mRNA_P-wetherbeei_contig7005.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7005.1.1
Unique NamemRNA_P-wetherbeei_contig7005.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A3C0TU63_9PROT (CoA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TU63_9PROT)

HSP 1 Score: 287 bits (734), Expect = 1.440e-97
Identity = 145/160 (90.62%), Postives = 151/160 (94.38%), Query Frame = 1
Query:    1 MENEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRRRV 480
            MENE YSDE +  ILKATKTIAVVG SPE NRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLA+IPFPVDMVD+FR SDAAGQ++DEAIAIKAK VWMQLGVRNPAAAARARAAGL V+MDRCSKIEYGRLSGQIGFMGVDTGIINNSRRRRV
Sbjct:    1 MENEQYSDEKLSKILKATKTIAVVGASPEPNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLAEIPFPVDMVDVFRASDAAGQVTDEAIAIKAKCVWMQLGVRNPAAAARARAAGLDVVMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRRRV 160          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A3N1M2J9_9PROT (CoA_binding domain-containing protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M2J9_9PROT)

HSP 1 Score: 209 bits (532), Expect = 8.540e-67
Identity = 103/160 (64.38%), Postives = 128/160 (80.00%), Query Frame = 1
Query:    1 MENEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRRRV 480
            ME++ Y+DE I  IL+ TKTIA+VG SP  NRPS+ VM++LQ +GFR++PVNPRA GQ ILGE VYASLAD+P PVDMVD+FR +DA   I DEAIAI AK VWMQLGVR+  AAA+A AAG+KV+M+RC KIEYGR SG++ + G D+GII + R R+V
Sbjct:    1 MEHDRYADEYIAGILRETKTIAMVGASPNWNRPSFFVMKYLQGKGFRVIPVNPRAAGQEILGETVYASLADVPVPVDMVDVFRAADAVPGIVDEAIAIGAKVVWMQLGVRHDEAAAKAEAAGIKVVMNRCPKIEYGRHSGELSWGGFDSGIITSRRTRKV 160          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A420WQ87_9PROT (CoA_binding domain-containing protein n=4 Tax=Oceanibaculum TaxID=659693 RepID=A0A420WQ87_9PROT)

HSP 1 Score: 202 bits (514), Expect = 7.630e-64
Identity = 98/156 (62.82%), Postives = 124/156 (79.49%), Query Frame = 1
Query:    7 NEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRR 474
            +E Y D LI  IL+  K IA+VG SP+ NRPSY  M++LQ +G+R++PVNP+  G  ILGEKVYASLADIP  +DMVD+FR S AAG I+DEAIAI AK VWMQLGVRN  AAARA AAG+ VIM+RC KIEYGRL+G++G+ G ++G+I++ RR+
Sbjct:   15 HETYPDALIRRILREVKVIAMVGASPDWNRPSYFAMKYLQSKGYRVIPVNPKVAGDEILGEKVYASLADIPEKIDMVDVFRNSAAAGPITDEAIAIGAKVVWMQLGVRNDEAAARAEAAGMTVIMNRCPKIEYGRLNGELGWHGFNSGVISSKRRK 170          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A8J2YVQ3_9PROT (CoA-binding protein n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YVQ3_9PROT)

HSP 1 Score: 200 bits (509), Expect = 2.700e-63
Identity = 99/160 (61.88%), Postives = 127/160 (79.38%), Query Frame = 1
Query:    1 MENEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRRRV 480
            M ++ YSD+ +  IL+ TKTIA+VG SP  NRPSY VM++LQ +GFR++PVNPRA G+ ILGE V A+LAD+P PVDMVD+FR SDAA  I ++AI + AK VWMQ+GVR+ AAAARA AAGL V+M+ C KIEY RL G++G+ GV+TGI+  SRRR+V
Sbjct:    1 MNHDSYSDDYLRGILRRTKTIAMVGASPNWNRPSYFVMKYLQAKGFRVIPVNPRAAGEEILGEPVVATLADVPVPVDMVDVFRASDAAPGIVEDAIKVGAKTVWMQIGVRHDAAAARAEAAGLDVVMNHCPKIEYSRLCGELGWSGVNTGILT-SRRRKV 159          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A081B7S8_9HYPH (Cys/Met metabolism pyridoxal-phosphate-dependent enzymes n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081B7S8_9HYPH)

HSP 1 Score: 198 bits (504), Expect = 1.560e-62
Identity = 96/157 (61.15%), Postives = 123/157 (78.34%), Query Frame = 1
Query:    1 MENEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRR 471
            M    Y+ + +  ILK+ KTIA+VG SP+  RPSY VM++LQK+G+R++PVNP   GQ ILGEKVYASL+DIP  VDMVDIFR+S+AAG I DEAIAI A  VWMQ+GV NP AAA+A AAGLK +MDRC KIEY RLSG+ G+MG+++ +++  R+
Sbjct:    1 MSQTTYTSDYLAGILKSAKTIAMVGASPKSIRPSYIVMKYLQKKGYRVIPVNPGVAGQEILGEKVYASLSDIPEKVDMVDIFRSSEAAGPIVDEAIAIGAASVWMQIGVINPEAAAKAEAAGLKTVMDRCPKIEYSRLSGEAGWMGINSNLVSTRRQ 157          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A7K0A9G3_9ACTN (CoA-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0A9G3_9ACTN)

HSP 1 Score: 194 bits (493), Expect = 7.330e-61
Identity = 96/154 (62.34%), Postives = 120/154 (77.92%), Query Frame = 1
Query:   13 IYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRR 474
            IY D+ I  IL+    IA+VG S   NRPSY VM++LQ++ +R++PVNP A GQ ILGE V ASLADI  PVDMVDIFR S+AAG I+DEAIAI AK VWMQ+GVRN AAAARA+ AGL V+MDRC KIEY RL G++ ++G+++G+I+  RRR
Sbjct:    6 IYDDDYIRGILRRAHVIAMVGASTNWNRPSYFVMKYLQRKSYRVIPVNPAAAGQEILGEPVMASLADIKAPVDMVDIFRNSEAAGPIADEAIAIGAKTVWMQIGVRNDAAAARAKTAGLDVVMDRCPKIEYSRLCGELSWLGMNSGVISAKRRR 159          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A512E476_9PROT (CoA_binding domain-containing protein n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512E476_9PROT)

HSP 1 Score: 194 bits (493), Expect = 8.890e-61
Identity = 91/157 (57.96%), Postives = 121/157 (77.07%), Query Frame = 1
Query:    1 MENEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRR 471
            M+++ Y D  + +IL + KTIA+VG S   NRPSY VM++LQ +GFR++PVNP   G+ +LGE VYA L DIP PVDMVD+FR ++AAG ++D AIAI A+ VWMQ+GVRN  AAARA AAGLKV+M+RC KIEY RL G+IG+ G+++ +I N +R
Sbjct:    1 MQHDTYGDSYLSDILASVKTIAMVGASTNWNRPSYFVMKYLQSKGFRVIPVNPGVAGEQLLGETVYARLEDIPDPVDMVDVFRNAEAAGPVTDSAIAINARIVWMQIGVRNDEAAARAEAAGLKVVMNRCPKIEYMRLHGEIGWNGINSNVITNRKR 157          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: I3TLJ3_TISMK (O-acetylhomoserine/O-acetylserine sulfhydrylase n=6 Tax=Tistrella TaxID=171436 RepID=I3TLJ3_TISMK)

HSP 1 Score: 194 bits (493), Expect = 9.190e-61
Identity = 95/151 (62.91%), Postives = 121/151 (80.13%), Query Frame = 1
Query:   16 YSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSR 468
            Y D  I +IL+ T+ IA+VG SP  NRPSY  M++LQ++G+R++PVNP A GQTILGE VYA+L ++P   DMVDIFR S+AAG I+D+AI + AK VWMQLGVRN AAAARA AAGL V+M+RC KIEYGRLSG++G+ GV+TG+I+  R
Sbjct:   12 YPDAYIRDILRNTRVIAMVGASPNWNRPSYFAMKYLQEKGYRVIPVNPVAAGQTILGEPVYATLDELPVVPDMVDIFRNSEAAGPITDDAIRMGAKTVWMQLGVRNDAAAARAEAAGLNVVMNRCPKIEYGRLSGELGWSGVNTGVISAKR 162          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A7Y8MRF4_9PROT (CoA-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MRF4_9PROT)

HSP 1 Score: 192 bits (487), Expect = 1.250e-59
Identity = 99/156 (63.46%), Postives = 120/156 (76.92%), Query Frame = 1
Query:   16 YSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKF----VWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRR 471
            YS++ I  IL++ KTIA+VG S  + RPS+  M++LQ++GFRI+PVNP A  + ILGEKVYASLADIP PVDMVDIFR+S+AAG+I DE I +K K     VWMQL V N  AAARA AAG KV+MDRC KIEYGRL G IGFMGV+  II+N R+
Sbjct:    7 YSEDYIAGILRSVKTIAMVGASANQIRPSWFAMKYLQEKGFRIIPVNPAAKEEEILGEKVYASLADIPVPVDMVDIFRSSEAAGEIIDEVIRLKEKLCASVVWMQLTVINHEAAARAEAAGFKVVMDRCPKIEYGRLCGDIGFMGVNRRIIDNKRK 162          
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Match: A0A192IMA8_9HYPH (CoA-binding protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IMA8_9HYPH)

HSP 1 Score: 190 bits (482), Expect = 4.760e-59
Identity = 96/160 (60.00%), Postives = 123/160 (76.88%), Query Frame = 1
Query:    7 NEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVPVNPR--ATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKAKFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTGIINNSRRRRV 480
            +E+Y D+ I  +L+ TKTIA+VG S   NRPSY  M++LQ +G+R++PVNP+  A G  ILGEK  ASLA+I  PVDMVD FR SDA   I+D+AI I AK +W+QLGVR+  AA +ARAAGL VI +RC KIEYGRLSG+IG+MGV+TG+I++ R RRV
Sbjct:   11 DEVYPDDEIRRVLRDTKTIAMVGASANWNRPSYFAMKYLQAKGYRVIPVNPKEAAAGNEILGEKAVASLAEIGVPVDMVDCFRNSDAIPPIADDAIGIGAKTLWLQLGVRHDGAAEKARAAGLTVIQNRCPKIEYGRLSGEIGWMGVNTGVISSRRSRRV 170          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7005.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TU63_9PROT1.440e-9790.63CoA-binding protein n=1 Tax=Alphaproteobacteria ba... [more]
A0A3N1M2J9_9PROT8.540e-6764.38CoA_binding domain-containing protein n=1 Tax=Stel... [more]
A0A420WQ87_9PROT7.630e-6462.82CoA_binding domain-containing protein n=4 Tax=Ocea... [more]
A0A8J2YVQ3_9PROT2.700e-6361.88CoA-binding protein n=1 Tax=Aliidongia dinghuensis... [more]
A0A081B7S8_9HYPH1.560e-6261.15Cys/Met metabolism pyridoxal-phosphate-dependent e... [more]
A0A7K0A9G3_9ACTN7.330e-6162.34CoA-binding protein n=1 Tax=Actinomycetia bacteriu... [more]
A0A512E476_9PROT8.890e-6157.96CoA_binding domain-containing protein n=1 Tax=Sker... [more]
I3TLJ3_TISMK9.190e-6162.91O-acetylhomoserine/O-acetylserine sulfhydrylase n=... [more]
A0A7Y8MRF4_9PROT1.250e-5963.46CoA-binding protein n=1 Tax=Alphaproteobacteria ba... [more]
A0A192IMA8_9HYPH4.760e-5960.00CoA-binding protein n=2 Tax=Alphaproteobacteria Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7005contigP-wetherbeei_contig7005:64..546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380394.JADL01000004_gene5735
Preferred nameyccU
PFAMsCoA_binding_2
Model size483
Max annot lvl204441|Rhodospirillales
KEGG koko:K06929
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.09e-64
EggNOG OGsCOG1832@1|root,COG1832@2|Bacteria,1N03D@1224|Proteobacteria,2TUIY@28211|Alphaproteobacteria,2JRXU@204441|Rhodospirillales
DescriptionCoA binding domain
Cds size483
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186951.8565888-CDS-P-wetherbeei_contig7005:63..5461683186951.8565888-CDS-P-wetherbeei_contig7005:63..546Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7005 64..546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7005.1.1prot_P-wetherbeei_contig7005.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7005 64..546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7005.1.1

>prot_P-wetherbeei_contig7005.1.1 ID=prot_P-wetherbeei_contig7005.1.1|Name=mRNA_P-wetherbeei_contig7005.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp
MENEIYSDELIGNILKATKTIAVVGGSPERNRPSYSVMQFLQKRGFRIVP
VNPRATGQTILGEKVYASLADIPFPVDMVDIFRTSDAAGQISDEAIAIKA
KFVWMQLGVRNPAAAARARAAGLKVIMDRCSKIEYGRLSGQIGFMGVDTG
IINNSRRRRV*
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mRNA from alignment at P-wetherbeei_contig7005:64..546-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7005.1.1 ID=mRNA_P-wetherbeei_contig7005.1.1|Name=mRNA_P-wetherbeei_contig7005.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig7005:64..546- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAATGAAATTTACAGCGACGAACTAATCGGCAATATCCTGAAGGC CACCAAAACCATTGCGGTTGTGGGCGGCAGCCCGGAACGCAACCGGCCCA GCTATAGCGTCATGCAGTTTCTGCAAAAACGCGGCTTTCGCATTGTACCG GTGAACCCGCGCGCCACCGGCCAAACTATTCTGGGCGAGAAGGTTTATGC CAGCCTGGCGGACATTCCCTTCCCCGTCGACATGGTGGATATTTTCCGCA CATCGGATGCCGCCGGTCAAATCAGCGATGAGGCCATTGCGATCAAAGCC AAATTCGTCTGGATGCAATTGGGTGTTCGCAATCCCGCCGCCGCCGCGCG CGCCCGCGCCGCCGGACTGAAAGTCATCATGGATCGTTGCAGCAAAATCG AATATGGGCGCCTTTCCGGCCAGATCGGCTTTATGGGCGTAGACACCGGC ATCATCAATAATTCGCGCCGCCGCCGCGTATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7005:64..546-

>mRNA_P-wetherbeei_contig7005.1.1 ID=mRNA_P-wetherbeei_contig7005.1.1|Name=mRNA_P-wetherbeei_contig7005.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig7005:64..546- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAATGAAATTTACAGCGACGAACTAATCGGCAATATCCTGAAGGC
CACCAAAACCATTGCGGTTGTGGGCGGCAGCCCGGAACGCAACCGGCCCA
GCTATAGCGTCATGCAGTTTCTGCAAAAACGCGGCTTTCGCATTGTACCG
GTGAACCCGCGCGCCACCGGCCAAACTATTCTGGGCGAGAAGGTTTATGC
CAGCCTGGCGGACATTCCCTTCCCCGTCGACATGGTGGATATTTTCCGCA
CATCGGATGCCGCCGGTCAAATCAGCGATGAGGCCATTGCGATCAAAGCC
AAATTCGTCTGGATGCAATTGGGTGTTCGCAATCCCGCCGCCGCCGCGCG
CGCCCGCGCCGCCGGACTGAAAGTCATCATGGATCGTTGCAGCAAAATCG
AATATGGGCGCCTTTCCGGCCAGATCGGCTTTATGGGCGTAGACACCGGC
ATCATCAATAATTCGCGCCGCCGCCGCGTATAA
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