mRNA_P-wetherbeei_contig7020.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7020.1.1
Unique NamemRNA_P-wetherbeei_contig7020.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A836CG09_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG09_9STRA)

HSP 1 Score: 292 bits (747), Expect = 4.110e-93
Identity = 136/189 (71.96%), Postives = 158/189 (83.60%), Query Frame = 1 
Query:    1 RRLPGEDGDVEGRDVFNERPTAEEMMVTEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEI 567
            RR P  D   EGRDVFNE+PTA+++ +   AAAALGR A LRTT+GD+ +KLF +ECPRTVENFC HA +GYYDNV+FHRV+KGFMVQTGDP GDGTGGESIWGG+FEDEFHRDLRHDRPFT+SMAN+G  TNGSQFFIT +PTPWLD+KHTVFGRVT GME V  IEN   D  D+P  +IKIL++E+
Sbjct:  412 RREPAPDEGAEGRDVFNEKPTADDVGMEMEAAAALGREAILRTTLGDVRVKLFGEECPRTVENFCGHARSGYYDNVVFHRVIKGFMVQTGDPLGDGTGGESIWGGEFEDEFHRDLRHDRPFTVSMANAGPTTNGSQFFITTVPTPWLDNKHTVFGRVTAGMEVVQAIENAKVDKLDRPHTEIKILSVEV 600
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: D7FXC2_ECTSI (Peptidylprolyl isomerase domain and WD repeat containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC2_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 4.490e-92
Identity = 137/191 (71.73%), Postives = 157/191 (82.20%), Query Frame = 1 
Query:    1 RRLPGEDGDVE-GRDVFNERPTAEEMMVTEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEIS 570
            +R P ED D E GRDVFNE+P+AEEM V       +GR A +RT+MGDI  KLFPDECP+T+ENFCTH+ NGYYD VIFHRV+KGFMVQTGDP GDGTGGESIWGG+FEDEFHR+LRHDRPFTLSMAN G  TNGSQFFIT +PTPWLD+KHTVFGRVT GM+ V  IE    D TDKPF ++KI++I+IS
Sbjct:  383 KRDPVEDDDGENGRDVFNEKPSAEEMHVVAETNTVVGREAVIRTSMGDIRTKLFPDECPKTIENFCTHSRNGYYDGVIFHRVIKGFMVQTGDPLGDGTGGESIWGGEFEDEFHRNLRHDRPFTLSMANGGPATNGSQFFITTVPTPWLDNKHTVFGRVTAGMDVVQTIEASKVDKTDKPFSEMKIISIDIS 573
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A7S2ALV2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALV2_9STRA)

HSP 1 Score: 276 bits (706), Expect = 5.650e-92
Identity = 125/190 (65.79%), Postives = 155/190 (81.58%), Query Frame = 1 
Query:    4 RLPGEDGDVEGRDVFNERPTAEEMMVTEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEIST 573
            + P  + D EGRDVFNERPTAEEM++    +  LG+ A +RTTMGDIH+KLF  EC +TVENF  H+ NGYYD ++FHRV+KGFM+QTGDP GDGTGGESIWG +FEDEFHR+LRHDRPFT+SMAN+G  TNGSQFFIT +P PWLD+KH+VFGRV KGM+ V  IE+   D  D+PF++IKI+N++I+T
Sbjct:   23 KRPPSETDAEGRDVFNERPTAEEMVMESEQSTILGKEAIIRTTMGDIHIKLFGIECAKTVENFAVHSRNGYYDGLLFHRVIKGFMIQTGDPLGDGTGGESIWGSEFEDEFHRNLRHDRPFTVSMANAGPGTNGSQFFITTVPCPWLDNKHSVFGRVHKGMDVVQAIESAKCDKLDRPFEEIKIINVDIAT 212
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A7G5F3K4_CLITE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clitoria ternatea TaxID=43366 RepID=A0A7G5F3K4_CLITE)

HSP 1 Score: 270 bits (691), Expect = 2.050e-89
Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = 1 
Query:    1 RRLPGEDGDV-EGRDVFNERPTAEEMM----VTEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEI 567
            RR P E  D  +GRDVFNE+P A+E++    + +    +L  +  L TTMGDIH+KL+P+ECP+TVENF TH  NGYYDN+IFHRV+KGFM+QTGDP GDGTGG+SIWG +FEDEFH+ LRHDRPFT+SMAN+G +TNGSQFFIT + TPWLD+KHTVFGRV KGM+ V  IE V TD TDKP+ D+KILN+ +
Sbjct:   35 RREPEEPEDATKGRDVFNEKPPADELLAVSDIGKAVTTSLPDNVILHTTMGDIHMKLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVAKGMDVVQAIEKVKTDKTDKPYQDVKILNVTV 228
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A4D9CR11_9STRA (PPIase cyclophilin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR11_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.430e-88
Identity = 138/199 (69.35%), Postives = 159/199 (79.90%), Query Frame = 1 
Query:    1 RRLP--------GEDGDVEGRDVFNERPTAEEMMV---TEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIE 564
            RR+P        GEDG   GRDV NE+PTAEE  V   T+ A   LG+ A LRTTMGDIHLKLF +ECPRT+ENF THA NGYYDNV+FHRV+KGFMVQTGDP+GDGTGGESIWGG+FEDE HR+LRHDRPFTLSMAN+G +TNGSQFFIT +PTPWLD KHTVFGRV +GM+ V +I  V  D  D+PF DIKI+N++
Sbjct:  468 RRMPSDVEGEGLGEDG---GRDVLNEKPTAEEATVASATDKAQQELGKAAILRTTMGDIHLKLFKEECPRTIENFVTHARNGYYDNVLFHRVIKGFMVQTGDPQGDGTGGESIWGGEFEDEIHRNLRHDRPFTLSMANAGPNTNGSQFFITTVPTPWLDGKHTVFGRVVQGMDVVSQISQVKVDPQDRPFADIKIINVD 663
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A1U8NYR0_GOSHI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8NYR0_GOSHI)

HSP 1 Score: 267 bits (682), Expect = 3.930e-88
Identity = 124/194 (63.92%), Postives = 154/194 (79.38%), Query Frame = 1 
Query:    1 RRLPGEDGDV-EGRDVFNERPTAEEMM----VTEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEI 567
            RR P E  D  +GRDVFNE+P A+E++    + +    +L  +  L TTMGDIH++L+P+ECP+TVENF TH  NGYYDN+IFHRV+KGFM+QTGDP GDGTGG+SIWG +FEDEFH+ LRHDRPFT+SMAN+G +TNGSQFFIT + TPWLD+KHTVFGRV KGM+ V  IE V TD  DKP+ D+KILN+ +
Sbjct:   29 RREPEEPEDATKGRDVFNEKPPADELLAVSDIGKAVTTSLPDNVILHTTMGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKADKPYQDVKILNVTV 222
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A6G0XCT6_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCT6_9STRA)

HSP 1 Score: 279 bits (713), Expect = 5.870e-88
Identity = 132/190 (69.47%), Postives = 157/190 (82.63%), Query Frame = 1 
Query:    4 RLPGEDGDVE-GRDVFNERPTAEEMMV-TEPAAAALGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEI 567
            R P +DGD E GRDVFNE+PT +E  V T  +AA LG  A + TT+GDI ++L+P+ECPRTVENFCTHA NGYYDN+IFHRV+K FM+QTGDP GDGTGGESIWGG+FEDEFHR+LRHDRPFT+SMAN+G  TNGSQFFIT +PTPWLD+KHTVFGRV  G +TV  IE V  D  DKP +++KI+NI+I
Sbjct:  418 REPVDDGDDEHGRDVFNEKPTLDESQVATNTSAATLGTRAVIHTTLGDIFIQLYPNECPRTVENFCTHARNGYYDNLIFHRVIKNFMIQTGDPLGDGTGGESIWGGEFEDEFHRNLRHDRPFTVSMANAGPRTNGSQFFITTVPTPWLDNKHTVFGRVENGKDTVATIEGVEVDRFDKPIEEVKIINIDI 607
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: W2Q5U2_PHYPN (PPIase cyclophilin-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q5U2_PHYPN)

HSP 1 Score: 278 bits (712), Expect = 1.400e-87
Identity = 134/187 (71.66%), Postives = 153/187 (81.82%), Query Frame = 1 
Query:   13 GEDGDVEGRDVFNERPTAEEMMVTEPAAAA--LGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEI 567
            GEDG   GRDVFNE+PT EE  V   ++ A  LG  A + TTMGDI LKLF  ECP+TVENFCTHA NGYYDN+IFHRV+K FMVQTGDP GDGTGG+SIWGG+FEDEFHR LRHDRPFTLSMAN+G  TNGSQFFIT +PTPWLD+KHTVFGRV +G +TV  IE+V  D +DKP +DIKI+NI+I
Sbjct:  443 GEDGTATGRDVFNEKPTLEEAQVATESSNAKVLGDTAVIHTTMGDITLKLFGKECPKTVENFCTHARNGYYDNLIFHRVIKNFMVQTGDPLGDGTGGKSIWGGEFEDEFHRSLRHDRPFTLSMANAGPGTNGSQFFITTVPTPWLDNKHTVFGRVEQGKDTVSSIESVRVDKSDKPLNDIKIINIDI 629
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BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: A0A139XKK6_TOXGO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Toxoplasma gondii ARI TaxID=1074872 RepID=A0A139XKK6_TOXGO)

HSP 1 Score: 266 bits (680), Expect = 4.140e-87
Identity = 125/192 (65.10%), Postives = 154/192 (80.21%), Query Frame = 1 
Query:   19 DGDVEGRDVFNERPTAEEMMVTEPAAAAL-------GRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEIST 573
            +G V+ RDVFNE+P+ EE     P+A++        GR AT+ TTMGDI ++LFP ECP+TVENFCTHA NGYYD  IFHRV+KGFM+QTGDP GDGTGGESIWGGDFEDEFHR L+HDRPFT+SMAN+G +TNGSQFFIT +P  WLD+KHTVFGRV +GM+ V +IENV T+  DKP  D+K+L I++++
Sbjct:   84 EGLVDLRDVFNEKPSKEEQEALAPSASSAIAPSLRSGRTATIFTTMGDIFIRLFPQECPKTVENFCTHARNGYYDQCIFHRVIKGFMIQTGDPNGDGTGGESIWGGDFEDEFHRALKHDRPFTVSMANAGPNTNGSQFFITTVPCSWLDNKHTVFGRVVQGMDVVTKIENVATNVEDKPKQDVKLLTIKVTS 275
[Close]
BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Match: H3G5V5_PHYRM (PPIase cyclophilin-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5V5_PHYRM)

HSP 1 Score: 276 bits (705), Expect = 9.390e-87
Identity = 136/195 (69.74%), Postives = 153/195 (78.46%), Query Frame = 1 
Query:    4 RLPGEDGDVEG-----RDVFNERPTAEEMMVTEPAAAA--LGRHATLRTTMGDIHLKLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGESIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSKHTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEI 567
            R P ED   EG     RDVFNE+PT EE  V   ++ A  LG  A + TTMGDI LKLF  ECP+TVENFCTHA NGYYDN+IFHRV+K FMVQTGDP GDGTGGESIWGG+FEDEFHR+LRHDRPFTLSMAN+G  TNGSQFF+T +PTPWLD+KHTVFGRV  G +TV  IEN   D +DKPF DIKI+NI+I
Sbjct:  415 REPEEDESEEGIASTGRDVFNEKPTLEEAQVATESSTAKILGETAVMHTTMGDITLKLFGKECPKTVENFCTHARNGYYDNLIFHRVIKNFMVQTGDPLGDGTGGESIWGGEFEDEFHRNLRHDRPFTLSMANAGPGTNGSQFFLTTVPTPWLDNKHTVFGRVEHGKDTVSSIENTRVDKSDKPFKDIKIINIDI 609
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7020.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG09_9STRA4.110e-9371.96PPIase cyclophilin-type domain-containing protein ... [more]
D7FXC2_ECTSI4.490e-9271.73Peptidylprolyl isomerase domain and WD repeat cont... [more]
A0A7S2ALV2_9STRA5.650e-9265.79Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyo... [more]
A0A7G5F3K4_CLITE2.050e-8964.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clitor... [more]
A0A4D9CR11_9STRA1.430e-8869.35PPIase cyclophilin-type domain-containing protein ... [more]
A0A1U8NYR0_GOSHI3.930e-8863.92Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gossyp... [more]
A0A6G0XCT6_9STRA5.870e-8869.47PPIase cyclophilin-type domain-containing protein ... [more]
W2Q5U2_PHYPN1.400e-8771.66PPIase cyclophilin-type domain-containing protein ... [more]
A0A139XKK6_TOXGO4.140e-8765.10Peptidyl-prolyl cis-trans isomerase n=1 Tax=Toxopl... [more]
H3G5V5_PHYRM9.390e-8769.74PPIase cyclophilin-type domain-containing protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7020contigP-wetherbeei_contig7020:961..3081 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FXC2
Preferred namePPWD1
PFAMsPro_isomerase,WD40
Model size579
Max annot lvl2759|Eukaryota
KEGG koko:K12736,ko:K14569
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0000785,GO:0000790,GO:0003002,GO:0003006,GO:0003674,GO:0003682,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005694,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0007389,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009653,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009908,GO:0009909,GO:0009933,GO:0009965,GO:0009987,GO:0010015,GO:0010016,GO:0010051,GO:0010073,GO:0010075,GO:0010082,GO:0010305,GO:0010338,GO:0010358,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016018,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019219,GO:0019222,GO:0019538,GO:0022414,GO:0022622,GO:0031056,GO:0031060,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033218,GO:0034641,GO:0036211,GO:0040008,GO:0040029,GO:0042277,GO:0042393,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048364,GO:0048366,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048442,GO:0048443,GO:0048444,GO:0048447,GO:0048449,GO:0048453,GO:0048464,GO:0048466,GO:0048467,GO:0048507,GO:0048509,GO:0048519,GO:0048523,GO:0048532,GO:0048580,GO:0048608,GO:0048638,GO:0048646,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051239,GO:0051246,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0071013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090567,GO:0090696,GO:0090697,GO:0090698,GO:0099402,GO:0140096,GO:1901360,GO:1901564,GO:1902275,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905392,GO:1905393,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000280,GO:2001141
Exons5
Evalue7.36e-93
EggNOG OGsKOG0882@1|root,KOG0882@2759|Eukaryota
EC5.2.1.8
Descriptionpeptidyl-prolyl cis-trans isomerase activity
Cds size579
COG categoryO
BRITEko00000,ko00001,ko01000,ko03009,ko03041,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186952.8628728-CDS-P-wetherbeei_contig7020:960..11021683186952.8628728-CDS-P-wetherbeei_contig7020:960..1102Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7020 961..1102 -
1683186952.8729584-CDS-P-wetherbeei_contig7020:1426..14781683186952.8729584-CDS-P-wetherbeei_contig7020:1426..1478Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7020 1427..1478 -
1683186952.8811371-CDS-P-wetherbeei_contig7020:2018..21541683186952.8811371-CDS-P-wetherbeei_contig7020:2018..2154Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7020 2019..2154 -
1683186952.8890076-CDS-P-wetherbeei_contig7020:2523..26191683186952.8890076-CDS-P-wetherbeei_contig7020:2523..2619Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7020 2524..2619 -
1683186952.8971095-CDS-P-wetherbeei_contig7020:2928..30811683186952.8971095-CDS-P-wetherbeei_contig7020:2928..3081Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7020 2929..3081 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7020.1.1prot_P-wetherbeei_contig7020.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7020 961..3081 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7020.1.1

>prot_P-wetherbeei_contig7020.1.1 ID=prot_P-wetherbeei_contig7020.1.1|Name=mRNA_P-wetherbeei_contig7020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp
RRLPGEDGDVEGRDVFNERPTAEEMMVTEPAAAALGRHATLRTTMGDIHL
KLFPDECPRTVENFCTHACNGYYDNVIFHRVMKGFMVQTGDPKGDGTGGE
SIWGGDFEDEFHRDLRHDRPFTLSMANSGADTNGSQFFITVIPTPWLDSK
HTVFGRVTKGMETVHRIENVPTDSTDKPFDDIKILNIEISTD*
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mRNA from alignment at P-wetherbeei_contig7020:961..3081-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7020.1.1 ID=mRNA_P-wetherbeei_contig7020.1.1|Name=mRNA_P-wetherbeei_contig7020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2121bp|location=Sequence derived from alignment at P-wetherbeei_contig7020:961..3081- (Phaeothamnion wetherbeei SAG_119_79)
AGGCGGCTGCCGGGAGAGGACGGGGACGTGGAGGGGCGCGACGTGTTCAA
CGAGCGGCCGACGGCAGAGGAGATGATGGTGACGGAGCCCGCCGCCGCCG
CCCTTGGCCGCCATGCCACGCTGCGCACTACCATGGGCGACATTCACCTC
AAGGTAAATGGGCAGTGCGGTCTGTTGTGTCTCGCTCCTGTCACTGTTTT
GTTAGGGGGCTGACTTTTTCAGTTTGTGCTTTCACCGAAGGATGGCACGG
CTTGAACAGGAAGGTTTATTTGATTTGTATACACAGATGCATATATTGTA
CGCCGGGCACCCGTCCGCATACACCCATCCGTCACTGCTCCTCACCGCCA
TTACGGCCGCATTCCGTCCACCGCCGCTGACTGCCCCGTCGGTTCACCGC
CACCCTTTCTGGCATTTTTCATTTTCTTTCTTGGACACTTCGTTCCTTCT
TTTCTTTTCCAGCTGTTCCCTGACGAGTGCCCGCGCACGGTGGAGAACTT
CTGCACGCACGCGTGCAACGGCTACTACGACAACGTCATATTCCACCGCG
TCATGAAGGTGCGCCGTTTTGTCTGTGCGCAGATTGATAGGGTTATTGAA
AAGGATGAAGGAACCGTTGATAGATTGAAAGGGGCGTTGGCACAATGTAG
TCGGGAAAGGGCCCGGATTGGTTCCGTTGCCGTTGAGTGCCGCCGGTCTC
ATCCTTTTTGCCGCTGGTGAACCCACCGTTTCGGGACGGTTTGCCGTCGC
ATGCCACGTCTCTCAGCATTTCTCCGGCATCAGATTTCTTTATCAGCGCT
TTTAAGGGCATCGCTCATCGGGTTGCTCCTCCGTCACGCTGTTCTGCCCG
TCCTCCTGCTGCTTGCTCTTCTCATGCATCTCTTACTGCCTGTTTGGTCC
CCTGCGCGGGTTTTCGCTGACTGACAGGGATTCATGGTGCAGACGGGGGA
CCCGAAGGGCGACGGGACAGGTGGCGAGAGCATCTGGGGCGGCGACTTCG
AGGACGAGTTCCACCGCGACCTCCGCCACGACCGACCCTTCACCCTCTCC
ATGGCCAACTCGGGTGAGTTCGGTGGAGACATACATCGGCCTTTCTTTCT
TATTGGGGGCTTTCTTTCTTTCTTTCTTTTTTCGGGTCTCTTTTTTCCAC
CCGTTTTTCCCCCAGCCTTTTTTGCCCCTTTTCGTCGCACATCGTTTCGT
TTACGGGTGGGGTTTGATCAGAGATCAATGGCCACAGGAATGCTGCTGGA
GCTTTTCCAGTGCGAGGCTTTTTCCGTTCTTTTCCTCGTATTATTTTATG
GATTAACTGTTGAGCTGAGCAACCCAACCCGTTCCTGCCTTCCTGAGCAT
CCATTTTCCTCCAAGCTGTCCATCCTACCATTTTCGTACTTCGCATCCAC
TTACTACTATCATTTTTTACGGCCGACTGAGCGACTCAAGAGTGGTTCGT
TGGGGTAAAGAATTGATTGAGTTTTAATGGTGTTCGACTTTCGTCTCTCA
GCGTTCGGTGCAGTTGATCGCTGCCCCCCACCGAATCCGCCGGACATTCG
ATCTTCCGATTGTACCTTATTTATTCTTGTATCTTCGTTCCGCTCTCCTG
CAGGTGCGGATACGAACGGGTCGCAGTTCTTCATCACGGTCATCCCGACG
CCATGGTGAGTACTAGAGCGACGCTCTCCTTTGGAACCGTTCTGGCGCGA
ACCTTTTGCCGCGCCGTAGACTGAGGGCGCCGTGCCACGACAAAAAGTCT
GAAGGGGACGTCCTCATTCTCTCCTCCGGGGATTGCAAGGACGACTCGCA
CTGCCGAGCAGTGCACCCGACGCGTTAGTATCAATCCTCTCGCAGTTGCT
CACTCTTCATTCTGTGCCCACTTCCCCGGTCCCCTGTCGGCGCCGCTGCC
ACTGCTGCATCCCCCCATCTGCCTCTCGCCTCACAACCAACGACCGGAAC
GGGTTGTCGGAAACGTAACGGATGTTCAGGCTGGACAGCAAGCACACGGT
GTTCGGTCGGGTGACCAAGGGCATGGAAACGGTGCACCGCATCGAGAACG
TGCCGACGGACAGCACAGACAAACCGTTCGACGACATCAAAATCCTGAAC
ATCGAAATCTCCACCGACTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7020:961..3081-

>mRNA_P-wetherbeei_contig7020.1.1 ID=mRNA_P-wetherbeei_contig7020.1.1|Name=mRNA_P-wetherbeei_contig7020.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig7020:961..3081- (Phaeothamnion wetherbeei SAG_119_79)
AGGCGGCTGCCGGGAGAGGACGGGGACGTGGAGGGGCGCGACGTGTTCAA
CGAGCGGCCGACGGCAGAGGAGATGATGGTGACGGAGCCCGCCGCCGCCG
CCCTTGGCCGCCATGCCACGCTGCGCACTACCATGGGCGACATTCACCTC
AAGCTGTTCCCTGACGAGTGCCCGCGCACGGTGGAGAACTTCTGCACGCA
CGCGTGCAACGGCTACTACGACAACGTCATATTCCACCGCGTCATGAAGG
GATTCATGGTGCAGACGGGGGACCCGAAGGGCGACGGGACAGGTGGCGAG
AGCATCTGGGGCGGCGACTTCGAGGACGAGTTCCACCGCGACCTCCGCCA
CGACCGACCCTTCACCCTCTCCATGGCCAACTCGGGTGCGGATACGAACG
GGTCGCAGTTCTTCATCACGGTCATCCCGACGCCATGGCTGGACAGCAAG
CACACGGTGTTCGGTCGGGTGACCAAGGGCATGGAAACGGTGCACCGCAT
CGAGAACGTGCCGACGGACAGCACAGACAAACCGTTCGACGACATCAAAA
TCCTGAACATCGAAATCTCCACCGACTAA
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