mRNA_P-wetherbeei_contig7033.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7033.1.2
Unique NamemRNA_P-wetherbeei_contig7033.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A836CPD6_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD6_9STRA)

HSP 1 Score: 368 bits (944), Expect = 3.790e-120
Identity = 184/324 (56.79%), Postives = 237/324 (73.15%), Query Frame = 1
Query:  202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGV-LLQCKKCFRWL-HNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNS-----LSGAAALVVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
            A    ILCCLCGKSIQPN A +C ECL   VD+TE I + G+ + QC+KC RW   N+ +V C+LES ELLA+CLKRI GL+K D+VDA+F+WTEPHS R+KV+ T++R+VLNGV +QQ+       +VE VV+W+QC DC REF NQTW+A VQVRQRVDHKRTF YLEQL+L  NA    VD+   +DG+DFFF+++AHA+ F ++L   VP R   +KK+VS+D+HSN+ N Q S+ VD+VPLC+ DLVV+P G G       L+G  +LV  VTSV+ L+DPTTL  AEL  D+FWR+P+ PL +  +L EF VLDVEPV
Sbjct:    4 AHLGAILCCLCGKSIQPNSAALCGECLRAEVDITENIQEKGLKVYQCRKCLRWQGKNDHYVPCQLESLELLALCLKRIPGLSKADIVDAAFVWTEPHSMRIKVKLTLKRDVLNGVMLQQEK------VVEFVVQWRQCSDCNREFTNQTWKAVVQVRQRVDHKRTFFYLEQLILAANAQHRAVDIRSLKDGMDFFFAERAHALQFADWLAGVVPQRSTKSKKLVSVDNHSNISNEQLSLRVDIVPLCKGDLVVVPAGGGKGGGAAHLAGCVSLVANVTSVVQLLDPTTLRSAELTPDRFWRSPLTPLASASSLIEFTVLDVEPV 321          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: D7G1R1_ECTSI (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R1_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 1.030e-107
Identity = 172/316 (54.43%), Postives = 221/316 (69.94%), Query Frame = 1
Query:  214 TILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGV-LLQCKKCFRWL-HNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 1155
            TILCCLCG+ IQPNGANMC  CL   VDVTEGI K G+ ++QC++C +WL  N+ W   ELES   LA+ LK+I GL K DLVDA +IWTEPHSKR+KVR TVR+EVLN V +QQ A       VE VV  +QC  C +EF NQTW+A VQ+RQR  HKRT + LEQ +L+ +A + C+ ++  R G+D +F  K  AV F  +L +  P R + + K+VS D+HSNV N QH++AVD+  LCR+DLV LPRGSGN L G   +V RVTSV+  V P++   A++PAD++WR+P  PLL+  +L EFVVLD EP D
Sbjct:   62 TILCCLCGRPIQPNGANMCGACLRDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWTEPHSKRLKVRITVRKEVLNKVMLQQDAT------VEFVVHNRQCNVCNKEFTNQTWKAIVQIRQRAGHKRTMMLLEQRILQADAHRKCISVETVRGGMDVYFGAKHDAVEFVGYLSSVAPIRSRESTKLVSTDNHSNVRNTQHTVAVDVPTLCRDDLVALPRGSGNRLQGTITVVQRVTSVVQFVGPSSGQTADMPADRYWRSPPEPLLSASSLTEFVVLDSEPAD 371          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA)

HSP 1 Score: 311 bits (796), Expect = 7.370e-98
Identity = 156/322 (48.45%), Postives = 213/322 (66.15%), Query Frame = 1
Query:  196 PKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 1155
            P+ E   ILCC+C   I+ N ANMC  CL   VDVTEGI K  ++ QC+ C +W    QWV  +LES ELLA+CLK+I GLNK  LVDA +IWTEPHSKR+K++ TV++EV+NG  +QQ      S +V  +VR QQC DC   F N +W+A VQVRQ+V+HKRTF +LEQL+L+    +    ++ Q DGVDFFF ++ HA+ F +FL   VP  +K  KK++S D+HSN  N + + AVD+ P+C++DLV LP      L   ++L  V +VTS +H++DP T+ RAE+  DK+WR P   L + K L E+ VLD  P++
Sbjct:    5 PEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLE 319          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.060e-96
Identity = 154/315 (48.89%), Postives = 211/315 (66.98%), Query Frame = 1
Query:  217 ILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 1155
            ILCC+C   I+ N ANMC  CL   VDVTEGI K  ++ QC+ C +W    QWV  ELES ELLA+CLK+I GLNK  LVDA +IWTEPHSKR+K++ TV++EV+NG  +QQ      S +V  +VR QQC +C   F N +W+A VQVRQ+V+HKRTF YLEQL+L+    +   +++ Q DGVDFFF ++ HA+ F +FL   VP  +K  KK++S D+HSN  N + + AVD+ P+C++DLV LP      L   ++L  V +VTS +H++DP T+ RAE+  +K+WR P   L + K L E+ VLD  P++
Sbjct:   11 ILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPME 318          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 307 bits (786), Expect = 2.180e-96
Identity = 155/319 (48.59%), Postives = 216/319 (67.71%), Query Frame = 1
Query:  202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
            ++  TILCC+C   I  N AN C  CL + VDVTEGI K  ++ QC+ C RW     WV  ELES ELLA+CLK+I+ LN+  L+DA++IWTEPHS+R+K++ TV++EV++ + MQQ      S +V  VVR QQC  C   F NQ+WRA VQVRQRVDHKRTF +LEQL+L+  A +   +++   DGVDFFFS++ HA+ F +FL  +VP +VK  KK++S D+HSN HN + + AV++ P+C++DLV+LP      L   + L  V  VTS +H+VDP T   AE+ ++K+WR P   L ++KA+ +F VLD  P+
Sbjct:    6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM 317          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A484E8L1_BRELC (60S ribosomal export protein NMD3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8L1_BRELC)

HSP 1 Score: 306 bits (784), Expect = 4.470e-96
Identity = 154/318 (48.43%), Postives = 215/318 (67.61%), Query Frame = 1
Query:  205 EYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
            +  TILCCLC   I  N AN C  CL + VDVTEGI+K  ++ QC+ C RW     WV  ELES ELLA+CLK+I+ LN+  L+DA+++WTEPHS+R+K++ TV++EVL+ + MQQ      S +V  VVR QQC  C   F NQ+WRA VQVRQRVDHKRTF YLEQL+L+  A +    ++   DGVDFFFS++ HA+ F +FL  +VP ++K  KK++S D+HSN HN + + AV++ P+C++DLVVLP      L   + L  V  VTS +H+VDP +   AE+ ++K+WR P   L ++K +++F +LD  P+
Sbjct:    4 QMPTILCCLCATPIVANAANTCVNCLKSQVDVTEGINKEIIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFYLEQLILKHRAHEKTTTIESHPDGVDFFFSERNHALRFIDFLQESVPMKLKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPLKLARMLGNISCLCLVASVTSSIHVVDPFSTQVAEVDSEKYWRYPFRALRSIKTMSDFTILDSNPM 314          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A316UBA1_9BASI (60S ribosomal export protein NMD3 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UBA1_9BASI)

HSP 1 Score: 308 bits (788), Expect = 5.370e-96
Identity = 152/320 (47.50%), Postives = 220/320 (68.75%), Query Frame = 1
Query:  199 KAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQ-WVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVV--RVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEP 1149
            K +   +LC  CG +I PN AN+C  CL  +VD+TEGI K   +  CK C R+L+  Q WV  +LES ELLA+CLK++ GLNK  L+DA FIWTEPHSKR++V+ TV++EVL    +QQ         VE VV++ QCPDC R     TW+A+VQVRQ+V HKRTFLYLEQL+L+ NA K  +++  ++DG+DF+F Q++HAV   EFL + VP RV  +  ++SMD HS+  NN+ + +V++ P+C++DLV LP+ +  +L     +V+  R+T+ +  +DP+TL  A++PA+K++R P+ PL  +  L EF+VLD+EP
Sbjct:   11 KLDQGLVLCADCGTAIPPNSANLCISCLRNSVDITEGIPKQATVNFCKNCERYLNPPQSWVLAQLESRELLAICLKKLRGLNKVRLIDAGFIWTEPHSKRLRVKLTVQKEVLVNTILQQVFE------VEYVVQYGQCPDCTRLAAKNTWKAQVQVRQKVPHKRTFLYLEQLILKHNAHKDTINISEKKDGLDFYFVQRSHAVKMCEFLASVVPIRVTASSSVISMDIHSSTSNNKFTYSVEIAPICKDDLVCLPKSTAKALGQLPQVVLCSRITNSIRFLDPSTLHYADIPAEKYFRDPIQPLCAIPELVEFLVLDIEP 324          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 305 bits (782), Expect = 8.190e-96
Identity = 154/321 (47.98%), Postives = 209/321 (65.11%), Query Frame = 1
Query:  196 PKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
            P+     ILCC+C   I+ N ANMC  CL   VDVTEGI K  ++ QC+ C +W     WV  ELES ELLA+CLK+I GLNK  LVDA ++WTEPHSKR+K++ TV++EV+NG  +QQ      S +V  +VR QQC +C   F N +W+A VQVRQ+VDHKRTF YLEQL+L+    +    ++   DGVDFFF ++ HA+ F +FL   VP ++K  KK++S D+HSN  N + + AVDL  +C++DLV LP      L   ++L  V +VTS +H++DP T+ RAE+  DK+WR P   L + K L E+ VLD  P+
Sbjct:    5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPL 318          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 305 bits (781), Expect = 1.290e-95
Identity = 155/319 (48.59%), Postives = 215/319 (67.40%), Query Frame = 1
Query:  202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 1152
            ++  TILCC+C   I  N AN C  CL + VDVTEGI K  ++ QC+ C RW     WV  ELES ELLA+CLK+I+ LN+  L+DA++IWTEPHS+R+K++ TV++EVL+ + MQQ      S +V  VVR QQC  C   F NQ+WRA VQVRQRVDHKRTF +LEQL+L+  A +   +++   DGVDFFFS++ HA+ F +FL  +VP +VK  KK++S D+HSN HN + + AV++ P+C++DLV+LP      L   + L  V  VTS +H+VDP T   AE+ ++K+WR P   L ++KA+ +  VLD  P+
Sbjct:    6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM 317          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A316UYV2_9BASI (60S ribosomal export protein NMD3 n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UYV2_9BASI)

HSP 1 Score: 306 bits (785), Expect = 1.430e-95
Identity = 154/324 (47.53%), Postives = 221/324 (68.21%), Query Frame = 1
Query:  202 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQ-WVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVV--RVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVDPAA 1164
            AE   +LC  CG +I PN AN+C  CL  +VD+TEGI K   +  CK C R+L+  Q WV  +LES ELLA+CL+++ GLNK  L+DA FIWTEPHSKR++V+ TV++EVL    +QQ         VE +V++ QCPDC R     TW+A+VQVRQ+V HKRTFLYLEQL+L+ NA K  +++  ++DG+DF+++Q+AHAV   EFL + VP +V  +  ++SMD HS+  NN+ + +V++ P+C++DL+ LP+    SL     LV+  R+T+ + L+DP TL  A++PA+K++R P   L T+  L EF+VLD+EP   AA
Sbjct:   11 AEQGLVLCADCGTAIPPNSANLCLSCLRNSVDITEGIPKQATVNFCKNCERYLNPPQTWVMAQLESRELLAICLRKLRGLNKVRLIDAGFIWTEPHSKRLRVKLTVQKEVLISTILQQIFE------VEYIVQYGQCPDCTRLAAKNTWKAQVQVRQKVPHKRTFLYLEQLILKHNAHKDTINISEKKDGLDFYYTQRAHAVKMCEFLASVVPVKVTSSTSVISMDIHSSTSNNKFTYSVEIAPICKDDLICLPKNVAKSLGQLPQLVLCSRITNSIRLMDPVTLHYADIPAEKYFRDPFQALCTIPELVEFLVLDIEPSTHAA 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPD6_9STRA3.790e-12056.7960S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
D7G1R1_ECTSI1.030e-10754.4360S ribosomal export protein NMD3 n=1 Tax=Ectocarp... [more]
A0A024UHG0_9STRA7.370e-9848.4560S ribosomal export protein NMD3 n=7 Tax=Aphanomy... [more]
A0A6G0XWA3_9STRA2.060e-9648.8960S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
W2I7I2_PHYPR2.180e-9648.5960S ribosomal export protein NMD3 n=9 Tax=Peronosp... [more]
A0A484E8L1_BRELC4.470e-9648.4360S ribosomal export protein NMD3 n=1 Tax=Bremia l... [more]
A0A316UBA1_9BASI5.370e-9647.5060S ribosomal export protein NMD3 n=1 Tax=Pseudomi... [more]
T0RPV6_SAPDV8.190e-9647.9860S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
D0MSQ0_PHYIT1.290e-9548.5960S ribosomal export protein NMD3 n=18 Tax=Peronos... [more]
A0A316UYV2_9BASI1.430e-9547.5360S ribosomal export protein NMD3 n=1 Tax=Jaminaea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7033contigP-wetherbeei_contig7033:15..2958 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G1R1
PFAMsNMD3
Model size1239
Max annot lvl2759|Eukaryota
KEGG koko:K07562
KEGG Pathwayko03008,ko03013,map03008,map03013
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.68e-108
EggNOG OGsCOG1499@1|root,KOG2613@2759|Eukaryota
Ec32 ortholog descriptionNMD3
Ec32 orthologEc-13_001070.1
Descriptionribosomal large subunit binding
Cds size1239
COG categoryJ
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7033.1.2prot_P-wetherbeei_contig7033.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7033 15..2958 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186953.5413847-CDS-P-wetherbeei_contig7033:14..3861683186953.5413847-CDS-P-wetherbeei_contig7033:14..386Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 15..386 +
1683186953.5514488-CDS-P-wetherbeei_contig7033:550..6561683186953.5514488-CDS-P-wetherbeei_contig7033:550..656Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 551..656 +
1683186953.5596237-CDS-P-wetherbeei_contig7033:973..10721683186953.5596237-CDS-P-wetherbeei_contig7033:973..1072Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 974..1072 +
1683186953.5675542-CDS-P-wetherbeei_contig7033:1360..14911683186953.5675542-CDS-P-wetherbeei_contig7033:1360..1491Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 1361..1491 +
1683186953.575405-CDS-P-wetherbeei_contig7033:1821..19621683186953.575405-CDS-P-wetherbeei_contig7033:1821..1962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 1822..1962 +
1683186953.5832345-CDS-P-wetherbeei_contig7033:2319..25431683186953.5832345-CDS-P-wetherbeei_contig7033:2319..2543Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 2320..2543 +
1683186953.5910757-CDS-P-wetherbeei_contig7033:2792..29581683186953.5910757-CDS-P-wetherbeei_contig7033:2792..2958Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7033 2793..2958 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7033.1.2

>prot_P-wetherbeei_contig7033.1.2 ID=prot_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp
MLFLGGKETGKNHKGEISNTTPHTQPATSPSGLQTSVSHRVLSVAERTRA
LLSIMATLVEQCSARPKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDV
TEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKND
LVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRW
QQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDM
DPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNN
QHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVVRVTSVLHLVDPTTLA
RAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVDPAAASAAAAAAASPA
AAGGGGGGGGRED
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mRNA from alignment at P-wetherbeei_contig7033:15..2958+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7033.1.2 ID=mRNA_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2944bp|location=Sequence derived from alignment at P-wetherbeei_contig7033:15..2958+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTTTCCTGGGGGGGAAGGAAACGGGAAAAAATCACAAGGGAGAAAT TTCAAATACCACGCCCCACACGCAGCCGGCTACCTCCCCTTCTGGCCTGC AAACTTCTGTTTCACATCGCGTGCTTTCCGTCGCCGAGAGGACAAGGGCT CTTCTCTCTATCATGGCCACACTGGTGGAGCAATGTTCAGCGCGCCCAAA GGCAGAGTACACAACGATCCTATGCTGTCTTTGCGGCAAGAGCATCCAGC CCAACGGCGCGAACATGTGTCGAGAATGCCTTCACACCAACGTGGACGTG ACCGAGGGCATATCGAAGACGGGCGTGCTGCTCCAGTGCAAAAAGTGCTT TCGGTGGCTTCACAACAATCAGGTAAGGGAACATTTGGATGCCAATTTAA GCCTCCCTCTCATAATTACCATTTTATGTGTCGAAGTCTGACCTTTCTTT GTCTATACCAGCCCAAAGATAATTTTCTGACGGCACGGAAATTTCTATTG CTTCTTCCATTCGCTCAATCCTGCCGGGGACCGCAGTGGGTGCGCTGCGA GCTCGAGTCACCGGAGCTGCTGGCCGTGTGCCTGAAGCGCATCCATGGCC TCAACAAGAACGACCTCGTCGATGCCTCTTTCATCTGGACAGGTATGTTG CGGAGCGTCCGAAATTGGCTGGTTTCAAGCATAAACAAGTGGGGCATATT TTCACTTTCTATTCTTCTGTTTCTGCCGATGCGTTCGAGTGCTATCTGTG CTGTTCGCGCCACCTTGTCCCATTCCTAGCATCGCGAGACCTGAACTAAG CGATTGAGGGTTTAAAGTTTTCTTTTCTTCCTCCTTTCTGTCTTCTGTCT TTGTGCTCGTGCTGCTCTTTCCAGATTGCTTTCTGGCCTTTCTCTGTCTT GCATCGGGCGACGCCATCTCAACTGCCGACTTCTGCGTTTCTGCCGCTCG CTTCTGCAGAGCCGCACAGCAAGCGAGTGAAGGTGCGGGCGACGGTGCGC CGTGAAGTGCTCAACGGAGTCAACATGCAGCAGCAGGCGAGAACGAATTT ATCTTGCAGTTCTGGTGGCGCGGAAATTGAGCTCGATCGATTTCCTTGGT TGCCTTTTCCTTCAACCTTCGAGGTCTGGCGATTGACCTGCAACCGCAGT TCTTGTCGTTGGAGAGCTTTTAGAAACATCATTGCGAGACGGTATGGCGG GTCGATGCTGCTCCATCGTCGCCGTCGCAGCTCTGGAGGCGCTGGTGCCC CCCCCCCCAATCCTCGCTCTTTTTCAGTTTCTCCTTTTTCCCTTTCCGTT TCTCACTCTACTTTCGCTTTCTGCTCTTCTCGTCGGGACCAGGTAGTGGT GGAACTCGTCGTGCGGTGGCAGCAGTGCCCGGATTGCGGGCGCGAGTTCG TGAACCAGACGTGGCGCGCCAAGGTTCAGGTGCGGCAGCGTGTCGACCAC AAGCGCACTTTCCTCTACCTCGAGCAGGTGAGTTTAGCGAGAGTGGTTAG AGCACTCCGAAATCCATCCGGGCCGCCCAGGTTCAGAGCGTTTTGGAGGT ATCAAGACACGAGAAAGGTGGAAACTCTGGGAGGGAGGAAGTTTTAAACA CGCCGCATGTTATTCCAGAGGCCTGAGACAGTCGGAGCTGTTCCAGGCTC TAGTCGCCACGGCTGTCTTTTGTTGGCAGTCTTTCTCTTCCCCCGCGTCT CTTTAATGCTCTTACTGCCGCCGCCGCCGCCGCCGTTGTTACCTCAACTG GCGTCAACCGAAAAACTCCAAACGAACCGAAAAAATGAAACCGCCGATCG GCACCAGCTGATGCTGCGGCGCAACGCAGCCAAGATGTGCGTGGACATGG ATCCACAGCGGGACGGCGTCGACTTCTTCTTCTCGCAGAAGGCCCACGCC GTTGCCTTCACCGAGTTCCTCCTCACCGCCGTGCCCTGCCGCGTCAAGGT GAGTCTGTCGGCATTTCCTTTCTTCGGTGTTTCGTGGGTGCTTCAGTTCG TAGGCGCGAAAAAACGAGAAGAAAAGAGAGGAGAGGGGACGACAATAGGG ACAGAGGGCTGTCCCTCGATTGAGGTGGGGCGGACGGTGGCCATGGATTT GGAGTTCTTGTAGATTGTGGGCGCTTCGTGCTTTCTCCTTGAGGTGCAGT GTTTTGTCTGCCGGTTGCTCAAAGTGCGGCCTTTACCTATTACGGTTCTC TGTGCGCTCTGGCCCTCTCTATGTTGCTCCCCACCGACTTTTAACGACCG GAACGTGCACCATCGCCTTTCTCTTTTCAACTCCTCTTTCGGTCCGCCGT TTCAGGTTACCAAAAAGATGGTGTCGATGGACAGCCACAGCAACGTTCAC AACAACCAGCACAGCATGGCGGTCGATCTCGTGCCGCTCTGTCGCGAGGA CCTCGTTGTTCTGCCGCGCGGCTCGGGGAACTCTCTGAGCGGGGCGGCGG CGCTGGTGGTGCGGGTGACATCGGTGCTGCACCTGGTGGACCCCACGACG CTCGCGCGCGCCGAGCTCCCTGCCGACAAGTGAATCTTCGTTTCTTTGTG TTTCAGTTCGATTTATTCCGGGTTTTTTGGAGAGACCTGTCGGCAGAAAA CATACAATCGGGCGCGTAGGTTGTTTCTGAAGCACATGCAGGCGCTGTTA ACGATTGCTCAGCATCTTCTAGATATCATCGTTTGGTGGTTGTGGTTCGA TTGACGGTTCTTCGCGTGCGTTGCAGATGGGCGCAACTGCTCAATCCTCG ATTCCTCCTTTCACCCATCACTGCCCAGGTTTTGGCGCGCTCCCGTGGCG CCGTTGCTGACTGTCAAGGCCCTCGCTGAGTTTGTCGTGCTCGATGTCGA GCCGGTGGACCCGGCGGCGGCGTCAGCGGCGGCGGCGGCGGCGGCCAGTC CAGCGGCGGCCGGCGGCGGCGGCGGCGGCGGCGGGCGGGAGGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7033:15..2958+

>mRNA_P-wetherbeei_contig7033.1.2 ID=mRNA_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1239bp|location=Sequence derived from alignment at P-wetherbeei_contig7033:15..2958+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTTTCCTGGGGGGGAAGGAAACGGGAAAAAATCACAAGGGAGAAAT
TTCAAATACCACGCCCCACACGCAGCCGGCTACCTCCCCTTCTGGCCTGC
AAACTTCTGTTTCACATCGCGTGCTTTCCGTCGCCGAGAGGACAAGGGCT
CTTCTCTCTATCATGGCCACACTGGTGGAGCAATGTTCAGCGCGCCCAAA
GGCAGAGTACACAACGATCCTATGCTGTCTTTGCGGCAAGAGCATCCAGC
CCAACGGCGCGAACATGTGTCGAGAATGCCTTCACACCAACGTGGACGTG
ACCGAGGGCATATCGAAGACGGGCGTGCTGCTCCAGTGCAAAAAGTGCTT
TCGGTGGCTTCACAACAATCAGTGGGTGCGCTGCGAGCTCGAGTCACCGG
AGCTGCTGGCCGTGTGCCTGAAGCGCATCCATGGCCTCAACAAGAACGAC
CTCGTCGATGCCTCTTTCATCTGGACAGAGCCGCACAGCAAGCGAGTGAA
GGTGCGGGCGACGGTGCGCCGTGAAGTGCTCAACGGAGTCAACATGCAGC
AGCAGGCGAGAACGAATTTATCTTGCATGGTGGAACTCGTCGTGCGGTGG
CAGCAGTGCCCGGATTGCGGGCGCGAGTTCGTGAACCAGACGTGGCGCGC
CAAGGTTCAGGTGCGGCAGCGTGTCGACCACAAGCGCACTTTCCTCTACC
TCGAGCAGCTGATGCTGCGGCGCAACGCAGCCAAGATGTGCGTGGACATG
GATCCACAGCGGGACGGCGTCGACTTCTTCTTCTCGCAGAAGGCCCACGC
CGTTGCCTTCACCGAGTTCCTCCTCACCGCCGTGCCCTGCCGCGTCAAGG
TTACCAAAAAGATGGTGTCGATGGACAGCCACAGCAACGTTCACAACAAC
CAGCACAGCATGGCGGTCGATCTCGTGCCGCTCTGTCGCGAGGACCTCGT
TGTTCTGCCGCGCGGCTCGGGGAACTCTCTGAGCGGGGCGGCGGCGCTGG
TGGTGCGGGTGACATCGGTGCTGCACCTGGTGGACCCCACGACGCTCGCG
CGCGCCGAGCTCCCTGCCGACAAGTTTTGGCGCGCTCCCGTGGCGCCGTT
GCTGACTGTCAAGGCCCTCGCTGAGTTTGTCGTGCTCGATGTCGAGCCGG
TGGACCCGGCGGCGGCGTCAGCGGCGGCGGCGGCGGCGGCCAGTCCAGCG
GCGGCCGGCGGCGGCGGCGGCGGCGGCGGGCGGGAGGAC
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