mRNA_P-wetherbeei_contig7017.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: D8LCN1_ECTSI (Breast cancer 2 like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN1_ECTSI) HSP 1 Score: 107 bits (268), Expect = 4.420e-25 Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 7 ELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYS 294
RE L+R G D L TP+WV NH RW++WKLA +ER P + G L L RQL+ RY VE++++ K +KAVLQGDA AA MVLCVSR+Y+
Sbjct: 2823 SFREELLRSGRDGQLATPIWVQNHTRWIVWKLAAMERRFPEHFPGGYLTAGRLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYT 2918
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A5P1E9X0_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E9X0_ASPOF) HSP 1 Score: 100 bits (250), Expect = 1.160e-22 Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 7 ELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLPRP 306
R L+ GA T WVANH +W++WKLA LER +P + G+ L S L +L+ RYE E+N +SAIK +L GD+ AS MVLC+S IYS P P
Sbjct: 721 NFRNMLLHSGASPSTATKEWVANHYKWIVWKLACLERCYPAKASGKFLTMSNALEELKYRYEREVNYGHRSAIKRILDGDSSPASMMVLCISSIYSSPSP 820
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A0E0JEH0_ORYPU (Tower domain-containing protein n=2 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0JEH0_ORYPU) HSP 1 Score: 100 bits (250), Expect = 1.170e-22 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E ++ L+ CGA T WV+NH +W++WKLA LER +P R G+ L+ +L +L+ RY+ E+N +SAIK +L+G+A + MVLC+S IYS P
Sbjct: 930 AEEFQKMLLACGASLTYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLKVGNVLEELKYRYDREVNNGHRSAIKKILEGNASPSLMMVLCISAIYSCP 1029
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A0E0MRS3_ORYRU (Tower domain-containing protein n=36 Tax=Oryza TaxID=4527 RepID=A0A0E0MRS3_ORYRU) HSP 1 Score: 100 bits (249), Expect = 1.590e-22 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E ++ L+ CGA T WV+NH +W++WKLA LER +P R G+ L+ +L +L+ RY+ E+N +SAIK +L+G+A + MVLC+S IYS P
Sbjct: 931 AEEFQKMLLACGASLTYTTKEWVSNHYKWIVWKLASLERCYPTRAAGKFLKVGNVLEELKYRYDREVNNGHRSAIKKILEGNASPSLMMVLCISAIYSCP 1030
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A6G1E751_9ORYZ (Tower domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1E751_9ORYZ) HSP 1 Score: 100 bits (248), Expect = 2.180e-22 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E ++ L+ CGA T WV+NH +W++WKLA LER +P R G+ L+ +L +L+ RY+ E+N +SAIK +L+G+A + MVLC+S IYS P
Sbjct: 903 AEEFQKMLLTCGASLTYTTKEWVSNHYKWIVWKLASLERCYPTRAAGKFLKVGNVLEELKYRYDREVNNGHRSAIKKILEGNASPSLMMVLCISAIYSSP 1002
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A1D6J348_MAIZE (Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6J348_MAIZE) HSP 1 Score: 98.2 bits (243), Expect = 3.300e-22 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E ++ L+ CGA T WV+NH +W++WKLA LER +P R G+ L +L +L+ RY+ E+N +SAIK +L+G++ + MVLC+S IYS P
Sbjct: 64 AEEFQKMLLTCGASLSCATKEWVSNHYKWIVWKLASLERCYPTRVAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGNSSPSLMMVLCISAIYSCP 163
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A109NDH2_SORBI (Tower domain-containing protein (Fragment) n=11 Tax=Sorghum bicolor TaxID=4558 RepID=A0A109NDH2_SORBI) HSP 1 Score: 99.0 bits (245), Expect = 5.430e-22 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E ++ L+ CGA T WV+NH +W++WKLA LER +P R G+ L +L +L+ RY+ E+N +SAIK +L+G+A + MVLC+S IYS P
Sbjct: 365 AEEFQKMLLTCGASLSCATKEWVSNHYKWIVWKLASLERCYPSRAAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGNASPSLMMVLCISAIYSCP 464
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A811MHR1_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811MHR1_9POAL) HSP 1 Score: 99.0 bits (245), Expect = 5.520e-22 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E ++ L+ CGA T WV+NH +W++WKLA LER +P R G+ L +L +L+ RY+ E+N +SAIK +L+G+A + MVLC+S IYS P
Sbjct: 842 AEEFQKMLLTCGASLSCATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGNASPSLMMVLCISAIYSCP 941
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A0D9UX45_9ORYZ (Tower domain-containing protein n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9UX45_9ORYZ) HSP 1 Score: 99.0 bits (245), Expect = 5.530e-22 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A E + L+ CGA T WV+NH +W++WKLA LER +P R G+ L+ +L +L+ RY+ E+N +SA+K +L+G+A + MVLC+S IYS P
Sbjct: 961 AEEFQTMLLACGASLTYATKEWVSNHYKWIVWKLASLERCYPTRAPGKFLKIGNVLEELKYRYDREVNNGHRSAVKKILEGNASPSLMMVLCISTIYSCP 1060
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: UPI0019D5A2C3 (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X3 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5A2C3) HSP 1 Score: 98.6 bits (244), Expect = 7.550e-22 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 AWELREALMRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 300
A + ++ L+RCGA T WV+NH +W++WKLA LER +P R G+ L + +L+ RY+ E+N +SAIK +L+G+A + MVLC+S IYS P
Sbjct: 950 AEDFQKMLLRCGASLSYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVFEELKYRYDREVNHGHRSAIKKILEGNASPSLMMVLCISAIYSCP 1049 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7017.1.1 >prot_P-wetherbeei_contig7017.1.1 ID=prot_P-wetherbeei_contig7017.1.1|Name=mRNA_P-wetherbeei_contig7017.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQback to top mRNA from alignment at P-wetherbeei_contig7017:99..404- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7017.1.1 ID=mRNA_P-wetherbeei_contig7017.1.1|Name=mRNA_P-wetherbeei_contig7017.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig7017:99..404- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7017:99..404- >mRNA_P-wetherbeei_contig7017.1.1 ID=mRNA_P-wetherbeei_contig7017.1.1|Name=mRNA_P-wetherbeei_contig7017.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig7017:99..404- (Phaeothamnion wetherbeei SAG_119_79)back to top |