mRNA_P-wetherbeei_contig6986.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: A0A8B6DQX2_MYTGA (ATP-dependent DNA helicase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DQX2_MYTGA) HSP 1 Score: 163 bits (412), Expect = 1.020e-47 Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 1
Query: 1 TYNSADTVFDDADARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYF-DNIVYEDIL 543
TY SADTV D++ +P E LN++TP G PPH+L LK P++LLRNLN + G +GTR+ V +E I TGT AG V++PRI + +D+ LPF L+RRQ P+ A S+TINKAQGQTL + L L VF+HGQ Y AFSRV + ++++ LP +G Y+ DNIVYE ++
Sbjct: 13 TYLSADTVEDESTGYLYPTEFLNTITPSGTPPHKLTLKKHAPIMLLRNLNTAAGLLNGTRLSVLNLGTRLIETKILTGTHAGDTVFLPRITIIPSDAGLPFNLKRRQFPIRPAFSITINKAQGQTLGQIGLDLTKPVFSHGQLYAAFSRVRDFKSISI-LPAADSLFDGQYYTDNIVYEGVI 193
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: UPI001D014C45 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D014C45) HSP 1 Score: 164 bits (414), Expect = 7.630e-47 Identity = 90/187 (48.13%), Postives = 123/187 (65.78%), Query Frame = 1
Query: 1 TYNSADTVF------DDADARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDIL 543
TY S+DTV +D D +P E LNSL PG+P H +RLK+G PV+LLRN+N S G +GTR+ ++ + F+E I TGT+ G +VY+PRI ++ +DS PF L+RRQ P++V ++TINK+QGQ+L V LYL QVF HGQ YVA SRV+ L V + + + E N NIVY++IL
Sbjct: 106 TYRSSDTVCKAMSNSEDGDHL-YPTEFLNSLKCPGIPDHEIRLKVGLPVMLLRNINQSEGLCNGTRLTITQLGKWFIEAQIITGTNIGNKVYIPRIIMSPSDSKWPFVLKRRQYPISVCFAMTINKSQGQSLKHVGLYLPKQVFIHGQLYVAVSRVTSRDGLKVLISDE-ESKENNSAKNIVYKEIL 290
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: A0A2I0AB67_9ASPA (ATP-dependent DNA helicase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AB67_9ASPA) HSP 1 Score: 161 bits (407), Expect = 6.400e-46 Identity = 81/165 (49.09%), Postives = 116/165 (70.30%), Query Frame = 1
Query: 49 FPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDIL 543
+ E LNSLT PG+P H+L LK+ TP++LL+NL+ + G +GTR+IV+ +E +I TGT+ G +V +PRI +T++ SDLPF ++RRQ P+ VA ++TINK+QGQTL + L L T +F+HGQ YVA SR S +L V L N++ P G + NIVY+D+L
Sbjct: 81 YTTEFLNSLTLPGLPTHKLELKVNTPIMLLKNLDQTNGLCNGTRLIVTRIGDRVIEAEIITGTNIGEKVIIPRIILTSSKSDLPFIIKRRQYPIKVAYAMTINKSQGQTLQHIGLCLQTPIFSHGQLYVALSRASSVHSLKVLLSNNHDIPYG-FTRNIVYKDVL 244
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: A0A8I7B9Y8_HORVV (ATP-dependent DNA helicase n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I7B9Y8_HORVV) HSP 1 Score: 160 bits (406), Expect = 8.180e-45 Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 49 FPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDIL 543
+P E LNSLT G+P H LRLK+G P++L+RN+N S G +GTR+ ++ + F+E + GT+ G ++Y+PRI ++ +DS PF L+RRQ P++V ++TINK+QGQ+L V LYL QVFTHGQ YVA SRV+ L + + + R P N NIVY+DIL
Sbjct: 205 YPTEFLNSLTFSGIPDHELRLKVGLPIMLMRNINQSAGLCNGTRLTITQLGKRFIEGRVIQGTNVGDKIYIPRIIMSPSDSKWPFILKRRQYPISVCFAMTINKSQGQSLEKVGLYLQRQVFTHGQLYVAMSRVTNRNGLKILISDEER-PSDNVAKNIVYKDIL 368
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: K3YXY4_SETIT (ATP-dependent DNA helicase n=2 Tax=Setaria italica TaxID=4555 RepID=K3YXY4_SETIT) HSP 1 Score: 166 bits (420), Expect = 9.270e-45 Identity = 87/186 (46.77%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 1 TYNSADTVFD-----DADARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDIL 543
TY S+DTV +++ + +P E LNSL PG+P H+L+LK+G P++LLRN+N S G +GTR+ ++ + F+E I TGT+ G +VY+PRI ++ +S PF L+RRQ P+ V ++TINK+QGQ+L V LYL QVFTHGQ YVA SRV+ L + + + +PE N NIVY++IL
Sbjct: 493 TYLSSDTVCKAISTKESEDQLYPTEFLNSLKFPGIPNHKLQLKVGLPIMLLRNINQSAGLCNGTRLTITQLGKWFIEAQIITGTNIGNKVYIPRIIMSPTESKWPFVLKRRQYPITVCFAMTINKSQGQSLKNVGLYLPKQVFTHGQLYVAVSRVTSREGLKILISDE-ESPEDNMAKNIVYKEIL 677
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: UPI0019D685D3 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D685D3) HSP 1 Score: 160 bits (405), Expect = 1.410e-44 Identity = 89/186 (47.85%), Postives = 119/186 (63.98%), Query Frame = 1
Query: 4 YNSADTVFDDADARP-----FPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDILR 546
Y SAD++ +DA +PVE LN+L PPH+LRLK+G P++LLRNLN S G +GTR+IV+ +E +I GT G + Y+PRI +T S PFTL RRQ P+ V S+TINK+QGQTL+ V +YL QVFTHGQ YVA SRV+ L + + N + G+ NIVY++IL+
Sbjct: 191 YLSADSISKCSDAVNDANILYPVEYLNTLNANNYPPHKLRLKVGVPIMLLRNLNQSLGLCNGTRLIVTSLGDNVIEAEIIIGTHTGEKTYIPRINLTTKASHWPFTLNRRQFPIKVCYSMTINKSQGQTLSNVGVYLKKQVFTHGQLYVALSRVTSKKGLKILIENDDGSC-GSKTQNIVYKEILQ 375
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: K3YD59_SETIT (ATP-dependent DNA helicase n=2 Tax=Setaria italica TaxID=4555 RepID=K3YD59_SETIT) HSP 1 Score: 166 bits (420), Expect = 3.330e-44 Identity = 87/186 (46.77%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 1 TYNSADTVFD-----DADARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDIL 543
TY S+DTV +++ + +P E LNSL PG+P H+L+LK+G P++LLRN+N S G +GTR+ ++ + F+E I TGT+ G +VY+PRI ++ +S PF L+RRQ P+ V ++TINK+QGQ+L V LYL QVFTHGQ YVA SRV+ L + + + +PE N NIVY++IL
Sbjct: 1112 TYLSSDTVCKAISTKESEDQLYPTEFLNSLKFPGIPNHKLQLKVGLPIMLLRNINQSAGLCNGTRLTITQLGKWFIEAQIITGTNIGNKVYIPRIIMSPTESKWPFVLKRRQYPITVCFAMTINKSQGQSLKNVGLYLPKQVFTHGQLYVAVSRVTSREGLKILISDE-ESPEDNMAKNIVYKEIL 1296
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: A0A814L516_9BILA (ATP-dependent DNA helicase n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814L516_9BILA) HSP 1 Score: 166 bits (420), Expect = 3.340e-44 Identity = 84/180 (46.67%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 4 YNSADTVFDDADARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDIL 543
Y S D+V +DA +P+E LN++ GMPPH+L LK+G P+ILLRN++ + G +GTR+I+S H +EC I G +A + V++PR+ + DS LPF L+R Q P+ A ++TINKAQGQTL V ++L VFTHGQ YVAFSRV++ L + L N + N NIVY ++L
Sbjct: 1146 YYSVDSVLNDAHTALYPLEFLNTINLSGMPPHKLNLKIGMPIILLRNVSPAEGLCNGTRLIISKFHSRVIECKIAVGEEANKTVFIPRMPLVPTDSGLPFELKRLQFPIRPAFAITINKAQGQTLEKVGVFLEEPVFTHGQLYVAFSRVTKRQNLKICLNN-----QKNVTKNIVYTEVL 1320
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: UPI001F5F9C42 (ATP-dependent DNA helicase PIF1-like n=2 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5F9C42) HSP 1 Score: 156 bits (395), Expect = 3.950e-44 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 4 YNSADTVFDDA--DARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNH-YRAPEGN--YFDNIVYEDIL 543
Y SADT+ D + FPVE LNSLTP GMP H L+LK+G ++LLRNL+ G +GTR+IV +++ + TG G+RV+VPR+++T +DS+LPFTL+RRQ P+ +A S+TINK+QGQT V +YL F+HGQ YVA SR L + H + N Y +N+V+ ++L
Sbjct: 92 YLSADTIETDDLNEINNFPVEFLNSLTPSGMPVHCLKLKIGAVIMLLRNLDLKAGLCNGTRLIVRALQNNYIDGQVLTGVSVGKRVFVPRVQLTQSDSNLPFTLKRRQFPVRLAYSMTINKSQGQTFDKVGIYLKNPCFSHGQLYVACSRTRSFNTLFFKIDEHSLQGMSFNKCYTNNVVFTNVL 276
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Match: A0A6S7PDI6_LACSI (ATP-dependent DNA helicase n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7PDI6_LACSI) HSP 1 Score: 154 bits (390), Expect = 4.110e-44 Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 49 FPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNASGGQADGTRVIVSVTHRTFVECDITTGTDAGRRVYVPRIRVTAADSDLPFTLRRRQLPLNVACSLTINKAQGQTLAAVDLYLHTQVFTHGQAYVAFSRVSEPAALTVALPNHYRAPEGNYFDNIVYEDILRK 549
+P+E LN LT PG+PPH+L LK+ P++LLRN+N G +GTR+IVS T +E I TGT +RVY+PRI+ SDLPF R+Q P+ V ++TINK+QGQ+L + +YL VF HGQ YVA SR + P ++ + L N + N N+VY+++L K
Sbjct: 29 YPIEYLNQLTFPGIPPHKLLLKVDCPIMLLRNINQKEGLCNGTRMIVSQLLPTLIEATIITGTSIEKRVYIPRIKFIHKSSDLPFVFSRKQFPVKVCYAMTINKSQGQSLRKIGIYLSQPVFAHGQLYVALSRATSPDSIRILL-NKTDTCKNNETKNVVYKELLHK 194 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6986.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6986.3.1 >prot_P-wetherbeei_contig6986.3.1 ID=prot_P-wetherbeei_contig6986.3.1|Name=mRNA_P-wetherbeei_contig6986.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=184bp TYNSADTVFDDADARPFPVELLNSLTPPGMPPHRLRLKLGTPVILLRNLNback to top mRNA from alignment at P-wetherbeei_contig6986:2525..3076- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6986.3.1 ID=mRNA_P-wetherbeei_contig6986.3.1|Name=mRNA_P-wetherbeei_contig6986.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig6986:2525..3076- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6986:2525..3076- >mRNA_P-wetherbeei_contig6986.3.1 ID=mRNA_P-wetherbeei_contig6986.3.1|Name=mRNA_P-wetherbeei_contig6986.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=552bp|location=Sequence derived from alignment at P-wetherbeei_contig6986:2525..3076- (Phaeothamnion wetherbeei SAG_119_79)back to top |