mRNA_P-wetherbeei_contig6993.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: A0A7X8XNP4_9BURK (DNA repair protein RecN n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XNP4_9BURK) HSP 1 Score: 155 bits (392), Expect = 3.230e-41 Identity = 91/181 (50.28%), Postives = 120/181 (66.30%), Query Frame = 1
Query: 1 PNMLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGAHPNMRP--NAAQVSRVSGHF-QTTERSLAWLEEQGY-GTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTAL 531
P ML ELEI NFALVER +PF LN+L+GETG+GKS++++A+ +LLGG P +P + A+ VSG F E +LA + + G T +ELLLSR+ GRS+ RIN RL T A +RELG LV++HGQHQ LL+PS HL+ LD F GPAQA L + + + R RE+ +L AL
Sbjct: 22 PAMLAELEIINFALVERACLPFTESLNILSGETGSGKSLVVEALGFLLGGT-PRDKPLRSGAERGSVSGRFLDPPEEALALVRQWGLEDTDDELLLSRDLHASGRSTCRINSRLTTLANLRELGSTLVDLHGQHQQYALLKPSRHLQILDRFAGPAQAGLLSRHAATWKRSRELSAELEAL 201
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: A0A1E4FBE1_9BACT (DNA repair protein RecN n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4FBE1_9BACT) HSP 1 Score: 152 bits (385), Expect = 2.050e-40 Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGAHPNMRPNAAQVSRVSGHFQTTERSLAWLEEQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTALNEQSRTR 552
ML++LEIENFAL++ + + F GLNVLTGETGAGKSI+LDA+ +LLG R N + +RV+G F ++ + WL EQG+ +E + RE S GRS R+NG L + AQ+RELG ++EIH QHQS +LLRPS HL+ LD LE YR +Y +E +QL L + R R
Sbjct: 1 MLVQLEIENFALIDSVQLEFREGLNVLTGETGAGKSIVLDALGFLLGDP---ARDNLQKRARVTGRFMLSQEAKRWLVEQGWDEDDEAIALREVSPGGRSLCRLNGSLCSLAQLRELGNLMLEIHSQHQSNRLLRPSRHLELLDRLSDHQPL--LEAYRDLYRESQESARQLRELGQSERER 177
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: UPI00164BC436 (DNA repair protein RecN n=1 Tax=Anaerofilum sp. BX8 TaxID=2763016 RepID=UPI00164BC436) HSP 1 Score: 147 bits (370), Expect = 3.430e-38 Identity = 88/179 (49.16%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGG--AHPNMRPNAAQVSRVSGHFQTTERSLAWLEEQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRL-EDYRSVYARLREVEKQLTALN 534
ML EL IEN A++E+ V FG GLNVLTGETGAGKSIL+D+I+ +LG + +R + + + Q + A LE GY EELLL RE G++S R+NGR AT+A +RE+G +L+ IHGQH + LL PS HL LD G AQ L E+YR Y LRE+EKQ+ AL+
Sbjct: 1 MLNELSIENVAVIEKAEVRFGAGLNVLTGETGAGKSILIDSINAILGNRTSRELVRSGTPKAAVWATFTQLPAEAQAALEAAGYEADEELLLYREIGADGKTSCRVNGRPATAAILREIGASLLTIHGQHDNQSLLNPSKHLGILD---GYAQNEELLEEYRHAYRALREIEKQIAALS 176
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: UPI001931AA4F (DNA repair protein RecN n=1 Tax=Alkalihalobacillus gibsonii TaxID=79881 RepID=UPI001931AA4F) HSP 1 Score: 143 bits (361), Expect = 7.400e-37 Identity = 77/180 (42.78%), Postives = 114/180 (63.33%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGG-AHPNMRPNAAQVSRVSGHFQTTERSLAWLE--EQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTALNE 537
ML+EL + +FA++E L +PF GL VLTGETGAGKSI++DAI LLGG + + + G F + A L+ E G EEL+L RE + QG+S RING+L T +RE+G++LV++HGQH+ L++P HL+FLD + ++YR +Y R +++ KQ++AL+E
Sbjct: 1 MLIELSVRHFAIIEELTIPFESGLTVLTGETGAGKSIIIDAIGLLLGGRGSAEFVRHGETRAEIEGLFAVDAKHQAVLKAVELGIEANEELILRREITSQGKSICRINGKLVTLGILREIGQSLVDVHGQHEHQSLMQPDKHLRFLDQYATNKLKSTFQEYRELYERAQKINKQISALSE 180
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: A0A1Y4TMH6_9FIRM (DNA repair protein RecN n=2 Tax=Gemmiger TaxID=204475 RepID=A0A1Y4TMH6_9FIRM) HSP 1 Score: 140 bits (352), Expect = 1.230e-35 Identity = 83/177 (46.89%), Postives = 114/177 (64.41%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGG--AHPNMRPNAAQVSRVSGHFQTTERSLAWLEEQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTAL 531
ML L+IEN A++E+ F GLNVLTGETGAGKSIL+D+I+ +LG + +R AA+ + + R+ A LEE GY +ELLL RE S +G+ RING AT+A +RE+G +L+ IHGQH S L P+ HL LD F QA+ LE+Y+++Y RL V++Q+ AL
Sbjct: 1 MLSSLKIENVAVIEKAQAQFTAGLNVLTGETGAGKSILIDSINAILGNRTSRDLVRTGAAKACIWATFTDLSPRTRALLEEAGYEAEDELLLYREISAEGKGGCRINGMPATAAVLREIGGSLINIHGQHDSQSLTNPARHLALLDTFAQD-QAQ-LEEYQTLYRRLIRVKRQMDAL 175
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: A0A7C3SBX4_9BACT (DNA repair protein RecN n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3SBX4_9BACT) HSP 1 Score: 140 bits (352), Expect = 1.440e-35 Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGAHP-NMRPNAAQVSRVSGHFQTTE--RSLAWLEEQGYGTCEELL-LSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTALNEQSRTR 552
ML EL I N A+++ + VPF G NVLTGETGAGKSI++ AI++L+GG ++ A+ V G F T + A LEE G T +++L LSRE S G+S RINGR AT A ++++G++L++IHGQH+ LL P+ HL+FLD F G E Y S+Y +L +VE+++ L R R
Sbjct: 1 MLTELLIRNLAIIDEVQVPFQPGFNVLTGETGAGKSIIIHAINFLVGGKGDIDLIRAEAETMLVEGVFDLTNCPQVKAVLEEVGIETEDDMLILSRELSRAGKSRCRINGRAATVAMLKQIGKSLIDIHGQHEHQSLLDPANHLRFLDAFGGEGLMALKERYNSLYRQLMQVEREIAELQRSERER 186
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: UPI001C11EC4B (DNA repair protein RecN n=1 Tax=Acetivibrio sp. MSJd-27 TaxID=2841523 RepID=UPI001C11EC4B) HSP 1 Score: 139 bits (350), Expect = 2.500e-35 Identity = 75/176 (42.61%), Postives = 112/176 (63.64%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGG-AHPNMRPNAAQVSRVSGHFQTTERSLAWLEEQGYGTCEE--LLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLT 525
ML+ L I A+++ + + F GLN+LTGETGAGKSI++DA++ +LG N+ + + VS F E+ +L E G+ CEE L+L RE ++ G+S+ RING+LAT++ +RE+ ++LV IHGQH + L+ P HL LD FC + L DYR Y R R++EK+L+
Sbjct: 1 MLVSLTIHQIAVIQSVQIEFDKGLNILTGETGAGKSIIIDALNMILGNRVSKNLIRTGEESASVSAIFMVQEKVQDYLSENGF-PCEEGELMLYREINISGKSTIRINGKLATASILREIADSLVNIHGQHDNQSLMNPEKHLHILDEFCN--NEKELYDYRQAYHRYRQIEKELS 173
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: UPI0019457683 (AAA family ATPase n=1 Tax=Thermobrachium celere TaxID=53422 RepID=UPI0019457683) HSP 1 Score: 134 bits (336), Expect = 2.580e-35 Identity = 70/184 (38.04%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGA-HPNMRPNAAQVSRVSGHFQT-TERSLAWLEEQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTALNEQSRTR 552
MLL+L I+NFAL+E L + F G NVLTGETGAGKSIL+D++ +L+G + + + + V G F+ E+ +++L+E G + L+L+RE + +S +R+NGR + + IRE+ + L++IHGQH+ LL + H++ LD FCG ++Y+ Y +++ +EK + LN+ + R
Sbjct: 1 MLLKLRIKNFALIEELELDFSNGFNVLTGETGAGKSILIDSVSFLVGEKFNKEIIRTGSDFAFVEGIFEIKNEKIISYLKENGIEVDDYLILAREINQSNKSISRVNGRTTSVSFIREISKYLIDIHGQHEHQSLLDDAKHIEILDSFCGEKLKSLKDNYKDKYEKIKSIEKDIERLNQDEQYR 184
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: A0A553ZV70_9BACI (DNA repair protein RecN n=1 Tax=Bacillus sp. P16(2019) TaxID=2597270 RepID=A0A553ZV70_9BACI) HSP 1 Score: 138 bits (348), Expect = 5.050e-35 Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGA-------HPNMRPNAAQVSRVSGHFQTTERSLAWLEEQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTALNE 537
ML+EL I++FA+++ L VPF GL VLTGETGAGKSI++DAI LLGG H R + V + Q ++++ E G EE++L RE + QG+S RING+L T +RE+G++LV++HGQH+ L++P HL FLD F + L +Y+ ++ + + + KQ+ LNE
Sbjct: 1 MLIELSIKHFAIIDELTVPFERGLTVLTGETGAGKSIIIDAIGLLLGGRGSAEFVRHGESRAEIEGLFAVDENHQAVQKAI----ELGIQADEEMILRREITQQGKSVCRINGKLVTLGILREIGQSLVDVHGQHEHQTLMQPDKHLMFLDQFASKEISSTLTEYQELFEQAQTINKQIQDLNE 180
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Match: A0A7V9HDT5_9ACTN (DNA repair protein RecN n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9HDT5_9ACTN) HSP 1 Score: 138 bits (347), Expect = 6.210e-35 Identity = 79/184 (42.93%), Postives = 114/184 (61.96%), Query Frame = 1
Query: 7 MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGAHPN--MRPNAAQVSRVSGHFQTTERSLAWLEEQGYGTCEELLLSRECSVQGRSSARINGRLATSAQIRELGENLVEIHGQHQSTQLLRPSMHLKFLDIFCGPAQARRLEDYRSVYARLREVEKQLTALNEQSRTR 552
ML EL +EN L+ER + G GLNVLTGETGAGK++L A+D LLGG + +RP A++ V G F ++ L E+ CEE++L+R S +GR+ A + GR AT+A +R++G LV +GQH+ +L + L+ LD FCGP QA R + + Y R R +E++L AL ++ TR
Sbjct: 1 MLCELRVENLLLIERAELRLGEGLNVLTGETGAGKTVLAHALDLLLGGKPRSGIVRPGASEAY-VEGVFSLSDEMRDELAERLPSDCEEIVLARRVSAEGRTRAYLGGRSATAADLRDIGGRLVSFYGQHEHRKLTLAAAQLEILDGFCGPDQAARRARFAAAYGRQRALERELEALMARAGTR 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6993.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6993.2.1 >prot_P-wetherbeei_contig6993.2.1 ID=prot_P-wetherbeei_contig6993.2.1|Name=mRNA_P-wetherbeei_contig6993.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp MLLELEIENFALVERLHVPFGGGLNVLTGETGAGKSILLDAIDYLLGGAHback to top mRNA from alignment at P-wetherbeei_contig6993:2679..3230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6993.2.1 ID=mRNA_P-wetherbeei_contig6993.2.1|Name=mRNA_P-wetherbeei_contig6993.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig6993:2679..3230+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6993:2679..3230+ >mRNA_P-wetherbeei_contig6993.2.1 ID=mRNA_P-wetherbeei_contig6993.2.1|Name=mRNA_P-wetherbeei_contig6993.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig6993:2679..3230+ (Phaeothamnion wetherbeei SAG_119_79)back to top |