Postives = 161/328 (49.09%), Query Frame = 1
Query: 76 PLPITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWH----------------GRSRSNAVLAVPYAAA-FDPPPRYKPDSVTERLWLHMAPSL-----AVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
P ++A++A L+ +LFG+ R+TF AW QQGF F+ L YGLVQH+GGPCGV+A V A +I +++ + W+NPS R + AL+ +LA I+W G ++ A L VP+ ++ D P Y+PD VT+RL L + A +ED H T +G GA+ L+ + + SRG+ D D+ E L+ HGY +QE +NLLL+G A+SNVFDG R + D G++ + L G+P R VGFLTL EAY Y VG + P
Sbjct: 221 PESLSASDAGALQSLLFGERRRTFPPAWKQQGFVFSKSRDLGYGLVQHQGGPCGVLAAVNAHIIAELVR---------TMARWTNPSERAQQDALVASLARILWRCASAPRSSRAAASAASGDRQNTACLCVPWGSSGTDRGPGYQPDGVTDRLRLIQGLTCEEEVRAAIED----HLDALTASKGRGAIALLAAAIYSRGIDRVRTDMDEGFAGETRSLLDHHGYLSQEGVNLLLVGTASSNVFDGHRTLHDE------------VQGTQDT----------------------VTLGGVPERSEVGFLTLHEAYNYFQVGKNFKEP 501
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A2G8JW86_STIJA (Ubiquitin carboxyl-terminal hydrolase MINDY n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JW86_STIJA) HSP 1 Score: 162 bits (411), Expect = 2.840e-43 Identity = 107/306 (34.97%), Postives = 149/306 (48.69%), Query Frame = 1
Query: 82 PITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAA-FDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEG-KCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
P+T +A L+ ++FG FN W++QGF FND P L +G+VQH+GG CGV+A VQA + ++L DD S P R ++ L KALA I+W S +L++P F RYK DS+TE L L+ SL LE+ L + F P G G V+ + S + S+ L + D+ LM H Y QE++NL+L GRA SNVF+ + +D SG G KC +L+G+ +R VG L+LFE Y VG +Y TP
Sbjct: 49 PLTLKKASELKSLIFGSPSGCFNEEWMKQGFPFNDRPDLEFGIVQHKGGSCGVLASVQACFLQNLLFMDD----RIISPGDLRPGKREQNKCLAKALAKILWQCGSEKRVILSMPSGKVQFTTGGRYKGDSLTETLMLYHFTSLPDLEEYLNVNIGFFINPTGNGVVVFLYSVIFSKSLEGIIDEMDEPTNQ----LMGHHNYCTQEMVNLILTGRAVSNVFNDIMELD-------------------------------SGTGPKC-------ILKGLNKRSDVGLLSLFEHYGSCKVGSYYKTP 308
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Match: A0A1S3IP19_LINUN (Ubiquitin carboxyl-terminal hydrolase MINDY n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IP19_LINUN) HSP 1 Score: 164 bits (414), Expect = 1.630e-41 Identity = 109/305 (35.74%), Postives = 151/305 (49.51%), Query Frame = 1
Query: 82 PITAAEAVRLREILFGDTRKTFNTAWLQQGFCFNDVPGLAYGLVQHEGGPCGVVAVVQAFLIGDMLAEDDIETTEPSSESWSNPSPRRRHAALIKALATIIWHGRSRSNAVLAVPYAAA-FDPPPRYKPDSVTERLWLHMAPSLAVLEDLLLRHAAHFTEPRGYGAVLLVTSCLLSRGLAAAAGDPDQALEAEPPCLMARHGYAAQELINLLLIGRATSNVFDGVRRMDDTDSAGCASGGGGTCVGSECKKCGGGGGSGRSGEGKCGDGDGGIVLRGIPRRGRVGFLTLFEAYKYLHVGDFYTTP 993
PI AV L+ ++FG K FN WL Q F F+D P L YG+VQ +GGPCGV+A VQA ++ +ML + T+P+S+S PS + R A L A++ I+W + AV+ +P + F RYKPD+VTE L L++ + L + + +H F G VL S +LSR + D D LM HGY +QEL+NL+L G+A SNVF+ +D SG G ++L+GI R +G L+LFE YK VG F TP
Sbjct: 459 PIDIQTAVELKTVIFGTASKFFNDEWLYQSFTFSDQPRLQYGIVQKKGGPCGVLAAVQAMVLQEMLFNKE---TKPTSDSLE-PSRKERTACLAAAISAILWRAGQQKEAVVTLPCGRSIFAGSGRYKPDNVTETLVLNIFSTQEELHEFIKQHINTFELEGSTGVVLFTYSLILSRTIPELKSDMDVPTNT----LMGAHGYCSQELVNLILTGKAASNVFNDKVELD-------------------------------SGTGPK------MILKGIHARSDIGLLSLFEHYKSCEVGTFLKTP 718 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7059.2.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7059.2.4 >prot_P-wetherbeei_contig7059.2.4 ID=prot_P-wetherbeei_contig7059.2.4|Name=mRNA_P-wetherbeei_contig7059.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=331bp GGGGGGGSCNGSYRNASSSSSSSSPPLPITAAEAVRLREILFGDTRKTFNback to top mRNA from alignment at P-wetherbeei_contig7059:1885..3208+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7059.2.4 ID=mRNA_P-wetherbeei_contig7059.2.4|Name=mRNA_P-wetherbeei_contig7059.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1324bp|location=Sequence derived from alignment at P-wetherbeei_contig7059:1885..3208+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7059:1885..3208+ >mRNA_P-wetherbeei_contig7059.2.4 ID=mRNA_P-wetherbeei_contig7059.2.4|Name=mRNA_P-wetherbeei_contig7059.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig7059:1885..3208+ (Phaeothamnion wetherbeei SAG_119_79)back to top |