mRNA_P-wetherbeei_contig7033.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A836CPD6_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD6_9STRA) HSP 1 Score: 368 bits (944), Expect = 3.790e-120 Identity = 184/324 (56.79%), Postives = 237/324 (73.15%), Query Frame = 1
Query: 202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGV-LLQCKKCFRWL-HNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNS-----LSGAAALVVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
A ILCCLCGKSIQPN A +C ECL VD+TE I + G+ + QC+KC RW N+ +V C+LES ELLA+CLKRI GL+K D+VDA+F+WTEPHS R+KV+ T++R+VLNGV +QQ+ +VE VV+W+QC DC REF NQTW+A VQVRQRVDHKRTF YLEQL+L NA VD+ +DG+DFFF+++AHA+ F ++L VP R +KK+VS+D+HSN+ N Q S+ VD+VPLC+ DLVV+P G G L+G +LV VTSV+ L+DPTTL AEL D+FWR+P+ PL + +L EF VLDVEPV
Sbjct: 4 AHLGAILCCLCGKSIQPNSAALCGECLRAEVDITENIQEKGLKVYQCRKCLRWQGKNDHYVPCQLESLELLALCLKRIPGLSKADIVDAAFVWTEPHSMRIKVKLTLKRDVLNGVMLQQEK------VVEFVVQWRQCSDCNREFTNQTWKAVVQVRQRVDHKRTFFYLEQLILAANAQHRAVDIRSLKDGMDFFFAERAHALQFADWLAGVVPQRSTKSKKLVSVDNHSNISNEQLSLRVDIVPLCKGDLVVVPAGGGKGGGAAHLAGCVSLVANVTSVVQLLDPTTLRSAELTPDRFWRSPLTPLASASSLIEFTVLDVEPV 321
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: D7G1R1_ECTSI (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R1_ECTSI) HSP 1 Score: 338 bits (866), Expect = 1.030e-107 Identity = 172/316 (54.43%), Postives = 221/316 (69.94%), Query Frame = 1
Query: 214 TILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGV-LLQCKKCFRWL-HNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 1155
TILCCLCG+ IQPNGANMC CL VDVTEGI K G+ ++QC++C +WL N+ W ELES LA+ LK+I GL K DLVDA +IWTEPHSKR+KVR TVR+EVLN V +QQ A VE VV +QC C +EF NQTW+A VQ+RQR HKRT + LEQ +L+ +A + C+ ++ R G+D +F K AV F +L + P R + + K+VS D+HSNV N QH++AVD+ LCR+DLV LPRGSGN L G +V RVTSV+ V P++ A++PAD++WR+P PLL+ +L EFVVLD EP D
Sbjct: 62 TILCCLCGRPIQPNGANMCGACLRDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWTEPHSKRLKVRITVRKEVLNKVMLQQDAT------VEFVVHNRQCNVCNKEFTNQTWKAIVQIRQRAGHKRTMMLLEQRILQADAHRKCISVETVRGGMDVYFGAKHDAVEFVGYLSSVAPIRSRESTKLVSTDNHSNVRNTQHTVAVDVPTLCRDDLVALPRGSGNRLQGTITVVQRVTSVVQFVGPSSGQTADMPADRYWRSPPEPLLSASSLTEFVVLDSEPAD 371
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA) HSP 1 Score: 311 bits (796), Expect = 7.370e-98 Identity = 156/322 (48.45%), Postives = 213/322 (66.15%), Query Frame = 1
Query: 196 PKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 1155
P+ E ILCC+C I+ N ANMC CL VDVTEGI K ++ QC+ C +W QWV +LES ELLA+CLK+I GLNK LVDA +IWTEPHSKR+K++ TV++EV+NG +QQ S +V +VR QQC DC F N +W+A VQVRQ+V+HKRTF +LEQL+L+ + ++ Q DGVDFFF ++ HA+ F +FL VP +K KK++S D+HSN N + + AVD+ P+C++DLV LP L ++L V +VTS +H++DP T+ RAE+ DK+WR P L + K L E+ VLD P++
Sbjct: 5 PEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLE 319
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 307 bits (786), Expect = 2.060e-96 Identity = 154/315 (48.89%), Postives = 211/315 (66.98%), Query Frame = 1
Query: 217 ILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 1155
ILCC+C I+ N ANMC CL VDVTEGI K ++ QC+ C +W QWV ELES ELLA+CLK+I GLNK LVDA +IWTEPHSKR+K++ TV++EV+NG +QQ S +V +VR QQC +C F N +W+A VQVRQ+V+HKRTF YLEQL+L+ + +++ Q DGVDFFF ++ HA+ F +FL VP +K KK++S D+HSN N + + AVD+ P+C++DLV LP L ++L V +VTS +H++DP T+ RAE+ +K+WR P L + K L E+ VLD P++
Sbjct: 11 ILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPME 318
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 307 bits (786), Expect = 2.180e-96 Identity = 155/319 (48.59%), Postives = 216/319 (67.71%), Query Frame = 1
Query: 202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
++ TILCC+C I N AN C CL + VDVTEGI K ++ QC+ C RW WV ELES ELLA+CLK+I+ LN+ L+DA++IWTEPHS+R+K++ TV++EV++ + MQQ S +V VVR QQC C F NQ+WRA VQVRQRVDHKRTF +LEQL+L+ A + +++ DGVDFFFS++ HA+ F +FL +VP +VK KK++S D+HSN HN + + AV++ P+C++DLV+LP L + L V VTS +H+VDP T AE+ ++K+WR P L ++KA+ +F VLD P+
Sbjct: 6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM 317
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A484E8L1_BRELC (60S ribosomal export protein NMD3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8L1_BRELC) HSP 1 Score: 306 bits (784), Expect = 4.470e-96 Identity = 154/318 (48.43%), Postives = 215/318 (67.61%), Query Frame = 1
Query: 205 EYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
+ TILCCLC I N AN C CL + VDVTEGI+K ++ QC+ C RW WV ELES ELLA+CLK+I+ LN+ L+DA+++WTEPHS+R+K++ TV++EVL+ + MQQ S +V VVR QQC C F NQ+WRA VQVRQRVDHKRTF YLEQL+L+ A + ++ DGVDFFFS++ HA+ F +FL +VP ++K KK++S D+HSN HN + + AV++ P+C++DLVVLP L + L V VTS +H+VDP + AE+ ++K+WR P L ++K +++F +LD P+
Sbjct: 4 QMPTILCCLCATPIVANAANTCVNCLKSQVDVTEGINKEIIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFYLEQLILKHRAHEKTTTIESHPDGVDFFFSERNHALRFIDFLQESVPMKLKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPLKLARMLGNISCLCLVASVTSSIHVVDPFSTQVAEVDSEKYWRYPFRALRSIKTMSDFTILDSNPM 314
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A316UBA1_9BASI (60S ribosomal export protein NMD3 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UBA1_9BASI) HSP 1 Score: 308 bits (788), Expect = 5.370e-96 Identity = 152/320 (47.50%), Postives = 220/320 (68.75%), Query Frame = 1
Query: 199 KAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQ-WVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVV--RVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEP 1149
K + +LC CG +I PN AN+C CL +VD+TEGI K + CK C R+L+ Q WV +LES ELLA+CLK++ GLNK L+DA FIWTEPHSKR++V+ TV++EVL +QQ VE VV++ QCPDC R TW+A+VQVRQ+V HKRTFLYLEQL+L+ NA K +++ ++DG+DF+F Q++HAV EFL + VP RV + ++SMD HS+ NN+ + +V++ P+C++DLV LP+ + +L +V+ R+T+ + +DP+TL A++PA+K++R P+ PL + L EF+VLD+EP
Sbjct: 11 KLDQGLVLCADCGTAIPPNSANLCISCLRNSVDITEGIPKQATVNFCKNCERYLNPPQSWVLAQLESRELLAICLKKLRGLNKVRLIDAGFIWTEPHSKRLRVKLTVQKEVLVNTILQQVFE------VEYVVQYGQCPDCTRLAAKNTWKAQVQVRQKVPHKRTFLYLEQLILKHNAHKDTINISEKKDGLDFYFVQRSHAVKMCEFLASVVPIRVTASSSVISMDIHSSTSNNKFTYSVEIAPICKDDLVCLPKSTAKALGQLPQVVLCSRITNSIRFLDPSTLHYADIPAEKYFRDPIQPLCAIPELVEFLVLDIEP 324
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 305 bits (782), Expect = 8.190e-96 Identity = 154/321 (47.98%), Postives = 209/321 (65.11%), Query Frame = 1
Query: 196 PKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
P+ ILCC+C I+ N ANMC CL VDVTEGI K ++ QC+ C +W WV ELES ELLA+CLK+I GLNK LVDA ++WTEPHSKR+K++ TV++EV+NG +QQ S +V +VR QQC +C F N +W+A VQVRQ+VDHKRTF YLEQL+L+ + ++ DGVDFFF ++ HA+ F +FL VP ++K KK++S D+HSN N + + AVDL +C++DLV LP L ++L V +VTS +H++DP T+ RAE+ DK+WR P L + K L E+ VLD P+
Sbjct: 5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPL 318
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 305 bits (781), Expect = 1.290e-95 Identity = 155/319 (48.59%), Postives = 215/319 (67.40%), Query Frame = 1
Query: 202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
++ TILCC+C I N AN C CL + VDVTEGI K ++ QC+ C RW WV ELES ELLA+CLK+I+ LN+ L+DA++IWTEPHS+R+K++ TV++EVL+ + MQQ S +V VVR QQC C F NQ+WRA VQVRQRVDHKRTF +LEQL+L+ A + +++ DGVDFFFS++ HA+ F +FL +VP +VK KK++S D+HSN HN + + AV++ P+C++DLV+LP L + L V VTS +H+VDP T AE+ ++K+WR P L ++KA+ + VLD P+
Sbjct: 6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM 317
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A316UYV2_9BASI (60S ribosomal export protein NMD3 n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UYV2_9BASI) HSP 1 Score: 306 bits (785), Expect = 1.430e-95 Identity = 154/324 (47.53%), Postives = 221/324 (68.21%), Query Frame = 1
Query: 202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQ-WVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVV--RVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVDPAA 1164
AE +LC CG +I PN AN+C CL +VD+TEGI K + CK C R+L+ Q WV +LES ELLA+CL+++ GLNK L+DA FIWTEPHSKR++V+ TV++EVL +QQ VE +V++ QCPDC R TW+A+VQVRQ+V HKRTFLYLEQL+L+ NA K +++ ++DG+DF+++Q+AHAV EFL + VP +V + ++SMD HS+ NN+ + +V++ P+C++DL+ LP+ SL LV+ R+T+ + L+DP TL A++PA+K++R P L T+ L EF+VLD+EP AA
Sbjct: 11 AEQGLVLCADCGTAIPPNSANLCLSCLRNSVDITEGIPKQATVNFCKNCERYLNPPQTWVMAQLESRELLAICLRKLRGLNKVRLIDAGFIWTEPHSKRLRVKLTVQKEVLISTILQQIFE------VEYIVQYGQCPDCTRLAAKNTWKAQVQVRQKVPHKRTFLYLEQLILKHNAHKDTINISEKKDGLDFYYTQRAHAVKMCEFLASVVPVKVTSSTSVISMDIHSSTSNNKFTYSVEIAPICKDDLICLPKNVAKSLGQLPQLVLCSRITNSIRLMDPVTLHYADIPAEKYFRDPFQALCTIPELVEFLVLDIEPSTHAA 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7033.1.2 >prot_P-wetherbeei_contig7033.1.2 ID=prot_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp MLFLGGKETGKNHKGEISNTTPHTQPATSPSGLQTSVSHRVLSVAERTRAback to top mRNA from alignment at P-wetherbeei_contig7033:15..2958+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7033.1.2 ID=mRNA_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2944bp|location=Sequence derived from alignment at P-wetherbeei_contig7033:15..2958+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7033:15..2958+ >mRNA_P-wetherbeei_contig7033.1.2 ID=mRNA_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1239bp|location=Sequence derived from alignment at P-wetherbeei_contig7033:15..2958+ (Phaeothamnion wetherbeei SAG_119_79)back to top |