mRNA_P-wetherbeei_contig7031.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7031.1.1
Unique NamemRNA_P-wetherbeei_contig7031.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: A0A6H5LLH5_9PHAE (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLH5_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 3.170e-86
Identity = 155/288 (53.82%), Postives = 186/288 (64.58%), Query Frame = 1
Query:    1 PRVSLAATVP---------ATGAAE--TEVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDLRSVKTGEG 831
            P V  AA  P         A GAA    +VGDVRR L++ +ERL  N +L D+A+L GELEYLEGVS E  FW+D  +AR  L  L  ++ Q +R   WR W  DA+T +EL  +  G D                          E   AL  L+RDLDAWE+++LLSG +D  GCRL+I AGAGGTEAQDWAEML RMY RF QRRG + ++V++E GEVAGIKSC M+VEG  AYG LAGEKGTHRLVR SPFNAQAKRQTSFAGVE+FPI+E+DDL  +   EG
Sbjct:   56 PAVQRAAAAPRSTPVRPRTALGAANLAVDVGDVRRALSSARERLEKNRQLFDEARLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLYRWRGWEADAETVIELCGEEEGDD------------------EETAAMLDEATEALQLLQRDLDAWEMQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKIVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEG 325          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: D7FJS9_ECTSI (Peptide chain release factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS9_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 3.280e-86
Identity = 156/279 (55.91%), Postives = 188/279 (67.38%), Query Frame = 1
Query:    1 PRVSLAATVPATGAAE--TEVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDLRSVKTGEG 831
            PR++      A GAA+   +VGDVRR L++ +ERL  N +L D+AKL GELEYLEGVS E  FW+D  +AR  L  L  ++ Q +R   WR W  DA+T +EL  +  GGD                          E M AL  L+RDLDAWEL++LLSG +D  GCRL+I AGAGGTEAQDWAEML RMY RF QRRG + ++V++E GEVAGIKSC M+VEG  AYG LAGEKGTHRLVR SPFNAQAKRQTSFAGVE+FPI+E+DDL  +   EG
Sbjct:   67 PRLTPVRPRTALGAAKLAVDVGDVRRGLSSARERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETVIELCGEEEGGD------------------EETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEG 327          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: A0A835Z7S5_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.880e-74
Identity = 130/238 (54.62%), Postives = 157/238 (65.97%), Query Frame = 1
Query:  118 LDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDLRSVKTGEG 831
            +D  KL GEL YLEGV  E GFWDD AAAR  LA    +++Q +R   W +W  D ++A+EL+ D   GD                         +E  A L    +DLD WELE+LLSG  D AG +L+IQAGAGGTEAQDWA ML RMY R+ QR+G   +++++E GEVAGIKSC ++VEG L YGLLAGEKGTHRLVR SPFNAQAKRQTSFAGVETFP+LE +DL  V   +G
Sbjct:    1 MDSGKLTGELAYLEGVCSEAGFWDDAAAARKTLAESTRLKSQVDRLDRWAAWGGDVESALELLAD---GDALS--------------DAEAVALAEEAAATLDAWAKDLDTWELERLLSGKFDNAGTQLTIQAGAGGTEAQDWALMLQRMYTRYFQRKGFSYKLIEEEPGEVAGIKSCRIDVEGPLCYGLLAGEKGTHRLVRQSPFNAQAKRQTSFAGVETFPVLELEDLDDVHIPDG 221          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: A0A0G4ETN2_VITBC (RF_PROK_I domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETN2_VITBC)

HSP 1 Score: 230 bits (587), Expect = 2.710e-69
Identity = 127/271 (46.86%), Postives = 165/271 (60.89%), Query Frame = 1
Query:    7 VSL-AATVPATGAAETEVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDLRSV 816
            VSL AA      A+  EV +V+R L  L+ER   N EL D   +  E++ ++  + ++ FWDDPA A    ARL  ++        WR  +EDA+ A++ +      D                          E +  + RL R +D+WELEKL+ GP+D  GCRL + AGAGGTE+ DWA+ML RMY RF QR+G R RVVD+ DGE AGIKS  +E+EG  AYGLL+GEKGTHRLVR+SPFNAQ KRQTSFAGVET PIL ++D+R +
Sbjct:   64 VSLKAAAADQPPASAVEVNEVKRTLDTLRERYDRNVELADLPSIGREMDSIQRETTKEDFWDDPARASKLSARLQRLKESRSSVEGWRRSLEDAEAAIDFVTSEELSDAE------------------RNEFLAESVTTMKRLSRHMDSWELEKLMDGPYDRVGCRLYVTAGAGGTESCDWADMLLRMYLRFAQRKGWRARVVDRSDGEEAGIKSAEVEIEGEYAYGLLSGEKGTHRLVRISPFNAQGKRQTSFAGVETMPILPDEDVRDI 316          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: A0A7S2UWG0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG0_9STRA)

HSP 1 Score: 216 bits (549), Expect = 9.410e-64
Identity = 111/251 (44.22%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   55 VGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDL 807
            +  ++++L    ER+  N +L+    L GE++ LEG + E   WDDPA  +A  ++L  ++ + E++  W+ W  D +TA EL  D                              +E +     L++DLD++ELE++L GP+D   CRL+IQAGAGGT+AQDWA ML RMY+R+ +R+G ++ ++D+ +GE AGIKS  +E+ G  AYG LAGEKGTHRLVRLSPFN+  KRQTSFAGVET PI+E+DDL
Sbjct:   84 ISSLKKDLQGFHERIERNVDLVGILALKGEIKDLEGQASESSLWDDPARGQALTSKLGFLKGRLEQTERWQRWQGDIETACELGADP------------------DLDSEEAAMLVEEALDISRNLQKDLDSFELEQMLGGPYDNCPCRLTIQAGAGGTDAQDWAAMLLRMYRRYAERQGYQVTLIDEMEGEEAGIKSAELEITGPFAYGRLAGEKGTHRLVRLSPFNSSNKRQTSFAGVETIPIVEQDDL 316          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: UPI001FF3C1C2 (peptide chain release factor 2 n=1 Tax=Synechococcus sp. C9 TaxID=102119 RepID=UPI001FF3C1C2)

HSP 1 Score: 213 bits (541), Expect = 1.510e-63
Identity = 117/259 (45.17%), Postives = 154/259 (59.46%), Query Frame = 1
Query:   52 EVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDLRSVKTGE 828
            E+ D++R++  L  RL    + LD   L  +L  L+ V+G+  FWDDP  A+  L  L   +A  E+   WR  +ED Q  VEL+  A                             +E +  L  L ++L+ WELE+LLS P+DA G  L+I AGAGGT+AQDWAEML RMY R+ +R+G ++R+ D  +GE AGIKS T+E+EGR AYG L GEKGTHRLVR+SPFNA  KRQTSFAGVE  P+L E  +  V+  E
Sbjct:    2 ELSDLKRQVDQLNTRLGHAQDYLDPEALTAQLRDLQQVAGQPDFWDDPQRAQTTLQTLNDTKASLEQLHRWRRHIEDCQAIVELLATA-----------------------PDAALEQEAVQVLTTLDQELNRWELERLLSQPYDAQGAVLTINAGAGGTDAQDWAEMLLRMYTRWGERQGYKVRLTDLSEGEEAGIKSATLEIEGRYAYGYLRGEKGTHRLVRISPFNANGKRQTSFAGVEVMPMLAEQMVEEVEIPE 237          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: UPI0012EC411E (peptide chain release factor 2 n=1 Tax=Rubidibacter lacunae TaxID=582514 RepID=UPI0012EC411E)

HSP 1 Score: 211 bits (538), Expect = 3.920e-63
Identity = 117/259 (45.17%), Postives = 157/259 (60.62%), Query Frame = 1
Query:   52 EVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDLRSVKTGE 828
            E  +++RE+ AL ERL    + LD A L  E+  LE  + +  FWD+P AA+  + RL   +A  E  R WR+ +ED++  VEL+ D    D                          E    L RL R+LD W++E++LSGP+D  G  L+I AGAGGT+AQDWAEML RMY R+ +R+G R+ + +  +G+ AGIKS T+EV+GR AYG L GEKGTHRLVR+SPFNA  KRQTSFAG+E  P L+E  +  V+  E
Sbjct:    2 ETTELKREVRALAERLDKVQDYLDPAALNAEIHDLEQTAAQPEFWDEPDAAQRLIQRLDGRKASLEVYRQWRAGLEDSEAIVELL-DQDSDD----------------------LLLAEATETLTRLNRELDRWDVEQMLSGPYDERGAVLTINAGAGGTDAQDWAEMLLRMYTRWAERQGYRIHLAELSEGDEAGIKSATLEVDGRFAYGYLRGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALDEASVSDVEIPE 237          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: A0A5J6Q530_9SYNE (Peptide chain release factor 2 n=1 Tax=Synechococcus sp. RSCCF101 TaxID=2511069 RepID=A0A5J6Q530_9SYNE)

HSP 1 Score: 207 bits (527), Expect = 2.210e-61
Identity = 115/250 (46.00%), Postives = 151/250 (60.40%), Query Frame = 1
Query:   52 EVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEED 801
            ++ D +R+L+ L ERL    + LD   L    + LE ++ +  FW+D  AA+  + +L  V+AQ  +   WR+ VEDA+  +EL                                  EG   L RLR +LD WELE+LLSGPHD  G  L+I AGAGGT+AQDWA+ML RMY R+ + RG+++ V +  +GE AGIKS T+E+EGR AYG L  EKGTHRLVR+SPFNA  KRQTSFAGVE  P+LEE+
Sbjct:    3 DLTDFKRDLSELTERLGHAQDCLDVPALTARQQDLEQLASQPDFWNDQQAAQRQMRQLDDVKAQLSQLSQWRAVVEDARAGLELA-----------------------ELEPDDDLLAEGQQGLDRLRNELDRWELERLLSGPHDKEGAVLTINAGAGGTDAQDWAQMLLRMYSRWAEGRGMKVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGVEVMPMLEEE 229          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: UPI0016835605 (peptide chain release factor 2 n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016835605)

HSP 1 Score: 202 bits (513), Expect = 2.340e-59
Identity = 108/252 (42.86%), Postives = 153/252 (60.71%), Query Frame = 1
Query:   52 EVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEEDDL 807
            E+ D++R+L  +  RL    + LD   L  ++  LE  + +  FWDD  +A+  L RL  +++  E+ + W+S  ED+    EL+                                +E  + L RL RDLD WEL++LLSG +D+AG  L+I AGAGGT+AQDWAEML RMY R+ +++G ++ + +  +G+ AGIKS T+E++GR AYG L GEKGTHRLVR+SPFNA  KRQTSFAGVE  P LEE+++
Sbjct:    2 EITDLKRDLQTIATRLGKTQDYLDLPALNAQIHDLEQSAAQPNFWDDQTSAQKTLQRLNDLKSNLEQMQQWQSEWEDSSAIAELL-----------------------EQEDDQTLLEEAASTLQRLERDLDRWELQQLLSGQYDSAGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAELSEGDEAGIKSVTLEIDGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEIMPALEENEI 230          
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Match: A0A6I5NQD3_9CYAN (Peptide chain release factor 2 n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5NQD3_9CYAN)

HSP 1 Score: 201 bits (512), Expect = 3.760e-59
Identity = 102/250 (40.80%), Postives = 152/250 (60.80%), Query Frame = 1
Query:   52 EVGDVRRELAALKERLAANAELLDDAKLAGELEYLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVELICDAGGGDGTGGXXXXXXXXXXXXXXXXXXXXXKEGMAALCRLRRDLDAWELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLRLRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAKRQTSFAGVETFPILEED 801
            ++ D++RE+  L ERL    + LD   +  +++ LE ++ +  FWDDP+ A+  L  L   ++  E+   W++ +ED Q  +EL+                                 E    + +L R+L  WEL++LLSGP+D +G  +SI AGAGGT+AQDWAEML RMY R+C++ G RL ++++  G+ AG+KS T+E+EGR A+G L  EKGTHRLVR+SPFNA  KRQTSFAG+E  P+L+++
Sbjct:    3 DLSDLKREIELLSERLGKTQDYLDLPAIRAKIQDLEQIAAQPDFWDDPSQAQTKLQELNEYKSHVEQLSEWQTNLEDMQAILELL-----------------------EAEADEALWHEAQTTVAKLNRELAQWELQQLLSGPYDKSGAIVSINAGAGGTDAQDWAEMLLRMYTRWCEQHGYRLHLLEESKGDEAGLKSATLEIEGRYAFGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPMLDDN 229          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7031.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LLH5_9PHAE3.170e-8653.82RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
D7FJS9_ECTSI3.280e-8655.91Peptide chain release factor n=1 Tax=Ectocarpus si... [more]
A0A835Z7S5_9STRA2.880e-7454.62RF_PROK_I domain-containing protein n=1 Tax=Tribon... [more]
A0A0G4ETN2_VITBC2.710e-6946.86RF_PROK_I domain-containing protein n=1 Tax=Vitrel... [more]
A0A7S2UWG0_9STRA9.410e-6444.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI001FF3C1C21.510e-6345.17peptide chain release factor 2 n=1 Tax=Synechococc... [more]
UPI0012EC411E3.920e-6345.17peptide chain release factor 2 n=1 Tax=Rubidibacte... [more]
A0A5J6Q530_9SYNE2.210e-6146.00Peptide chain release factor 2 n=1 Tax=Synechococc... [more]
UPI00168356052.340e-5942.86peptide chain release factor 2 n=1 Tax=Oscillatori... [more]
A0A6I5NQD3_9CYAN3.760e-5940.80Peptide chain release factor 2 n=1 Tax=Leptolyngby... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7031contigP-wetherbeei_contig7031:3..833 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FJS9
PFAMsPCRF,RF-1
Model size831
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00090,RC00162
KEGG koko:K01930,ko:K02836
KEGG ReactionR00942,R02237,R04241
KEGG Pathwayko00790,ko01100,ko01523,map00790,map01100,map01523
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003730,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006412,GO:0006415,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009657,GO:0009658,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0016043,GO:0016070,GO:0016149,GO:0019219,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031329,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043487,GO:0043488,GO:0043565,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311
Exons1
Evalue5.38e-87
EggNOG OGsCOG0216@1|root,KOG2726@2759|Eukaryota
EC6.3.2.17
Descriptiontranslation release factor activity
Cds size831
COG categoryJ
BRITEko00000,ko00001,ko01000,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186953.480718-CDS-P-wetherbeei_contig7031:2..8331683186953.480718-CDS-P-wetherbeei_contig7031:2..833Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7031 3..833 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7031.1.1prot_P-wetherbeei_contig7031.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7031 3..833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7031.1.1

>prot_P-wetherbeei_contig7031.1.1 ID=prot_P-wetherbeei_contig7031.1.1|Name=mRNA_P-wetherbeei_contig7031.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp
PRVSLAATVPATGAAETEVGDVRRELAALKERLAANAELLDDAKLAGELE
YLEGVSGEDGFWDDPAAARAALARLAAVRAQAERSRTWRSWVEDAQTAVE
LICDAGGGDGTGGGGGLGTGGGGGLGASEAAALAKEGMAALCRLRRDLDA
WELEKLLSGPHDAAGCRLSIQAGAGGTEAQDWAEMLCRMYQRFCQRRGLR
LRVVDKEDGEVAGIKSCTMEVEGRLAYGLLAGEKGTHRLVRLSPFNAQAK
RQTSFAGVETFPILEEDDLRSVKTGEG
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mRNA from alignment at P-wetherbeei_contig7031:3..833-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7031.1.1 ID=mRNA_P-wetherbeei_contig7031.1.1|Name=mRNA_P-wetherbeei_contig7031.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig7031:3..833- (Phaeothamnion wetherbeei SAG_119_79)
CCCAGGGTTTCTTTGGCGGCGACGGTGCCCGCCACGGGCGCCGCAGAGAC GGAGGTCGGGGACGTGCGGCGCGAGTTGGCGGCGCTGAAGGAGCGGCTGG CCGCCAACGCCGAGCTGCTCGACGACGCCAAGCTGGCGGGCGAGCTCGAG TACCTCGAGGGCGTCAGCGGCGAAGACGGCTTCTGGGACGACCCCGCCGC CGCGCGGGCCGCCCTCGCGCGGCTGGCGGCTGTGCGCGCGCAGGCGGAGC GCTCACGGACGTGGCGGTCGTGGGTGGAGGACGCGCAGACGGCGGTGGAG CTCATCTGCGATGCCGGCGGCGGCGACGGCACCGGCGGTGGCGGCGGCCT CGGCACCGGCGGTGGCGGCGGCCTCGGCGCCAGCGAGGCCGCCGCGCTCG CCAAGGAGGGCATGGCGGCGCTGTGCCGGCTGCGAAGGGATTTGGACGCG TGGGAACTCGAGAAGCTGCTGTCCGGCCCGCACGATGCCGCCGGCTGCCG CCTCAGCATCCAGGCCGGTGCCGGCGGCACCGAGGCGCAGGACTGGGCCG AGATGCTGTGCCGCATGTATCAGCGCTTCTGCCAGCGGCGTGGGCTGCGG CTGCGCGTCGTGGACAAGGAAGACGGCGAGGTCGCCGGCATCAAGAGCTG CACGATGGAAGTGGAGGGCCGGCTGGCATATGGTTTGCTGGCAGGCGAAA AGGGTACGCACCGGCTGGTGCGGCTGTCGCCGTTCAACGCGCAGGCGAAG CGGCAGACTAGCTTCGCGGGCGTGGAGACTTTTCCGATCCTCGAGGAGGA CGACCTCAGGTCAGTCAAGACAGGGGAAGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7031:3..833-

>mRNA_P-wetherbeei_contig7031.1.1 ID=mRNA_P-wetherbeei_contig7031.1.1|Name=mRNA_P-wetherbeei_contig7031.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig7031:3..833- (Phaeothamnion wetherbeei SAG_119_79)
CCCAGGGTTTCTTTGGCGGCGACGGTGCCCGCCACGGGCGCCGCAGAGAC
GGAGGTCGGGGACGTGCGGCGCGAGTTGGCGGCGCTGAAGGAGCGGCTGG
CCGCCAACGCCGAGCTGCTCGACGACGCCAAGCTGGCGGGCGAGCTCGAG
TACCTCGAGGGCGTCAGCGGCGAAGACGGCTTCTGGGACGACCCCGCCGC
CGCGCGGGCCGCCCTCGCGCGGCTGGCGGCTGTGCGCGCGCAGGCGGAGC
GCTCACGGACGTGGCGGTCGTGGGTGGAGGACGCGCAGACGGCGGTGGAG
CTCATCTGCGATGCCGGCGGCGGCGACGGCACCGGCGGTGGCGGCGGCCT
CGGCACCGGCGGTGGCGGCGGCCTCGGCGCCAGCGAGGCCGCCGCGCTCG
CCAAGGAGGGCATGGCGGCGCTGTGCCGGCTGCGAAGGGATTTGGACGCG
TGGGAACTCGAGAAGCTGCTGTCCGGCCCGCACGATGCCGCCGGCTGCCG
CCTCAGCATCCAGGCCGGTGCCGGCGGCACCGAGGCGCAGGACTGGGCCG
AGATGCTGTGCCGCATGTATCAGCGCTTCTGCCAGCGGCGTGGGCTGCGG
CTGCGCGTCGTGGACAAGGAAGACGGCGAGGTCGCCGGCATCAAGAGCTG
CACGATGGAAGTGGAGGGCCGGCTGGCATATGGTTTGCTGGCAGGCGAAA
AGGGTACGCACCGGCTGGTGCGGCTGTCGCCGTTCAACGCGCAGGCGAAG
CGGCAGACTAGCTTCGCGGGCGTGGAGACTTTTCCGATCCTCGAGGAGGA
CGACCTCAGGTCAGTCAAGACAGGGGAAGGA
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