mRNA_P-wetherbeei_contig6982.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: D7FIM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM0_ECTSI) HSP 1 Score: 148 bits (373), Expect = 5.150e-33 Identity = 82/131 (62.60%), Postives = 96/131 (73.28%), Query Frame = 1
Query: 1627 DERRVEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIEPDGSLPDA-MAGDCRLRHVQWRHERHVP 2016
+E VEMTPLGR+PG RV RYLGSVSLHFIKESW AA+ GG VA FF F+ EV+AV+RA+VAALGGNA+LSYRL PQESGGK KN +YNMI+V GDA V+E D DA +A D R + +P
Sbjct: 1188 EEIMVEMTPLGRIPGARVIRYLGSVSLHFIKESW-AASRGGEVASFFHEFVMEVHAVLRANVAALGGNALLSYRLLPQESGGKVYKNQVYNMISVRGDAVVVEYDRPAMDASLANDPRKSQATYVKMEGLP 1317
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A836CKY6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.230e-30 Identity = 70/126 (55.56%), Postives = 93/126 (73.81%), Query Frame = 3
Query: 126 YRDGREAFVLELDDETDEDAMAALLDKQPPPGVTLCAGGYVPGGPGEVANAHLVVAIKRAKWNGSTTGGPLAQSLAQLSSSLLARLCFGVRDLVPVALMGLATRINVTADNFVELVLTGVAVLQPL 503
Y D +E +++E+DDETDED ++ LLDKQPP G+T + VPG P +AN+ +VVA+KRAKWNG +GG L +L+ L L ARL F +RDL P AL GL+ ++++TADN VELV TG+AVLQPL
Sbjct: 1088 YTDNKETYLMEVDDETDEDCLSVLLDKQPPAGITFVSSCIVPGAPLGLANSQMVVAMKRAKWNGVASGGQLNAALSGLYGELHARLFFKLRDLAPCALCGLSVQVSLTADNMVELVATGIAVLQPL 1213
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A7S3M7H6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7H6_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.010e-24 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSA---AAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIEPDGSLPDAMAG 1968
V +TPL VPG RV RYLG V LHF+K+++S GGG++ F+ + M+E +AV RAHVAALGGNA+L YRL PQESGG+ S+N Y+M++V+GDA ++E D A+ G
Sbjct: 178 VLLTPLNEVPGARVKRYLGPVLLHFLKDAFSVRGVVGVGGGMSSFYYLLMSEASAVARAHVAALGGNALLFYRLVPQESGGRASRNQPYSMLSVTGDAVLLEFDTPSSSAITG 290
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A2P4X5M0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5M0_9STRA) HSP 1 Score: 109 bits (272), Expect = 8.430e-23 Identity = 53/99 (53.54%), Postives = 74/99 (74.75%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIE 1935
+E+TPLG +PG V RYLG V+LHFIKESW+ GG + F+ +F++E A+VRAHV +LGGNAML++RL P ES + +N +YNMI+++GD +IE
Sbjct: 139 IELTPLGYIPGAHVIRYLGRVTLHFIKESWTVRESGG-LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIES-SQLYRNQVYNMISITGDVVMIE 235
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A1V9Z9F0_9STRA (C2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9F0_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.920e-22 Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIEPDGS 1947
+E+TPL VPG+++ RYLG ++LHFIKESW+ GG + FF +F++E AVVRAHV ALGGNAMLS+RL P ES + +N +YNMI+V+GDA ++E D S
Sbjct: 938 IELTPLSYVPGSKILRYLGRITLHFIKESWTVRELGG-LGAFFHLFLSEAIAVVRAHVRALGGNAMLSFRLVPIES-SQLYRNQVYNMISVTGDAVLLERDQS 1038
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A067C3J6_SAPPC (C2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C3J6_SAPPC) HSP 1 Score: 113 bits (283), Expect = 4.000e-22 Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIEPDGS 1947
+E+TPL VPG+++ RYLG ++LHFIKESW+ GG + FF +F++E AVVRAHV ALGGNAMLS+RL P ES + +N +YNMI+V+GDA ++E D S
Sbjct: 965 IELTPLSYVPGSKILRYLGRITLHFIKESWTVRELGG-LGAFFHLFLSEAIAVVRAHVRALGGNAMLSFRLVPIES-SQLYRNQVYNMISVTGDAVLLERDQS 1065
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A1W0A829_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A829_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.740e-22 Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIEPD 1941
+E+TPL VPG+++ RYLG ++LHFIKESW+ GG + FF +F++E AVVRAHV ALGGNAMLS+RL P ES + +N +YNMI+V+GDA ++E D
Sbjct: 825 IELTPLSYVPGSKIIRYLGRITLHFIKESWTVRELGG-LGAFFHLFLSEAIAVVRAHVRALGGNAMLSFRLLPIES-SQLYRNQVYNMISVTGDAVLLERD 923
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A425D1S8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D1S8_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.070e-22 Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSG 1917
+E+TPL VPG ++ RYLG ++LHFIKESW+ GG + FF +F++E +VVRAHV ALGGNAMLS+RL P ES + +N +YNMI+V+G
Sbjct: 77 IELTPLSYVPGAKILRYLGRITLHFIKESWTVRECGG-LGAFFHLFLSEAISVVRAHVRALGGNAMLSFRLVPIES-SQLYRNQVYNMISVTG 167
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A0P1AZ73_PLAHL (Predicted Ca2-dependent phospholipid-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZ73_PLAHL) HSP 1 Score: 112 bits (279), Expect = 1.230e-21 Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIEPDG 1944
+E+TPLG +PG V RYLG V+LHFIKESW+ GG + F+ +F++E A+VRAHV +LGGNAML++RL P ES + +N +YNMI+++GD +IE +G
Sbjct: 987 IELTPLGYIPGAHVTRYLGRVTLHFIKESWTVRESGG-LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIES-SQLYRNQVYNMISITGDVVMIEREG 1086
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Match: A0A3F2S1M7_9STRA (C2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1M7_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.950e-21 Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 1639 VEMTPLGRVPGTRVARYLGSVSLHFIKESWSAAAGGGGVAGFFQVFMTEVNAVVRAHVAALGGNAMLSYRLRPQESGGKTSKNVLYNMITVSGDAAVIE 1935
+E+TPLG +PG V RYLG V+LHFIKESW+ GG + F+ +F++E A+VRAHV +LGGNAML++RL P ES + +N +YNMI+++GDA +IE
Sbjct: 847 IELTPLGYIPGAHVTRYLGRVTLHFIKESWTVRENGG-LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIES-SQLYRNQVYNMISITGDAVMIE 943 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6982.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6982.1.2 >prot_P-wetherbeei_contig6982.1.2 ID=prot_P-wetherbeei_contig6982.1.2|Name=mRNA_P-wetherbeei_contig6982.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=577bp MSPRTTLSSSCSRASPCCSRCRRHRCWLRVPRAGCAAAAAAARTATGVGAback to top mRNA from alignment at P-wetherbeei_contig6982:72..3112- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6982.1.2 ID=mRNA_P-wetherbeei_contig6982.1.2|Name=mRNA_P-wetherbeei_contig6982.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3041bp|location=Sequence derived from alignment at P-wetherbeei_contig6982:72..3112- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6982:72..3112- >mRNA_P-wetherbeei_contig6982.1.2 ID=mRNA_P-wetherbeei_contig6982.1.2|Name=mRNA_P-wetherbeei_contig6982.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1731bp|location=Sequence derived from alignment at P-wetherbeei_contig6982:72..3112- (Phaeothamnion wetherbeei SAG_119_79)back to top |