mRNA_P-wetherbeei_contig7002.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7002.1.4
Unique NamemRNA_P-wetherbeei_contig7002.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A835YPR6_9STRA (Polycystin cation channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPR6_9STRA)

HSP 1 Score: 288 bits (738), Expect = 8.850e-85
Identity = 188/580 (32.41%), Postives = 278/580 (47.93%), Query Frame = 1
Query:    1 YLLFLTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPM-GSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTAIIALDV-RRTGLKAYTVQFWNLMDVLNVAIFWVQFV--LAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVIT----------------------------------------------LFLFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVL-GNLEIDPLRAVAPIIGPFLFVSFIIL 1587
            Y++F  + L Y+YVG  ++  +W   S+   FV   F  R  ++D+ TPA W+ WA  VL+PTL P   YNG+P+P E+  +IAG G  R+G ARLRQ+R++  TCAV  RF DS+  C  P+  D +D   W      WA    LD T Y+G+ +                                                                                 +YPG GY TLLPD+   A T+L  LYNAT++D +TR VF E +++N     FS   +AAEV+AAG +VP+YY+ T  + G W S  +   T T D   F    AL++ V  +T  +   + RR GL     + W  ++ +NV +FW QF   LA  +W  + + +++F  R+ F  +F +  V E  +   A N  +T                                              L LFF++V F  GLNQ ++TL RS  D++++ V+I I++ G+A+SFML FG A+A++R+F+EA ATLF  VL  ++++  LRAV P +GPFL+V+FI+L
Sbjct:  147 YIVFAGILLAYLYVG-STADAYWQTYSIESSFVSPTFSPRVTYLDIRTPAQWFDWAEAVLVPTLLPTQYYNGDPIPAERARYIAGDGGMRLGQARLRQVRIKRDTCAVSRRFNDSIGECNVPFEPDAQDTEPWRELGLEWASSMALDQTGYVGASTLA-------------------------------------------------------------------------------IYPGGGYATLLPDDQAQALTMLATLYNATWIDQRTRAVFAEFSVFNPANRLFSMVVLAAEVTAAGEVVPTYYVRTLDLLGGW-SLAKGQATAT-DLAGFVLLIALYVAVLAKTLTLVAQLGRRKGLWK---EPWTWLEGVNVGLFWAQFGMGLAVTLWI-LAKGDEEFGRREGFARLFHITSVYENMRSATALNAALTTAVHLPMMLIACHANCSLTHAAPALPHSXXXXXXXXXXXXXXXXXXLMLFFQFVGFSKGLNQVNETLTRSWRDLLVVLVVITIIVVGYALSFMLTFGKAMAEFRNFSEACATLFIGVLTASMDVARLRAVQPGLGPFLYVTFIVL 640          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A2B4SV82_STYPI (Polycystic kidney disease and receptor for egg jelly-related protein n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SV82_STYPI)

HSP 1 Score: 136 bits (343), Expect = 4.180e-30
Identity = 148/564 (26.24%), Postives = 233/564 (41.31%), Query Frame = 1
Query:    1 YLLFLTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDW---------AAANATWAPKRELD----------MTNYIGSQSKVR-----------VSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHL--LPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILV-----AYRTAIIALDVRRTGLKAYTVQFWNLMDV-LNVAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSF 1578
            Y LFL + +   Y  RD +  + +  +L + FV    Q+   F D +    +W W R  L+P LYP   YN     D+   FI+    + VG++RLRQ RV+  +C V E F     +CYA Y++ +ED  D+         +A +     KR +           +    G Q KVR            SG ++     R R G  +     +  ++L +++L  GSI +    CP           +R +H  +  L   P   R TLY G GY   L  +Y  A TV+  L++  ++D QTR VFVE T+YN N   F    +  E    G   P  + +   + S++          G   +F   C +++++      YR        RR    AY   F+N M+V L +  F +  +    +W   + L     +   FV+        E   VIM     +    F +   F+  +     TLG  +  + M C+   IV   +A    L FG     +R+F   + T  S VLG+ + D  ++   ++GP  F SF
Sbjct: 2417 YFLFLILLMLVAYGNRDPNT-YLLRKTLHETFVDLD-QTGVDFSDASDLELFWHWNRETLIPNLYPGVLYNNKS--DKYTGFISDRNNYLVGISRLRQARVEKDSCEVDEHFTSFFDKCYAEYSLLNEDTEDYDIGWKFLNKSAGDVKSRRKRSVQEQFAFRKGDKILKGFGEQPKVRRRRTIEPVYTSTSGRQQRK---RKRPGSTA-----KNYYVLNSAILPDGSIVS----CP-----------SRWLHNSALELRGYPFWGRLTLYNGGGYPAELGYDYPTALTVVADLHSHNWVDPQTRSVFVEFTVYNANTNLFGIAFMFVEFLPTGGGFPYAHFAVARLYSYV----------GPFANFILACQIFLILFMLYFMYREGKQMYKQRR----AYFRGFFNWMEVTLIICEFAMVILYFARLWEVDKNLMKLRYNPKDFVSFQYAGAADESLTVIMGVLVFLVTLRFLKLFRFNKRMALIGSTLGAVAKPLGMFCISFMIVYIAYATMAWLAFGIENDKFRNFLVVLETQMSIVLGDFDYDEFQSANRLLGPIYFFSF 2939          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A6V1NN28_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NN28_HETAK)

HSP 1 Score: 125 bits (314), Expect = 8.890e-27
Identity = 124/541 (22.92%), Postives = 224/541 (41.40%), Query Frame = 1
Query:   13 LTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKL----FIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPM---GSWLSSLRPTTTGTGDEMHFGFTCALWILVA-YRTAIIALDVRRTGLKAYTVQFWNLMD------VLNVAIFWVQFVL--AGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFIIL 1587
            + VF+  +++ +D  Q +    S+ ++ +         F D+    +W+ + +++ +PT+Y  T YNG   P  +      +        +G+ R+RQ+R++                               AA+  T     E      +G  S      E+   W    R            G    ++  L     A +      SP +L+                       Y   GYV  LP     A   L++L    ++D +TR VFV+ T YN N       ++A E+ A G+++ S ++   P+      L+    +  G    +   F   L+ LVA + T  +   V      +Y    WNLMD      V  + +F   +++  A   +     L+DD    D FV +    L+    +  +A   ++     F+++     L QF+DT+ R+   M+ +C I+G +  G+A++F + FGHAVA +++F E++  L  ++LG+ ++D LRAV PI+G  LFVS++++
Sbjct:    1 MAVFVLIIFLPQDIDQGYQTQLSIRRQLLETELTRDIFFEDITLVDEWYKFMKDIYVPTIYRRTYYNGQSYPRNKAAWYQPYFVNEANLVLGITRIRQVRLR-------------------------------AASTCTVVSFLEDRFNECLGDYS---ADDEDTARWTFGAR------------GLNYKSADKLDDGTSAWQ------SPLTLAW----------------------YDAGGYVVDLPWKAKHALDELESLQANGFIDQRTRAVFVDFTAYNPNNDHLFYGRLALEMLATGKVLASAHLDAGPVYRDNRALAFAPGSNKGALGALLLEF--GLYALVALHLTRWVRKIVDFGSFLSYLRVPWNLMDMGMAFCVFALVVFRCTYMIRMANFQYDVADDLDDDELDYDSFVPLRVSMLMYRLSRNFLALAVLLAFLKAFKFLGVTKRLAQFADTVFRAYKSMLTLCFILGTICAGYAIAFHMAFGHAVARFQNFTESLLALLLSILGDFDLDELRAVNPILGVLLFVSYVLI 465          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A8J1TUZ7_OWEFU (Ofus.G06243 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TUZ7_OWEFU)

HSP 1 Score: 118 bits (296), Expect = 3.160e-24
Identity = 114/486 (23.46%), Postives = 199/486 (40.95%), Query Frame = 1
Query:  157 WSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTAIIALDVRRTGLKAYTVQFWNLMDVLN-------VAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFL---FFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFII 1584
            + W     LP LY    YNG+     +  ++     FRVG+ RLRQ+RV+P  C+     +D +  C   Y+  DE+  D+     T     EL     IG  S +  +   R A   +                    ++  TG++G                                      Y G GYV  L  +   A T++  +    ++D+ TR VF+ELT+YN NV  F+  +   E  A G  +P+  I+++ +   + S   +T     E+ +       I + Y T ++   +R+ G ++Y  Q WNL+D+         V +F  + +   +V   MR + D+ D    F  +      S Y+++  A  G+I   +   F   + F+P +   + T+   + D+    V + I+   FA    + F      + SF  ++  L+S +LG ++ D L+    IIGP  F+S+++
Sbjct: 1351 YQWLELTALPALYAGANYNGDAPSVREHKYLDDHENFRVGVPRLRQVRVKPALCSPATEAKDIMIECNKEYSYTDEENKDFFPGWFT-----ELTSNGTIGP-SPIDAAYTYRDATDLK--------------------AVPYTGAMGT-------------------------------------YGGGGYVQELGRSIRNAITIVRKIKQHDWIDYYTRAVFLELTIYNPNVNLFAFVEYCVEFPATGSTLPAPRITSFMIYEGIDS--NSTLVLIAELVYA------IYLIYITVVMVKQIRKQG-RSYFKQLWNLIDIFGLTTSYMAVCMFIGRMIYVRLV---MREIADNKDKSVSFSEL------SLYDELFTALVGIIAFVVNIKFLRLLRFNPHIALLNMTMRCCAKDLAGFSVTLVIIFMAFASMGNIAFAAGSYGFSSFGRSVVMLYSMMLGKIDFDELKDSHKIIGPCFFISYMV 1755          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A8J1TT91_OWEFU (Ofus.G062936 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TT91_OWEFU)

HSP 1 Score: 117 bits (292), Expect = 7.500e-24
Identity = 130/548 (23.72%), Postives = 219/548 (39.96%), Query Frame = 1
Query:    1 YLLFLTV--FLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHL----PSRHLLPLKTRQ-------TLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGD-EMHFGFTCALWILVAYRTAIIALDVRRTGLKAYTVQFWNL-------MDVLNVAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFI 1581
            Y LF+ V  FL Y    R S       ++L Q FV     +  +   +  P  +W+W R  LLP L+PE  YN   L   ++L IA     RVG+ARLRQLRV+  +C + + F   +  C   Y   D+D                     Y     K  VS +E     +R  V             + G        +    +L     P     +L  L       P  +   LK R        T+Y G GYV+ L      +  V+D L +  ++D  TR +FVE T+YN N+  F +  +  E    G  +    +  + + S++        G G   + F     L+ L  ++  I  L  ++ G K Y  +FWNL       M ++ VA++ ++ ++  +  + +++       RD +VN   + +  E    ++          F + + F+  +    DT+  +  D+ M  ++  I    F +   ++FG  +  Y +F     +LF+  LG+ +   + A  P IGP  F  ++
Sbjct:  397 YALFIMVLFFLSYQAKSRASYN---FAETLKQNFV----DTSNSVHGITRPDQFWAWTRQTLLPGLFPEPHYNDRSLNWREQLTIADRETVRVGMARLRQLRVKDDSCKIMKEFTKVINHCRDSYGWTDDDTKP------------------YFPMWKKTFVSTKEEVKRRSRREVHCAG---------IPGMEHKPRKKLPQWNQLQNYTGPPLNETYLEWLSEQEDPGPWIYQSALKLRSAPYMGTLTMYKGGGYVSNLGLTLERSKQVIDKLESDEWVDPNTRALFVEFTVYNANINLFGSLILLVEFMNTGAAIARTEVKVFRLYSYVG-------GWGIIVVIFEVLFVLFTLYFFQHNIRLL--KKQGRK-YLSEFWNLLEFGQIVMSIVAVAMYAMKTLMGSLAMSALKKS----GARD-YVNFVTIAMWDETYGFVVGVIVFCATLKFIKMLKFNKNMGLLGDTVVYAVKDLKMFSIMFFIYFMAFCLPAYILFGMHMQSYGTFIGVFESLFAMALGSFDFYEMEAAQPFIGPIFFFLYV 895          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A0L0DRG2_THETB (Polycystic kidney disease 2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DRG2_THETB)

HSP 1 Score: 114 bits (284), Expect = 5.640e-23
Identity = 81/301 (26.91%), Postives = 137/301 (45.51%), Query Frame = 1
Query:  688 LPLKTRQTLYPGSGYVTLLPDNYTGA--ATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTAIIALDVRRTGLKAYTVQFWNLMDVLNVAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFII 1584
            +P   R  L+ G GYV   P +      A  +  L N T++D QTR +F++ T YN NV  F   Q+  E   +G + PS       +  + + +  T       + F     L I+V         ++  TG   Y    WN++D +N+ +F   F +   + A   ++  D      F N   + L++  E  I+A N  I  F  ++Y  F P +   SDT+ RS  + +    ++  V+ GFA + +L FG  V D+RSF +   TL   +LG+ + + ++    + GP  F+ F++
Sbjct:  205 VPQLARLQLFEGGGYVEYFPASLQQDEHAQHMRDLENGTFVDLQTRALFIDFTTYNTNVNLFHVAQLTFEFLPSGGVFPSATFRVMRLYKYNNDVSGT-------IQFVLEMILIIMVLGYFVEEVWELYDTGCWEYWHNLWNVIDWINLLLFLAAFCVRIALVATFEKMNLDPRATTRFYNFQTLVLLNSAENNILASNAFILWFKVYKYTKFFPPMRTVSDTIARSIQNTIGFVAVVMFVLFGFAQAGVLAFGSDVEDFRSFIDTFYTLLRLLLGDFDFETMQYSNRVFGPLYFLFFMV 498          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A6P8H7Y8_ACTTE (uncharacterized protein LOC116289756 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H7Y8_ACTTE)

HSP 1 Score: 114 bits (284), Expect = 1.090e-22
Identity = 130/556 (23.38%), Postives = 221/556 (39.75%), Query Frame = 1
Query:    1 YLLFLTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSD----WAAAN--ATWAPKRELDMT---NYIGSQSKVRVSGEERTAWVTRHRVGVVSFLIS--------------QRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTAIIALDVRRTGLKAYTVQFWNLMDVLNVAIFWVQFVLAGVVWAGMRRLEDDF----DHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFL---FFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSF 1578
            Y +FL V L   Y  RD +  + +  SL+Q+FV    +             +W WAR  L+P LYP   YN     D+   FI     + VG++RLRQ RV+  TC +   F+     C   Y+V   D  D    W   N   T A ++   +    +++   SK+   G+       R R  V    +S               +  F+L +++L  GSI +       H+P  L  F             P   +   Y G G+   L  +Y+ A TV+  + +  +L  QTR VFVE T+YN N   F    +  E    G   PS   S   + S++             M       L  +  +    + L V++   K Y   FWN ++   VA+  ++FV+  + +A M   + +F    ++   FV+    +  S  +  +    G++   +   F + + F+  +     T+G  +  + +  +   I+   +     LVFG    +Y++      T    +LG+ +   +    PI+GP  F ++
Sbjct: 2444 YFIFLGVLLLVAYGNRDPNA-YLLRKSLMQQFVDFTDEENVGLGSAGDADSFWHWARETLIPGLYPGPLYNNKS--DKYTGFITDRNNYLVGISRLRQERVKKDTCTIAPVFRHEFPTCLGGYSVTAADTGDYDVGWKYLNKSTTSASRKRRSLEEQFSFVRENSKMVKYGDSSKV-KPRMRRAVEPVYVSTSGRQQRRRVKSGESKVYFVLDSAILPDGSIMSCPARWMYHNPIELRGF-------------PYWGKLYFYGGGGFPADLGYDYSTALTVVADVNSHNWLTDQTRAVFVEFTVYNANTNLFGVAFLFMEFLPNGGAFPSAAFSISRLYSYVGPFAKLILAMEVLM-------LLFMFYFMYREVKLMVKQK--KQYFHGFWNWLE---VALIVLEFVMVILFFARMWETDKNFIKLHENPKDFVSF---QYASASDMTLTYVIGILVFLVTLRFLKLLRFNKKMAFIGTTIGFIAKPIGLFMISFSIIFFAYGSFAHLVFGPINDNYKNLLSTGVTQMRILLGDFDYYDIEXSDPILGPIYFFTY 2967          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A835Z1J4_9STRA (Polycystin cation channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.750e-22
Identity = 133/525 (25.33%), Postives = 198/525 (37.71%), Query Frame = 1
Query:  127 FMDVATPADWWSWARNVLLPTLYPETAYNGNPLP---DEQKLFIAGG--GAFRVGLARLRQLRVQPLTC-AVPERFQ-DSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLR--PTTTGTGDEMHFGFTCALWILVAYRTAIIALDVRRTGLKAYTVQF----WNLMDVLNVAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTF----HPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFN---------------------EAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFIIL 1587
            + D+  P D ++W   V LP L        +PLP   D Q     GG  G+ RVG+ RLR +RV+  TC A+P   Q      CY P T   E    +        P R     N  GS              V  HR G                                                               YPGSGYV  LP N T A  ++D L+   +LD   R++ VE + ++ +V  F       E   +G  V +  +    +     +L        T D +      AL+ +V    A+   DV R G       F    + ++DVLN A F    VL       M  + D    R+ FV + P    +     + AFN V+      + + F    +  L QF+ TL  ++  +  + VIIG+V+C +AV F L FG   A+Y +F                      E++ TLF ++LG++E+D  R V  ++GP LF +++I+
Sbjct:    5 YFDIGGPGDVFNWLNGVFLPQLL-------SPLPNATDGQVSDRVGGDGGSLRVGVPRLRLVRVRSGTCRALPTVVQLPEDADCYGPITSASEAHEPFLGI-----PWRSASELNNGGS--------------VRSHRTGF-------------------------------------------------------------RYPGSGYVVDLPTNATAATAIVDGLFRGRFLDTSARLLAVEFSAFSASVNTFVVATALVEFMPSGAAVATVNLKAAALMRARMALAGGDRAASTLDAVMVALEMALYGIVV---ALAGRDVVRAGRVGIASFFAAAPFRVVDVLNYAFFIGVIVLRCQSVLKMDAVLDKVALRNEFVPLLPAARAALAVDGLNAFNAVLCTVRLLDMLRFVLTSNRKLAQFTATLVAAAVKLSSLMVIIGVVLCAYAVGFNLGFGANRAEYVTFGHIEAWDACVQEVVQLVAVDAQESLLTLFKSLLGDMEVDSFRDVNRVLGPILFTTYVII 439          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0A7M7NY66_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NY66_STRPU)

HSP 1 Score: 108 bits (271), Expect = 4.030e-21
Identity = 111/538 (20.63%), Postives = 203/538 (37.73%), Query Frame = 1
Query:    1 YLLFLTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSD----WAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTAIIALDVRRTGLKAYTVQFWNLMDVLNVAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVN---MFPVRLVSEYEQVIMAFNGVITLF---LFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFII 1584
            Y+++L V L   Y   D S  + + +      V  P  S  +F  + + A +W++  + L+P +YP+T YNG+P P E   F+    AF +G   LRQ RV+   C V  +F + +  C   Y+  + D  D    W   N     + + + T +   +S                                                                          P+  RQ +Y G GY+  L  +      +LD L+   + D  TR VF+E+  +N  V  F    + AE    G +   Y I    + ++ +          + +  GF       + +       ++RRTG+K Y   FWN+ + + +A      + A VV+   + + D+               ++ V+ + +++    GV+       F + + F+  +   S T+G  + D+    ++ GI    +A++F  ++  ++ D+  F   + TL + +LG    D       I+GP  F  F+I
Sbjct: 1198 YVVYLWVVLVISYGNSDPSA-YRMQEDFFNELVIGP-DSVHSFNKINSHASYWAYLHSTLVPAIYPQTWYNGDPSP-ELDGFLKNQNAFILGYPVLRQARVKMGECEVVSQFTNIVPECNVAYSFGNSDEGDYGPGWTLYNTNVTDRPQYNFTAWDEIES-------------------------------------------------------------------------YPVLGRQAVYAGGGYLAKLQGSKVEVEALLDQLFEEAWFDRYTRGVFLEIAFFNAQVNLFGVIDLVAEFLPTGGVETFYRIDIIRLFTYSNGFGAVRLAC-EILFLGF-------IVFFIVREINNMRRTGVKKYFKDFWNMAEWIIIACA----IGATVVYFYRKYVTDNLLEEFKAAGGTQRINLQYVAYWNELLTYLLGVVVFIGTLKFIKLLRFNKRIGILSTTIGSCTKDLFHFGIMFGIFFLAYALAFYKMYARSLYDFSDFIFTLETLSAAMLGKFSYDGFVQNNRILGPIFFFFFMI 1647          
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Match: A0FEM4_STRPU (Receptor for egg jelly 6 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0FEM4_STRPU)

HSP 1 Score: 106 bits (264), Expect = 3.360e-20
Identity = 117/539 (21.71%), Postives = 210/539 (38.96%), Query Frame = 1
Query:    1 YLLFLTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRA--------AFMDVATPADWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLRVQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTNYIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIGAKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPDNYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSAAGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTAIIALDVR-RTGLKAYTVQFWN---LMDVLNVAIFWVQFVLAGVVWAGMRRLEDDFDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTFHPGLNQFSDTLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFSTVLGNLEIDPLRAVAPIIGPFLFVSFI 1581
            Y LFL V L   Y+ RD  Q F +++++   FVR                 +  +TP ++W++    L+P LY    YNG  +      F+    ++RVG ARLRQLRV+PL C V  R ++++  C   Y+  +ED   +AA         + ++ NY   +       +E   W  R++  V  + +                                                 P ++   +Y G G+V         A      L +  + D  TR +F+E T+YN NV  FS   +  E    G  VPS+ + T+ +  +   L            F    A+++L      I  L    R  LK + +       L  +L  A+F ++ +        +++ ++       +VN   +    +    ++A    +++  F   + F   +   +  L R+S DM+    +  I++  FA+    VF  +V  + +F   + +L   ++G+ +   L +V  +IGP  F  +I
Sbjct: 2938 YALFLMVVLYLAYINRDP-QAFLMSETIRNTFVRDSIDYLVDGVEPVTFGALSQSTPDEFWNYIEQTLIPGLYGYKYYNGEQMHWRDTRFLRDWQSYRVGPARLRQLRVKPLPCEVNGRMENAVQDCTLDYSWSNEDEGVFAADWTYTCDPGDENIPNYAFYEV------DETRPW--RYQTAVDLYGV-------------------------------------------------PYQSNLFIYGGGGFVAEFGLEREQAMNTSRYLRDHGWYDKYTRAIFIEFTVYNANVNLFSVVTLLVETPTFGGGVPSHLVHTFRLYQYSGGLLIVAVA------FQGIFAVYLLYFLGHFIYRLKKEGRKELKNFWMILEGSMLLFGILAAAMFIMRQIFIYFTLQEVKKKDEGG-----YVNFNHIAKWDQIFGYLLATLTFLSILRFMRALRFSARVTHVAFALQRASKDMLYFLFMWCIIVIAFALWGYAVFSRSVFTFHTFQAVLESLLGMMIGSFDFYALSSVEAVIGPIFFTLYI 3407          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7002.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPR6_9STRA8.850e-8532.41Polycystin cation channel-domain-containing protei... [more]
A0A2B4SV82_STYPI4.180e-3026.24Polycystic kidney disease and receptor for egg jel... [more]
A0A6V1NN28_HETAK8.890e-2722.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J1TUZ7_OWEFU3.160e-2423.46Ofus.G06243 protein (Fragment) n=1 Tax=Owenia fusi... [more]
A0A8J1TT91_OWEFU7.500e-2423.72Ofus.G062936 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A0L0DRG2_THETB5.640e-2326.91Polycystic kidney disease 2 n=1 Tax=Thecamonas tra... [more]
A0A6P8H7Y8_ACTTE1.090e-2223.38uncharacterized protein LOC116289756 n=1 Tax=Actin... [more]
A0A835Z1J4_9STRA1.750e-2225.33Polycystin cation channel-domain-containing protei... [more]
A0A7M7NY66_STRPU4.030e-2120.63Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
A0FEM4_STRPU3.360e-2021.71Receptor for egg jelly 6 n=1 Tax=Strongylocentrotu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7002contigP-wetherbeei_contig7002:783..3232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog6412.HelroP84784
Preferred namePKD2
PFAMsPKD_channel
Model size1587
Max annot lvl33208|Metazoa
KEGG koko:K04986,ko:K04990
KEGG TC1.A.5.1.3,1.A.5.2.1,1.A.5.2.2,1.A.5.2.4
KEGG Pathwayko04742,map04742
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000079,GO:0000226,GO:0000302,GO:0001101,GO:0001505,GO:0001568,GO:0001581,GO:0001655,GO:0001656,GO:0001657,GO:0001658,GO:0001701,GO:0001763,GO:0001822,GO:0001823,GO:0001889,GO:0001890,GO:0001892,GO:0001932,GO:0001934,GO:0001944,GO:0001945,GO:0001946,GO:0001947,GO:0002009,GO:0002133,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003127,GO:0003143,GO:0003146,GO:0003170,GO:0003171,GO:0003338,GO:0003674,GO:0005102,GO:0005215,GO:0005216,GO:0005217,GO:0005227,GO:0005244,GO:0005245,GO:0005248,GO:0005249,GO:0005261,GO:0005262,GO:0005267,GO:0005272,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005815,GO:0005819,GO:0005856,GO:0005886,GO:0005887,GO:0005929,GO:0005938,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006928,GO:0006936,GO:0006937,GO:0006939,GO:0006942,GO:0006950,GO:0006970,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007204,GO:0007224,GO:0007259,GO:0007275,GO:0007276,GO:0007283,GO:0007320,GO:0007346,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007507,GO:0007600,GO:0007606,GO:0007610,GO:0007617,GO:0007618,GO:0007620,GO:0007631,GO:0008016,GO:0008092,GO:0008104,GO:0008150,GO:0008285,GO:0008324,GO:0009268,GO:0009415,GO:0009581,GO:0009582,GO:0009593,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009719,GO:0009726,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009925,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010447,GO:0010468,GO:0010522,GO:0010523,GO:0010524,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010712,GO:0010882,GO:0010948,GO:0010959,GO:0012505,GO:0014070,GO:0014074,GO:0015075,GO:0015077,GO:0015079,GO:0015081,GO:0015085,GO:0015267,GO:0015269,GO:0015271,GO:0015276,GO:0015278,GO:0015318,GO:0015630,GO:0015672,GO:0016020,GO:0016021,GO:0016043,GO:0016323,GO:0016328,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019722,GO:0019725,GO:0019899,GO:0019904,GO:0019932,GO:0019953,GO:0021510,GO:0021915,GO:0022402,GO:0022414,GO:0022607,GO:0022803,GO:0022832,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0022898,GO:0023041,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030003,GO:0030027,GO:0030176,GO:0030317,GO:0030424,GO:0030425,GO:0030536,GO:0030537,GO:0031023,GO:0031090,GO:0031224,GO:0031226,GO:0031227,GO:0031252,GO:0031253,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031514,GO:0031585,GO:0031587,GO:0031657,GO:0031659,GO:0031984,GO:0032268,GO:0032270,GO:0032409,GO:0032410,GO:0032411,GO:0032412,GO:0032413,GO:0032414,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032965,GO:0032991,GO:0033036,GO:0033554,GO:0033674,GO:0034220,GO:0034405,GO:0034599,GO:0034606,GO:0034608,GO:0034614,GO:0034702,GO:0034703,GO:0034704,GO:0034762,GO:0034763,GO:0034764,GO:0034765,GO:0034766,GO:0034767,GO:0035050,GO:0035239,GO:0035295,GO:0035502,GO:0035556,GO:0035725,GO:0035904,GO:0036064,GO:0036303,GO:0036477,GO:0040011,GO:0042127,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042592,GO:0042802,GO:0042803,GO:0042805,GO:0042994,GO:0042995,GO:0043005,GO:0043009,GO:0043025,GO:0043085,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043235,GO:0043269,GO:0043270,GO:0043271,GO:0043398,GO:0043433,GO:0043549,GO:0043933,GO:0044057,GO:0044085,GO:0044092,GO:0044093,GO:0044297,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044441,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0045178,GO:0045180,GO:0045185,GO:0045428,GO:0045429,GO:0045737,GO:0045786,GO:0045787,GO:0045859,GO:0045860,GO:0045893,GO:0045930,GO:0045935,GO:0045937,GO:0045944,GO:0046683,GO:0046692,GO:0046693,GO:0046872,GO:0046873,GO:0046983,GO:0048232,GO:0048471,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048732,GO:0048745,GO:0048754,GO:0048763,GO:0048793,GO:0048844,GO:0048856,GO:0048870,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050848,GO:0050849,GO:0050850,GO:0050877,GO:0050896,GO:0050906,GO:0050907,GO:0050909,GO:0050912,GO:0050915,GO:0050982,GO:0051049,GO:0051050,GO:0051051,GO:0051090,GO:0051117,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051209,GO:0051219,GO:0051220,GO:0051234,GO:0051235,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051279,GO:0051280,GO:0051281,GO:0051282,GO:0051283,GO:0051284,GO:0051289,GO:0051298,GO:0051338,GO:0051347,GO:0051371,GO:0051393,GO:0051480,GO:0051591,GO:0051592,GO:0051599,GO:0051606,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051924,GO:0051926,GO:0051928,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0055117,GO:0060170,GO:0060179,GO:0060255,GO:0060314,GO:0060315,GO:0060341,GO:0060401,GO:0060402,GO:0060429,GO:0060485,GO:0060537,GO:0060562,GO:0060674,GO:0060675,GO:0060840,GO:0060993,GO:0061008,GO:0061138,GO:0061326,GO:0061333,GO:0061371,GO:0061437,GO:0061438,GO:0061439,GO:0061440,GO:0061441,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070121,GO:0070206,GO:0070207,GO:0070588,GO:0070838,GO:0070887,GO:0071156,GO:0071158,GO:0071214,GO:0071229,GO:0071241,GO:0071248,GO:0071277,GO:0071310,GO:0071320,GO:0071407,GO:0071417,GO:0071458,GO:0071462,GO:0071464,GO:0071467,GO:0071468,GO:0071470,GO:0071495,GO:0071498,GO:0071556,GO:0071683,GO:0071804,GO:0071805,GO:0071840,GO:0071900,GO:0071902,GO:0071910,GO:0071944,GO:0072001,GO:0072006,GO:0072009,GO:0072014,GO:0072017,GO:0072019,GO:0072021,GO:0072028,GO:0072050,GO:0072055,GO:0072059,GO:0072070,GO:0072073,GO:0072074,GO:0072075,GO:0072078,GO:0072080,GO:0072088,GO:0072114,GO:0072163,GO:0072164,GO:0072170,GO:0072171,GO:0072176,GO:0072177,GO:0072194,GO:0072207,GO:0072208,GO:0072210,GO:0072214,GO:0072218,GO:0072219,GO:0072234,GO:0072235,GO:0072236,GO:0072243,GO:0072273,GO:0072284,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072686,GO:0080090,GO:0090068,GO:0090257,GO:0090279,GO:0097447,GO:0097458,GO:0097553,GO:0097696,GO:0097702,GO:0097704,GO:0097722,GO:0097730,GO:0098552,GO:0098553,GO:0098554,GO:0098562,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098827,GO:0099094,GO:0099568,GO:0099604,GO:0099738,GO:0104004,GO:0120025,GO:0120038,GO:1901019,GO:1901020,GO:1901021,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902495,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902806,GO:1902807,GO:1903169,GO:1903170,GO:1903426,GO:1903428,GO:1903506,GO:1903508,GO:1903522,GO:1904029,GO:1904031,GO:1904062,GO:1904063,GO:1904064,GO:1904407,GO:1904427,GO:1990351,GO:2000045,GO:2000112,GO:2000134,GO:2000377,GO:2000379,GO:2001141,GO:2001257,GO:2001258,GO:2001259
Exons4
Evalue5.11e-33
EggNOG OGsKOG3599@1|root,KOG3599@2759|Eukaryota,38E7E@33154|Opisthokonta,3BG4C@33208|Metazoa,3CUR7@33213|Bilateria
Descriptionmetanephric cortical collecting duct development
Cds size1587
COG categoryPT
BRITEko00000,ko00001,ko03036,ko04040
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186951.6028285-CDS-P-wetherbeei_contig7002:782..13781683186951.6028285-CDS-P-wetherbeei_contig7002:782..1378Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7002 783..1378 +
1683186951.62085-CDS-P-wetherbeei_contig7002:1630..22991683186951.62085-CDS-P-wetherbeei_contig7002:1630..2299Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7002 1631..2299 +
1683186951.6312878-CDS-P-wetherbeei_contig7002:2473..25821683186951.6312878-CDS-P-wetherbeei_contig7002:2473..2582Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7002 2474..2582 +
1683186951.6415954-CDS-P-wetherbeei_contig7002:3019..32321683186951.6415954-CDS-P-wetherbeei_contig7002:3019..3232Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7002 3020..3232 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7002.1.4prot_P-wetherbeei_contig7002.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7002 783..3232 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7002.1.4

>prot_P-wetherbeei_contig7002.1.4 ID=prot_P-wetherbeei_contig7002.1.4|Name=mRNA_P-wetherbeei_contig7002.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=529bp
YLLFLTVFLCYVYVGRDSSQPFWVNDSLVQRFVRAPFQSRAAFMDVATPA
DWWSWARNVLLPTLYPETAYNGNPLPDEQKLFIAGGGAFRVGLARLRQLR
VQPLTCAVPERFQDSLTRCYAPYTVDDEDRSDWAAANATWAPKRELDMTN
YIGSQSKVRVSGEERTAWVTRHRVGVVSFLISQRFGFLLGASLLLTGSIG
AKERLCPIHSPASLSCFLARLIHLPSRHLLPLKTRQTLYPGSGYVTLLPD
NYTGAATVLDALYNATYLDFQTRVVFVELTLYNQNVAQFSTCQIAAEVSA
AGRIVPSYYISTYPMGSWLSSLRPTTTGTGDEMHFGFTCALWILVAYRTA
IIALDVRRTGLKAYTVQFWNLMDVLNVAIFWVQFVLAGVVWAGMRRLEDD
FDHRDVFVNMFPVRLVSEYEQVIMAFNGVITLFLFFEYVTFHPGLNQFSD
TLGRSSSDMMMICVIIGIVICGFAVSFMLVFGHAVADYRSFNEAMATLFS
TVLGNLEIDPLRAVAPIIGPFLFVSFIIL
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mRNA from alignment at P-wetherbeei_contig7002:783..3232+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7002.1.4 ID=mRNA_P-wetherbeei_contig7002.1.4|Name=mRNA_P-wetherbeei_contig7002.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2450bp|location=Sequence derived from alignment at P-wetherbeei_contig7002:783..3232+ (Phaeothamnion wetherbeei SAG_119_79)
TACCTGCTCTTCCTGACGGTGTTTCTGTGCTACGTGTACGTCGGGCGGGA CAGCAGCCAGCCGTTCTGGGTAAACGACTCGCTCGTACAGCGCTTCGTCC GAGCGCCCTTCCAGTCGCGCGCCGCCTTTATGGACGTCGCCACTCCAGCC GACTGGTGGAGCTGGGCCCGCAACGTCCTGCTGCCGACGCTCTACCCCGA AACCGCCTACAACGGCAACCCGCTGCCGGACGAGCAGAAGCTCTTCATCG CCGGCGGCGGTGCCTTCCGCGTCGGGCTGGCCCGGCTGCGGCAGCTCCGG GTCCAGCCGTTGACCTGCGCGGTGCCGGAGCGGTTCCAGGACTCGCTGAC GCGCTGCTACGCGCCGTACACGGTGGACGACGAGGACCGGTCGGACTGGG CGGCGGCGAACGCGACGTGGGCGCCGAAGCGGGAGCTCGATATGACCAAC TACATTGGCAGCCAGAGCAAGGTGAGAGTGAGTGGGGAGGAGAGAACGGC TTGGGTCACACGTCACAGGGTGGGGGTTGTCTCTTTCTTGATTTCGCAAC GGTTCGGCTTTCTCCTGGGCGCTTCCTTATTGTTGACGGGCTCGATGTGT TTCTTTCGCCCCTAGAAGAAGCCAAGCGAGTCCCGCGGCAGCGGGAAGAA GCGGGGGCCGGGTGCTGCCGATCTTCCCTTTTTCTCTTCACCACGTGATT CCGCTAGTATCAGCTTGCACTTAGCGGATCCGCCACCTAATTTACTTCTT TCAGCTCAACTTGACAACGCTTCAGGCATAGACTCTGCTTTTTTGGCGTT ACGACAAAGATCCATGGATTCTGTGCAGAGGAGGACGGGCAACTGAAGAG GAGCCAAGGAACGTCTCTGCCCGATTCACTCACCGGCTTCTCTTTCCTGT TTTCTTGCCCGCCTGATCCATCTCCCTTCTCGACACCTCCTTCCTCTGAA AACCCGACAGACGCTGTACCCGGGCAGCGGCTACGTGACGCTCCTGCCGG ACAACTACACGGGTGCCGCCACCGTGCTCGACGCCCTCTACAACGCAACC TACCTCGACTTTCAGACCCGCGTCGTGTTTGTCGAGCTCACGCTGTACAA CCAGAACGTGGCGCAGTTTAGCACCTGCCAGATCGCCGCCGAGGTGTCGG CTGCCGGCCGCATCGTGCCGTCCTACTACATTTCGACGTACCCGATGGGG TCATGGCTGTCGTCGCTGCGGCCGACGACGACCGGCACAGGTGACGAAAT GCACTTCGGCTTCACTTGCGCGCTCTGGATCCTGGTGGCATACCGGACGG CGATCATCGCGCTGGACGTGAGAAGGACGGGTCTCAAGGCCTACACGGTC CAGTTCTGGAATCTGATGGACGTATTGAACGTTGCCATCTTCTGGGTGCA GTTCGTGCTGGCCGGCGTGGTATGGGCGGGCATGCGACGGCTGGAGGACG ACTTCGACCACCGCGACGTCTTTGTCAACATGTTTCCCGTCCGTCTCGTG TCCGAGTACGAGCAGGTGTGAGAAAGAGCATTTTTTCCTCTTCTGAAAAG TGGCAAGAGTCTTCTCAAGAAGCTTGAGGATAGCTTTGCTGAAGAATGGT CTGTCCTCCGTTCTGAAGTACAACATTCCTTACTTCATGCCTCCCGCTGT GGCTTCGCTTTGTGGTCCTTCTTCCTTTCCTCTCGGCAGAGTATAATGGC GTTCAATGGGGTCATCACCCTCTTCCTCTTCTTCGAGTACGTCACCTTTC ACCCCGGACTCAACCAGTTTTCGGACACCCTCGGCAGGAGCTCCAGCGAT GTGCGTGAAGCGGCTCTTTTCCTTCTGCTTTCCTTCTTTACTTTTTTGTG AACGCCTGAGTCAGTGTTGGTTGATGCAGTTTTGCCTCCCGCCTTGGTGA CGACCATGCAAGCAAATTGCAGGTGGCAGCCGCCTTCTTTCCGCTGAGGG ATACGGACCCGGTGCCGTTCGTGTGAGCCAGGGGAGCTTTCACGAACTGC TGCAAGCGGGTGATGCGTACCTGCCCTGCCCCCTTGGAATTCGGTGGCCA TTCCTTCTCCTCGCAACGAACCGGCTGCGGCCGGCCCGATGCCGCACGTG CTGCCCTCGCTTGTGGTCGATGCTGCCGCCTGCTGCATCCTCACTGCCTC CTTCCTCTTCCTCGTCTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTCTC CGCACAATCCCTCCCAACCGCCCCTCACCACAACCAGATGATGATGATCT GCGTCATCATTGGCATTGTCATCTGCGGCTTCGCCGTCTCCTTTATGCTC GTCTTCGGCCACGCCGTCGCCGACTACCGCTCCTTCAACGAGGCCATGGC CACCCTCTTCTCCACCGTCCTCGGCAACCTCGAGATCGACCCGCTGCGGG CCGTCGCGCCCATCATCGGGCCTTTCCTCTTCGTCTCTTTCATTATTCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7002:783..3232+

>mRNA_P-wetherbeei_contig7002.1.4 ID=mRNA_P-wetherbeei_contig7002.1.4|Name=mRNA_P-wetherbeei_contig7002.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1587bp|location=Sequence derived from alignment at P-wetherbeei_contig7002:783..3232+ (Phaeothamnion wetherbeei SAG_119_79)
TACCTGCTCTTCCTGACGGTGTTTCTGTGCTACGTGTACGTCGGGCGGGA
CAGCAGCCAGCCGTTCTGGGTAAACGACTCGCTCGTACAGCGCTTCGTCC
GAGCGCCCTTCCAGTCGCGCGCCGCCTTTATGGACGTCGCCACTCCAGCC
GACTGGTGGAGCTGGGCCCGCAACGTCCTGCTGCCGACGCTCTACCCCGA
AACCGCCTACAACGGCAACCCGCTGCCGGACGAGCAGAAGCTCTTCATCG
CCGGCGGCGGTGCCTTCCGCGTCGGGCTGGCCCGGCTGCGGCAGCTCCGG
GTCCAGCCGTTGACCTGCGCGGTGCCGGAGCGGTTCCAGGACTCGCTGAC
GCGCTGCTACGCGCCGTACACGGTGGACGACGAGGACCGGTCGGACTGGG
CGGCGGCGAACGCGACGTGGGCGCCGAAGCGGGAGCTCGATATGACCAAC
TACATTGGCAGCCAGAGCAAGGTGAGAGTGAGTGGGGAGGAGAGAACGGC
TTGGGTCACACGTCACAGGGTGGGGGTTGTCTCTTTCTTGATTTCGCAAC
GGTTCGGCTTTCTCCTGGGCGCTTCCTTATTGTTGACGGGCTCGATAGGA
GCCAAGGAACGTCTCTGCCCGATTCACTCACCGGCTTCTCTTTCCTGTTT
TCTTGCCCGCCTGATCCATCTCCCTTCTCGACACCTCCTTCCTCTGAAAA
CCCGACAGACGCTGTACCCGGGCAGCGGCTACGTGACGCTCCTGCCGGAC
AACTACACGGGTGCCGCCACCGTGCTCGACGCCCTCTACAACGCAACCTA
CCTCGACTTTCAGACCCGCGTCGTGTTTGTCGAGCTCACGCTGTACAACC
AGAACGTGGCGCAGTTTAGCACCTGCCAGATCGCCGCCGAGGTGTCGGCT
GCCGGCCGCATCGTGCCGTCCTACTACATTTCGACGTACCCGATGGGGTC
ATGGCTGTCGTCGCTGCGGCCGACGACGACCGGCACAGGTGACGAAATGC
ACTTCGGCTTCACTTGCGCGCTCTGGATCCTGGTGGCATACCGGACGGCG
ATCATCGCGCTGGACGTGAGAAGGACGGGTCTCAAGGCCTACACGGTCCA
GTTCTGGAATCTGATGGACGTATTGAACGTTGCCATCTTCTGGGTGCAGT
TCGTGCTGGCCGGCGTGGTATGGGCGGGCATGCGACGGCTGGAGGACGAC
TTCGACCACCGCGACGTCTTTGTCAACATGTTTCCCGTCCGTCTCGTGTC
CGAGTACGAGCAGGTTATAATGGCGTTCAATGGGGTCATCACCCTCTTCC
TCTTCTTCGAGTACGTCACCTTTCACCCCGGACTCAACCAGTTTTCGGAC
ACCCTCGGCAGGAGCTCCAGCGATATGATGATGATCTGCGTCATCATTGG
CATTGTCATCTGCGGCTTCGCCGTCTCCTTTATGCTCGTCTTCGGCCACG
CCGTCGCCGACTACCGCTCCTTCAACGAGGCCATGGCCACCCTCTTCTCC
ACCGTCCTCGGCAACCTCGAGATCGACCCGCTGCGGGCCGTCGCGCCCAT
CATCGGGCCTTTCCTCTTCGTCTCTTTCATTATTCTC
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