mRNA_P-wetherbeei_contig7010.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A6H5K8F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F0_9PHAE) HSP 1 Score: 310 bits (793), Expect = 4.390e-88 Identity = 149/269 (55.39%), Postives = 207/269 (76.95%), Query Frame = 2
Query: 647 PLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLVWRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLVVDGEVVYDKFRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPLVPLQAFDVDIGDNARIEHIDIRDGRLTVRARFVLSPIPPLVVADVSKRAAFRYDLGERLSISFGGLVDN 1453
PL S++L W ER I RA VEGLEV V A+SNR A+SG LQ+VGI ++ L L LQI+GGA++ IT +DLKV+ L+W+RF +FK+PFE+ G YV T+ D+ S ++RRLV M+N+TLRKLE AT+ ++++ I + +V K+S+LV++GE+ YD +VPF YRT +G+ +GHVVYL+D EVFW+N+GGSL+LPL+PL+ FDVD+G+ ARIE I I +G++ ++AR V+SP PPL+VA V KRAAFR+D+ ERLS++FG LV N
Sbjct: 496 PLWSKILVWVLERAITNRAMLVEGLEVSVDARSNREAMSGLLQSVGITFNHLELENLQISGGARMNITNLDLKVMTLLWKRFGSFKKPFEIEGSYVLTSEDLSTSSIVRRLVTNMMNSTLRKLETLATE--PLRKSSITITQVSAKRSRLVIEGEMAYDSAKVPFTYRTSIGVKGKGHVVYLKDAEVFWENIGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASVRKRAAFRFDVAERLSVTFGNLVQN 762
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: D7G8F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F0_ECTSI) HSP 1 Score: 266 bits (679), Expect = 8.860e-75 Identity = 132/269 (49.07%), Postives = 186/269 (69.14%), Query Frame = 2
Query: 647 PLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLVWRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLVVDGEVVYDKFRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPLVPLQAFDVDIGDNARIEHIDIRDGRLTVRARFVLSPIPPLVVADVSKRAAFRYDLGERLSISFGGLVDN 1453
PL S++L W FER I RA VEGLE I+GGA++ IT +DLKV+ L+W+RF +FK+PFE+ G YV T+ D+ S ++RRLV M+N+TLRKLE AT+ ++++ I + +V+ K+S+LV++GE+ YD +VPF YRT +G+ +GHVVYL+D EVFW+NVGGSL+LPL+PL+ FDVD+G+ ARIE I I +G++ ++AR V+SP PPL+VA + KRAAFR+D+ ERLS++FG LV N
Sbjct: 269 PLWSKILVWVFERAITNRAMLVEGLE--------------------------------ISGGARMNITNLDLKVMTLLWKRFGSFKKPFEIEGSYVLTSEDLSTSSMVRRLVTNMMNSTLRKLETLATE--PLRKSSITITQVLAKRSRLVIEGEMAYDSAKVPFTYRTSIGVKGKGHVVYLKDAEVFWENVGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASLRKRAAFRFDVAERLSVTFGNLVQN 503
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A835YIN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN5_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.180e-55 Identity = 123/279 (44.09%), Postives = 165/279 (59.14%), Query Frame = 2
Query: 644 IPLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLVWRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLVVDGEV-VYDKFRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPL-------VPLQAFDVDIGDNARIEHIDIRDGRLTVRARFVLSPIPPLVVADVSKRAAFRYDLGERLSISFGGLVDNA 1456
IP+T + L W ++I RA RVEGL++ V A SNR+ALSG+L+TV + LALP +QITGGA + +TGVDLK+L L+ RR AFK+PF+V G +VFT++D V S IR +VQA+L A+ L A + V RV IK ++V+D V +F N L S GHVV LR + + N G +P D+GDN RIE + IR+GR T+R FV++P PPL+VADV KR RYD+GER+S ++DNA
Sbjct: 102 IPVTGKALSWMLAQIIYKRALRVEGLDLLVQAASNRKALSGNLKTVWCKFRTLALPAIQITGGANMVVTGVDLKMLLLMHRRLGAFKKPFQVRGEWVFTSNDFVASNAIRNMVQAILTASFNALSLGA----------VRVTRVSIKGDRIVIDARSSVLQRFSCSAN----LATSSDGHVVSLRS--LRYSNQAGEFLFQTPWQLAATLPRDLVSCDMGDNTRIEALTIRNGRATLRGCFVVTPTPPLIVADVGKRGMVRYDVGERISAIVSDVLDNA 364
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A836CBR5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR5_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.910e-48 Identity = 107/251 (42.63%), Postives = 147/251 (58.57%), Query Frame = 2
Query: 725 VFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLVWRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLVVDGEVVYDKFRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPL-------VPLQAFDVDIGDNARIEHIDIRDGRLTVRARFVLSPIPPLVVADVSKRAAFRYDLGERLSISFGGLVDNA 1456
+ V A SNR ALSG+L+ V IN+ LALPQ+QITGGA + +TGVDLK+L+L+ RR AFK+PF+V G + FTN+D + SP IR +VQ +L A+ +L + V RV I +++ +G + F+ L S+ GHV+ LR + + N G +P D+GDN RIE + IR+GRLTVR FV++P PPL+VADV KR RYD+GERLS ++D A
Sbjct: 1 MLVEASSNRDALSGNLKNVWINFKTLALPQMQITGGASMVVTGVDLKMLYLMHRRLGAFKKPFQVRGEWSFTNNDFIASPAIRNMVQNILAASFARLN----------LGPVRVSRVSISGDRILFEG---HSDILQRFSCSANLATSQDGHVISLRSLK--YGNQAGEYLFQTPWQVAATLPKDLVSCDMGDNTRIEALSIRNGRLTVRGMFVVTPTPPLIVADVGKRGMVRYDVGERLSALVSEVLDRA 236
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A4D9D3X5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X5_9STRA) HSP 1 Score: 179 bits (455), Expect = 6.730e-47 Identity = 111/272 (40.81%), Postives = 164/272 (60.29%), Query Frame = 2
Query: 638 ERIPLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVL-FLVWRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLVVDG--EVVYDKFRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGG-SLTLPLVPLQAFDVDIGDNARIEHIDIRDGR-LTVRARFVLSPIPPLVVADVSKRAAFRYDLGERLSISFG 1438
ER P+ S V++ +++R A RV GL+V V A+SN L+G+L V + + L LQI+GG +++ITG+++++L L+ RR ++PFEV G YV T DV S LIR +VQ ++N LR L + + I+ +R+ ++ KL V G V +PF TG+G++ GH+VYL DPE+ + + +PL ++AFDVDIGDNARIE ++I + R +TV AR +++P PP V DV KRAAF YD+G S FG
Sbjct: 3 ERKPILSTVVEVLASKLVRKTARRVTGLDVDVGARSNSDVLAGNLPLVKAKFSRIVLENLQISGGGRMEITGLNIRLLALLLARRLSLIRKPFEVCGEYVLTQQDVSASKLIRDMVQLLVNNVLRTL--FPSLHLTFFDVSIDSVRISPRR-KLAVHGTANVAESASGMPFTLLTGVGLAGDGHIVYLDDPELVLNPKAPLPVKVPLGSIRAFDVDIGDNARIERLEIDEARGVTVTARTLITPAPPFQVTDVGKRAAFLYDMGAFFSSFFG 271
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: W7TXL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXL0_9STRA) HSP 1 Score: 179 bits (455), Expect = 7.660e-46 Identity = 111/272 (40.81%), Postives = 164/272 (60.29%), Query Frame = 2
Query: 638 ERIPLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVL-FLVWRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLVVDG--EVVYDKFRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGG-SLTLPLVPLQAFDVDIGDNARIEHIDIRDGR-LTVRARFVLSPIPPLVVADVSKRAAFRYDLGERLSISFG 1438
ER P+ S V++ +++R A RV GL+V V A+SN L+G+L V + + L LQI+GG +++ITG+++++L L+ RR ++PFEV G YV T DV S LIR +VQ ++N LR L + + I+ +R+ ++ KL V G V +PF TG+G++ GH+VYL DPE+ + + +PL ++AFDVDIGDNARIE ++I + R +TV AR +++P PP V DV KRAAF YD+G S FG
Sbjct: 94 ERKPILSTVVEVLASKLVRKTARRVTGLDVDVGARSNSDVLAGNLPLVKAKFSRIVLENLQISGGGRMEITGLNIRLLALLLARRLSLIRKPFEVCGEYVLTQQDVSASKLIRDMVQLLVNNVLRTL--FPSLHLTFFDVSIDSVRISPRR-KLAVHGTANVAESASGMPFTLLTGVGLAGDGHIVYLDDPELVLNPEAPLPVKVPLGSIRAFDVDIGDNARIERLEIDEARGVTVTARTLITPAPPFQVTDVGKRAAFLYDMGAFFSSFFG 362
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: D8LB91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB91_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.160e-36 Identity = 108/326 (33.13%), Postives = 152/326 (46.63%), Query Frame = 2
Query: 635 GERIPLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLV---WRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYAT--------------------------------------DRRAVQRTG-----INVLRVMIKKSKLVVDGEVVYDK--FRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPLVPLQAFDVDIGDNARIEHIDIRDGRLTVRARFVLSPIPPLVVADVS-KRAAFRYDLGERLSISFGGLVDNAFRL 1465
G R P TS +W +R I A L V V A++NR A+ G +++ I++ +Q++GGA ++ GVD+ L L+ WRR +RP E G FT+ DV SP IRRL Q ++N LR A + Q+ G ++VL V + +KL ++GE+ RVPF Y L S GHV+Y + V+W GG + LP++PLQ+F +D+GD ARIEH+ I G L++ RF+L+ P VA KR YDL E LS LV N L
Sbjct: 15 GGRRPFTSHAARWFIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGA-FELLGVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALRPRAKRAAVAXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXSEQQQGGLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASADGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSLGGRFILTNTPGFTVALPGLKRGDINYDLAESLS----RLVSNCLNL 335
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A6H5K9J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J0_9PHAE) HSP 1 Score: 154 bits (388), Expect = 1.840e-36 Identity = 108/321 (33.64%), Postives = 153/321 (47.66%), Query Frame = 2
Query: 635 GERIPLTSRVLKWAFERVIRMRATRVEGLEVFVSAKSNRRALSGDLQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLV---WRRFMAFKRPFEVSGYYVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYA---------------------------------TDRRAVQRTG-----INVLRVMIKKSKLVVDGEVVYDK--FRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPLVPLQAFDVDIGDNARIEHIDIRDGRLTVRARFVLSPIPPLVVADVS-KRAAFRYDLGERLSISFGGLVDNAFRL 1465
G R P TS +W +R I A L V V A++NR A+ G +++ I++ +Q++GGA ++ GVD+ L L+ WRR +RP E G FT+ DV SP IRRL Q ++N L+ A + Q+ G ++VL V + +KL ++GE+ RVPF Y L S+ GHV+Y + V+W GG + LP++PLQ+F +D+GD ARIEH+ I G L+V RF+L+ P VA KR YDL E LS LV N L
Sbjct: 111 GGRRPFTSHAARWFIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGA-FELLGVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALQPRAKRAGVVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAQQQGRLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASQDGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSVGGRFILTNTPGFTVALPGLKRGDINYDLAEGLS----RLVSNCLNL 426
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A7S1Z9Q4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z9Q4_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.110e-12 Identity = 69/212 (32.55%), Postives = 104/212 (49.06%), Query Frame = 2
Query: 770 LQTVGINWDALALPQLQITGGAKVQITGVDLKVL--------FLVWRRFMAFKRPFEVSGY-YVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLV-VDGEVVYDK-FRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGGSLTLPLVPLQAF----DVDIGDNARIEHIDI--RDGRLTVRARFVLSP 1354
L V IN++ L L+++GG ++ I + LK+L L ++ F PFE +FT D++ SP IR +Q +LN L K + T + V V I SK V +G+ + +VPF RTGL +S RGHV+ L E+ + P P Q F DVD+G NA+IE + I + G+L++ AR ++P
Sbjct: 177 LSDVQINFERLVFHNLRMSGG-RIDIKRMSLKILANVPSLRRVLGNKKIHCFPSPFEFHAQDCIFTQDDIIQSPCIRNGIQNLLNHILNKSGFLSA-------TSVTVSSVKILSSKKVSCEGKAITALGTQVPFEVRTGLDVSSRGHVLLLPGLEIALN--------PAFPFQMFVPEVDVDLGHNAQIESLIINGKRGKLSLSARATVTP 372
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Match: A0A7S4RBJ8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBJ8_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.260e-12 Identity = 71/209 (33.97%), Postives = 109/209 (52.15%), Query Frame = 2
Query: 770 LQTVGINWDALALPQLQITGGAKVQITGVDLKVLFLV--WRRFMAFKR------PFEVSGY-YVFTNSDVVGSPLIRRLVQAMLNATLRKLEDYATDRRAVQRTGINVLRVMIKKSKLV-VDGEVVYDK-FRVPFNYRTGLGISKRGHVVYLRDPEVFWDNVGG-SLTLPLVPLQAFDVDIGDNARIEHIDI--RDGRLTVRARFVLSP 1354
L V IN++ L L+++GG ++ I + LK+L V RR + K+ PFE +FT D++ SP IR +Q +LN L K + T + V V I SK V +G+ + +VPF RTGLG+S RGHV+ L E+ + + +P+VP DVD+G NA+IE + I + G+L++ AR ++P
Sbjct: 292 LSDVQINFERLVFHNLRMSGG-RIDIKRMSLKILANVPSLRRVLGNKKIHRFPSPFEFHAQDCIFTQDDILQSPCIRNGIQNLLNHILNKSGFLSA-------TSVTVSSVKILSSKKVSCEGKAITALGTQVPFEVRTGLGVSSRGHVLLLPGLEIALNPAFPFQMFVPVVP--EVDVDLGHNAQIESLIINGKRGKLSLSARATVTP 490 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7010.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7010.3.1 >prot_P-wetherbeei_contig7010.3.1 ID=prot_P-wetherbeei_contig7010.3.1|Name=mRNA_P-wetherbeei_contig7010.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=472bp MSPLFAAGLLDSGGNRRRRRYAPGRKRRMVKALVRYLLTGDRGGAEEFWEback to top mRNA from alignment at P-wetherbeei_contig7010:55..3185+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7010.3.1 ID=mRNA_P-wetherbeei_contig7010.3.1|Name=mRNA_P-wetherbeei_contig7010.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3131bp|location=Sequence derived from alignment at P-wetherbeei_contig7010:55..3185+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7010:55..3185+ >mRNA_P-wetherbeei_contig7010.3.1 ID=mRNA_P-wetherbeei_contig7010.3.1|Name=mRNA_P-wetherbeei_contig7010.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1416bp|location=Sequence derived from alignment at P-wetherbeei_contig7010:55..3185+ (Phaeothamnion wetherbeei SAG_119_79)back to top |