prot_P-wetherbeei_contig7018.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7018.1.1
Unique Nameprot_P-wetherbeei_contig7018.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length263
Homology
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 2.280e-112
Identity = 167/260 (64.23%), Postives = 209/260 (80.38%), Query Frame = 0
Query:    1 QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRV 260
            QDDP K + LLEVYG+ IQLC+ T N+ LMK+VYPK + LNA+VEDPRIMGVIREQGGKMYM M NW  AYNEFYEGFRNYQEAGN  AK CLKYVVLANML LS INPFAAREAKV+ EEKEI+AM +LR+AYEGNDL +FERTL ++ N+I +DPFVM Y+ PLR+R+ E VL+ L +PY+KIT+ F+A EL L   EVE LLI +ILD R+ G+IDQ+EG+LLL     + +++++DA+ RW+++L  L++ +A RV
Sbjct:   97 QDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 356          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 6.150e-111
Identity = 166/260 (63.85%), Postives = 211/260 (81.15%), Query Frame = 0
Query:    1 QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRV 260
            QDDP K + LLEVYG+ IQLC+ T N+ LMK+VYPK + LNA+VEDPRIMGVIREQGGKMYM M NW  AYNEFYEGFRNYQEAGN  AK CLKYVVLANML LS INPFAAREAKV+ EEKEI+AM +LR+AYEGNDL +FERTL ++ N+I +DPFVM Y+ PLR+R+ E VL+ L +PY+KIT+ F+A EL L   EVE LLI++ILD R+ G+I+Q+EG+LLL   + + +++++DA+ RW+++L  L++ +A RV
Sbjct:  189 QDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 448          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 335 bits (860), Expect = 8.450e-111
Identity = 162/261 (62.07%), Postives = 210/261 (80.46%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVSV 262
            DDP K + LLEVY L IQLC+ T+N+A M++VYPK + LNAAV DPRIMGVIRE+GGKM+M    W  AYNEFYEGFR++QEAGNA A++CLKYVVLANMLALSDINPFAAREAKVY E++EI AM  LR AY+ N+L +FERTLR   N+ILDDPF+M YI+PLR +M EQVL++LV+PY K+++ F+++ELK+  +EVE L+++MILD R  G+IDQ+ G L+LG  + S++ K+Y+A+ RW+DAL GL  AL  ++ V
Sbjct:  189 DDPAKGTSLLEVYALEIQLCTATRNAARMREVYPKTLNLNAAVADPRIMGVIREEGGKMHMAAGRWAEAYNEFYEGFRSHQEAGNARARDCLKYVVLANMLALSDINPFAAREAKVYQEDREITAMMALRQAYDANELAKFERTLREDRNRILDDPFIMSYIEPLRHKMREQVLISLVQPYNKVSMKFLSQELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKIQV 449          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.010e-109
Identity = 166/260 (63.85%), Postives = 207/260 (79.62%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVS 261
            DDP K +YLLEVY L IQLC+ TK+S+ MKQ+YPK + LNAAV DPRIMGVIRE+GGKMYM    WD AYNEFYEGFR +QEAGN  AK+ LKYVVLANMLALS+INPF+AREA  Y E+ EI+AMR LR AYE NDL  FE+TL +++NKI+ DPF+M Y++PLRRRM EQVLLAL+RPY++I + FVA+ELKL    VE LL+ MI+D+RI G+IDQ++G+LLL   + S+S+K+YDA+ +W   L  LT  L+ RV+
Sbjct:  214 DDPTKGTYLLEVYALEIQLCTATKSSSRMKQIYPKTLNLNAAVADPRIMGVIREEGGKMYMSESRWDDAYNEFYEGFRGFQEAGNPRAKDALKYVVLANMLALSEINPFSAREAIAYQEDPEIVAMRNLRSAYEANDLGSFEKTLLDKSNKIIADPFIMTYVEPLRRRMREQVLLALLRPYKRIRIEFVAQELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARVT 473          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.950e-109
Identity = 168/256 (65.62%), Postives = 206/256 (80.47%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALA 257
            DDP K +YLLEVY L IQLC+ TK++A MK +YPK + LNAAV DPRIMGVIRE+GGKMYM    W+ AYNEFYEGFR YQEAGN  AK+ LKYVVLANMLALSDINPFAAREA  + EEKEI+AMR LR AYE NDL  FE TL++++N+IL+DPF+M Y+ PLRRRM EQVLLALVRPY +I L+F+AREL+L  EEVE L++ MIL+ R++G+IDQ++G+LLLGD    L+ K++DA+A WA +L  L   L+
Sbjct:  236 DDPAKGTYLLEVYALEIQLCTATKDTARMKALYPKTLNLNAAVADPRIMGVIREEGGKMYMAEGRWNEAYNEFYEGFRGYQEAGNPRAKDALKYVVLANMLALSDINPFAAREAIAFQEEKEIVAMRSLRTAYEANDLTTFESTLKDKSNRILEDPFIMTYVAPLRRRMREQVLLALVRPYHRIQLSFIARELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEALHAGLS 491          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 315 bits (807), Expect = 3.040e-103
Identity = 159/261 (60.92%), Postives = 198/261 (75.86%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVSV 262
            DD  K +YLLEVYGL+IQLC+ TK++A M++VYP++M+LNA                 MYM    W  AYNEFYEGFRNYQEAGN  AK+CLKYVVLANMLALSDINPFAAREAKVY EEKE+ AM ELR+AYE NDL RFE+TL+N+ N+ILDD F+M Y++PL+RRM EQVLLA+VRPY +I LAF+AREL LP   VE LL+ +ILDER+ G IDQ++G+L +G+  A  S K+Y+A+  W+D L   TTAL  R+++
Sbjct:  166 DDQSKGTYLLEVYGLIIQLCTATKDTARMREVYPRVMQLNA-----------------MYMATGQWSMAYNEFYEGFRNYQEAGNKRAKDCLKYVVLANMLALSDINPFAAREAKVYQEEKEVAAMMELRMAYETNDLARFEKTLQNKANRILDDNFIMAYVEPLKRRMREQVLLAIVRPYRRINLAFMARELNLPEPAVEGLLVELILDERLSGSIDQLQGFLQVGEDDADNSPKKYEALMGWSDELRKATTALTSRIAL 409          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.380e-97
Identity = 156/268 (58.21%), Postives = 199/268 (74.25%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLL--------GDGRASLSNKR------------YDAIARWADAL 249
            DD  K + LLE+Y L IQLC+V+ NS  MKQ+YPK M LNAAV DPRIMG+IRE+GGKM M   NW+ AYNE YE FRNYQEAGNA A++ LKYVV+A+ML +SDINPFAAREAKV+ ++KEI+AM +LR   E NDL RFERT++N+ NKILD+PF+M YI PLRRRM EQVLL L RPY+K+T+AF+AREL L  +EVESLL+ MILD+++   IDQ++G+++L          G+AS + +             + +I +WADAL
Sbjct:   96 DDLSKGTLLLEIYCLEIQLCAVSHNSLRMKQIYPKTMNLNAAVADPRIMGIIREEGGKMQMSEGNWEDAYNELYESFRNYQEAGNARARDILKYVVVASMLTVSDINPFAAREAKVFSDDKEIVAMSDLRQCLEANDLARFERTIKNKQNKILDEPFLMTYIQPLRRRMREQVLLNLTRPYKKVTVAFLARELALNVDEVESLLVDMILDQKLSAHIDQIKGHVILEQSATADGASGQASSAGQNLSRNSQNAQDALFASINKWADAL 363          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA)

HSP 1 Score: 290 bits (743), Expect = 4.630e-93
Identity = 147/249 (59.04%), Postives = 197/249 (79.12%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLG-DGRASLSNKRYDAIARWADAL 249
            DD  K++YL+EVY L I  C+ T + A MK++ P+ ++LNAAV DPRIMG+IRE+GGK++M    W  AY+EF EGFR YQEAGN+ AK+CLKY  L+N+LA S INPFAA EAKVY +++E+MAM ELR+AY+ NDL RFERTL ++ N ILDD F+  YI+ LRRRM EQVLL++ +PY K+TLA VA+EL+L  EE+ESLL+ +ILD+RI+G+IDQ+ G++LL  +GR+S  + ++ A+ARWADAL
Sbjct:  191 DDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSS--SGKHAALARWADAL 437          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7R9YB37_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB37_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.960e-92
Identity = 142/260 (54.62%), Postives = 193/260 (74.23%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDG-RASLSNKRYDAIARWADALGGLTTALADRV 260
            DD  K SYLLE Y L IQLC+ T N++ MK++YPK   LNAAV DPRIMG+IRE+GGKM+MG+ +W  AYNEFY  FRNYQE GN  AK CLKYVVL+NMLALSDINPFAAREAKV+ +++EIMAM +LR+AYE +D++ F+R L+N++NKIL+D ++  +++ LR RM E VLLA+V+PY +I +  VA+EL + ++ VE +++++ILD R++GRIDQV G ++L  G  A    K Y+ +  W  AL      +  +V
Sbjct:  185 DDLPKGSYLLEAYALEIQLCTQTHNTSRMKEIYPKTEALNAAVADPRIMGIIREEGGKMFMGLGSWSEAYNEFYAAFRNYQEGGNPRAKTCLKYVVLSNMLALSDINPFAAREAKVFQDDREIMAMMDLRMAYESSDMQGFDRILQNKSNKILEDEYLKMFVERLRNRMRESVLLAMVKPYVRIEMRSVAQELNIESDAVEKIVVNLILDGRVKGRIDQVHGCIILDKGTEAQTVGKEYEGLRGWCKALHDFNEHICAKV 444          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S4ECH3_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECH3_9STRA)

HSP 1 Score: 288 bits (736), Expect = 4.400e-92
Identity = 144/258 (55.81%), Postives = 192/258 (74.42%), Query Frame = 0
Query:    2 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADR 259
            DD  K + LLE Y L I LC+ T+++  MK++YP+ + LNAAV DPRIMGVIRE+GG+M+M   N+  AYNEFY GFR YQEAGN+ AK+CLKYVVLANMLALSDINPF AREAK Y EE E+ AMR LR++Y+ NDL +FE TL ++ N I  DPF+M+Y+DPLRRRM EQVLL+LV+PY ++ L F+A +L+L   +VE ++++MILD+RI G +D +E +L+L         K++  +A+WA AL  L   +A+R
Sbjct:  193 DDSSKGTSLLEAYALEISLCAATRDARRMKRIYPRTLNLNAAVADPRIMGVIREEGGRMHMRDANFAEAYNEFYAGFRAYQEAGNSRAKDCLKYVVLANMLALSDINPFDAREAKAYQEETEVAAMRRLRVSYDANDLRQFETTLTDKRNNIQSDPFLMEYVDPLRRRMREQVLLSLVKPYRRVKLDFLAGKLQLSESDVEQIVVAMILDDRIEGEVDMLEKHLVLSGKE---EGKKHRELAKWAGALESLAKGMANR 447          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI2.280e-11264.23COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE6.150e-11163.85COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6V1ITC2_HETAK8.450e-11162.07COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2BKS2_9STRA1.010e-10963.85COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S2W4K8_9STRA1.950e-10965.63COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A836CJA4_9STRA3.040e-10360.92COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A7S3M6V7_9STRA1.380e-9758.21COP9 signalosome complex subunit 2 n=1 Tax=Spumell... [more]
W7U093_9STRA4.630e-9359.04COP9 signalosome complex subunit 2 n=2 Tax=Monodop... [more]
A0A7R9YB37_9STRA1.960e-9254.62COP9 signalosome complex subunit 2 n=1 Tax=Pinguio... [more]
A0A7S4ECH3_9STRA4.400e-9255.81COP9 signalosome complex subunit 2 n=1 Tax=Pelagom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 161..245
e-value: 1.1E-18
score: 78.1
NoneNo IPR availableGENE3D1.25.40.570coord: 1..262
e-value: 7.2E-71
score: 241.2
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 2..256
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 161..245
e-value: 1.1E-18
score: 78.1
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 126..227
e-value: 1.1E-19
score: 70.8
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 70..232
score: 23.50115
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 2..256
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 155..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7018contigP-wetherbeei_contig7018:596..3107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7018.1.1mRNA_P-wetherbeei_contig7018.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7018 596..3107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7018.1.1 ID=prot_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIM
GVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLAN
MLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRT
NKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEE
VESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALG
GLTTALADRVSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR037750COPS2
IPR036390WH_DNA-bd_sf