mRNA_P-wetherbeei_contig698.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig698.2.2
Unique NamemRNA_P-wetherbeei_contig698.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A7S4EUI0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EUI0_CHRCT)

HSP 1 Score: 111 bits (278), Expect = 1.490e-22
Identity = 114/415 (27.47%), Postives = 185/415 (44.58%), Query Frame = 2
Query:  176 LQVPMNACLTDDDVCFADALRGFSEGHCDLSGAGAIHWMG-----KMATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLT--CLQD---PDFETRASSLYFFHANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLV---AGPVAAGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSDDLAFVTNEMDMPSHKVRLLEGIILPRENSFRLGWGGFEDDFIKVLRLFFTTADDLPA--GGRWEDAITAGAGAGAADGRGASSSFDAAERRVVEALLRRCRQRLASFPTTLEEDLALL--EGSATGGGERGWLQGAALEHRIGKKRLLLDAIGRLKAAS 1369
            L+VP+   L+DD   F +   G            A  W+      +++  L  E+AKG ES +  +I+ LP          A  L+  CL+    P    +A     +  ++H + ++ +G   GA  P L    +  AL  + +RS+ ++  E              G RR L+P +DMLNHD           D    ++      P+ AG Q+FL+YG KS++++L+ YGF      +  AD++ +G A+T++DLA    + D    KV LL         +F++  G  +   +  LRL   T  +L +   G W  A+              +   D  E+RV +AL RR +  L +  +++EED ALL  EGS      R      A++ R+ +KRLL + I  +K+ S
Sbjct:  107 LRVPVALALSDDPEEFRETPFG--------QAVPASEWLRIPVDMRLSLRLLAEKAKGAESCWKDFISLLP-----AEYTSARHLSDACLRQAGSPFVTEQAGLCKAYLTDMHIE-LSRLGSQYGAPVPSLEELGW--ALDAVHTRSFTVDAGE------------ERGVRRYLIPFVDMLNHDENCGCGFAYDEDNECFEVRRFGGEPLNAGDQIFLDYGAKSSEEMLVMYGFVPS--TVGEADAITLGGAYTTEDLAAAPGDEDFRREKVELLNLFRYSAPRTFQIAPGNVDPAIVCALRLALLTPAELESECAGSWYRAVVH------------APVSDDNEQRVAQALRRRLQDALEADKSSIEEDEALLLAEGSDLDDAMR-----CAVQLRLNRKRLLAELIRIVKSFS 474          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A077WVM0_9FUNG (SET domain-containing protein n=3 Tax=Lichtheimia TaxID=688353 RepID=A0A077WVM0_9FUNG)

HSP 1 Score: 76.3 bits (186), Expect = 5.770e-11
Identity = 68/212 (32.08%), Postives = 101/212 (47.64%), Query Frame = 2
Query:  299 MATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFET----RASSLYFFHANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSY---LIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSR-TLLRPGP-DGTTLQLVAG-PVAAGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSD 904
            M+  +  +R  G++S +APY+  LP         D DD+  +++    T    R  S+Y  +  L  +         G D   +S +++L A  ++ SRS+   LI+P +             D P  +L PLLD LNH   ++ T +R G  +  TL  V G P   G Q+F NYGPKSN++LLL YGF   Y   N  D   + P F+ D
Sbjct:   76 MSIFVAQQRNLGSQSFYAPYLDVLPAKIMTTLFFDDDDMRFIENTTLATATVERKRSIYEEYEKLSKEP--------GVDN--ISWNDYLWAYCVLSSRSFPYKLIDPSK------------EDTPSEVLFPLLDALNHKPNTKITWMRSGDVENGTLSFVTGQPADQGQQLFNNYGPKSNEELLLGYGFCFPY---NEYDHFAIKPNFSQD 262          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A836CJC2_9STRA (Putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC2_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.980e-10
Identity = 99/369 (26.83%), Postives = 152/369 (41.19%), Query Frame = 2
Query:  299 MATALQWERAKGTESQFAPYIAALPP---PPPLLSMCDADDLTCLQDPDF----ETRASSLYFFHANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLVAGPVAAGA------QVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSDDLAFVTNEMDMPSHKVRLLEGIILPRENSFRLGWGGFEDDFIKVLRLFFTTADDLPAGGRWEDAITAGAGAGAADGRGASSSFDAAERRVVEALLRRCRQRLASFPTTLEEDLALLEGSATGGGERGWL------QGAALEHRIGKKRLLLDAI 1348
            +A  L  ERAKG +S +APYI  LP      P  S  + ++L+ L+        E+ A  L   +A L   ++        ADA    +  F  A +++ SR+       LA+        L DG    LVP  D+LNH+  +   +     G   ++    V +        Q++++YGPKSN DLLL YGF       N  D   +  A   +D  F          K   L+G+  P   +F +    + D+ ++ LRL     +D  AG   +    A            +   DA E RV+  +   C   L  +PTT E+D A++        +RG        Q  A++HR  +KR+L   I
Sbjct:  193 IALLLMGERAKGKDSFWAPYINVLPTLDEVAPTWSWPE-EELSLLEGSPVIRSTESMARKLEAEYAALQQGILTKHAALFAADAYTFDA--FRWAFAMLFSRAI-----RLAS--------LSDGEAIALVPYADLLNHNPFANAYVDARQTGWLKKVDEVAVYSDRAYKRMEQIYISYGPKSNADLLLLYGFALDRNPFNSVD---ITVALDGNDPLF--------PQKKAFLDGVGQPTTMNFPMYNDRYPDEALQYLRLICLAPEDNKAGVELDRLEFA------------NKISDANELRVLSLIQAACEAALEGYPTTEEQDTAVMS-------DRGMFGALTKNQRMAVKHRRQEKRILKRTI 515          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A812XH99_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XH99_SYMPI)

HSP 1 Score: 73.9 bits (180), Expect = 4.600e-10
Identity = 69/235 (29.36%), Postives = 106/235 (45.11%), Query Frame = 2
Query:  176 LQVPMNACLTDDDVCFADALRGFSEGHCDLSGAGA--IHWMGKMATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFETRASSLYFFHANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLVAG-PVAAGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGAD 871
            L+VP+   L       AD   G S+G      A +  + W  ++A  +   R    + ++ P++ + PP P L    + +DL  +QD DFE +A    F+    + D +AA  +  G      S  +F  A+  + SR   ++ ++L   GG+         RRLL+PLLDM NHD     +   G DG  + L A   +  G  V  +YG   N+   LYYGF    P +N  D
Sbjct:  703 LEVPLKLTL-------ADGCEGPSQGPVTAGPAWSKRLPWNVQLALGVLQRRQ---DPEWRPFLDSWPPAPVLPKDLEDEDLEEVQDEDFEVKAGGTLFWVEERYEDALAA-WEEAGETGTFWSEEDFRWAIVNVWSRCCRLDLQDL---GGI---------RRLLIPLLDMGNHDTEPSAVFDLGGDGKAVCLTATRDLQPGDAVTYSYGEHPNEHFALYYGFV---PQLNPYD 911          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A1C7NQN2_9FUNG (Ribosomal lysine N-methyltransferase set10 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NQN2_9FUNG)

HSP 1 Score: 72.0 bits (175), Expect = 1.300e-9
Identity = 68/208 (32.69%), Postives = 100/208 (48.08%), Query Frame = 2
Query:  302 ATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFET----RASSLYFFHANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSR-TLLRPGP-DGTTLQLVAGPVA-AGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSD 904
            A  L  E+AKG  S + PYI  LP         D  DLT +++ + E+    R ++LY  +  L  D+   +      D   +S  +FL + S+  SR++   P  L      + P   D   ++L PL D LNH   ++ T  R G  D  +L  +AG    AG Q+F NYGPKSN++LLL YGF   +   N  D + +   F+ D
Sbjct:   74 ALFLVLEKAKGETSFYWPYINILPKSIKTAMSFDESDLTFVKNTNLESVVRERKANLYAEYEGLLNDLPETL------DKESISWEDFLWSFSVFSSRAF---PYTL------IDPHTEDQSAQVLCPLADALNHKPNTKITWSREGDMDNGSLTFIAGEAHNAGDQIFNNYGPKSNEELLLGYGFCFEH---NEHDFVALKTNFSQD 263          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A8J4F2B9_9CHLO (SET domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F2B9_9CHLO)

HSP 1 Score: 70.5 bits (171), Expect = 3.590e-9
Identity = 89/393 (22.65%), Postives = 160/393 (40.71%), Query Frame = 2
Query:  287 WMGKMATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFETRASSLYFFHANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSY------------------------------LIEPEELAASGGMMPPF--------LRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLVAG-PVAAGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSDDLAFVTNEMDMPSHKVRLLEGIILPRE-NSFRLGWGGFEDDFIKVLRLFFTTADDLPAGGRWEDAITAGAGAGAADGRGASSSFDAAERRVVEALLRRCRQRLASFPTTLEEDLALLEGSATGGGERGWL---QGAALEHRIGKKRLL 1336
            W  K+A  + W + +G++S  A ++A LP    +        +  LQ P    + +        L+ D+++  G    A  P  +  +F+ A+S ++SR++                              L +P++  ++   +  F         R   +  + PL+D  NH +  ++ +     G +  +VA      G QVF++YGP+SND L+ YYGF       N    + V     +D L +VT    +   ++  L+   L        +   GF  + ++ +R    +  +  AG      I++ A AGA D           E ++   L    R  L +  ++L+ED+ALL G       +G L   + AA+  R+ KKR+L
Sbjct:  138 WFAKIAAMILWHKRRGSQSPLASWVAQLPADTGVPVRWSERQIAALQYPHLIRQVTEQQREWQQLYDDLVSK-GTPSSAQPP--TREDFIWAMSCVRSRTFSGPYVGSTLQDRLRTGGLVAVLALGNTVLGLADPQKTLSAAIAVLLFNVLYEVILSRSLKQYAICPLIDFFNHSSAVQSEVSYNYFGDSYSVVASREFTKGEQVFISYGPQSNDSLMQYYGFAEA----NNPQDVYV----MTDMLRWVTAVQPVGQTRLDALKASALAGSLQQVVIQRAGFPAEALQAVRFLLASDMEAAAG------ISSFAKAGAPD----------QEAQLALVLAEVVRHELGNLGSSLQEDVALLNGXXXXXXRKGGLSLAEAAAVAFRVEKKRVL 503          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A1Y1I8T8_KLENI (SET domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8T8_KLENI)

HSP 1 Score: 70.5 bits (171), Expect = 4.110e-9
Identity = 61/192 (31.77%), Postives = 93/192 (48.44%), Query Frame = 2
Query:  287 WMGKMATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFETRASSLYFFHANLHADVIAAIGDSGGADAPLL----SSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLVAGP-VAAGAQVFLNYGPKSNDDLLLYYGFTTR 847
            W  ++A+AL  E+AKG  S F  YI +LP         D +DL  ++     T+ ++   +   LH             +AP L    S   F  A++++ SRS+ ++   L ++ G      R G    LVPL+D+LNH+A         PDG + QL A   ++ G +V  +YG + NDDLL+ YGF  R
Sbjct:  177 WPVRLASALLREKAKGPASPFYYYIQSLPDEVLAAVSLDDEDLKRVKYEIGRTKLAAQRPWMQTLHRRC--------SREAPDLIAHASWHEFRWAVAVVLSRSFALKGVRLESAEGATSADRR-GDGSGLVPLMDLLNHNAWFNAFWETAPDGRSTQLKAARHISKGEEVCDSYGRRGNDDLLISYGFVIR 359          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A1Q9EGC7_SYMMI (Histone-lysine N-methyltransferase setd3 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EGC7_SYMMI)

HSP 1 Score: 67.8 bits (164), Expect = 2.200e-8
Identity = 100/384 (26.04%), Postives = 149/384 (38.80%), Query Frame = 2
Query:  176 LQVPMNACLTDDDVCFADALRGFSEGHCDLSGAGA--IHWMGKMATALQWERAKGTESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFETRASSLYFFHANLHADVIAAIGDSGGADAPLL-SSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLVAG-PVAAGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSDDLAFVTNEMDMPSHKVRLLEGIILPRENSFRLGWGGFEDDFIKVLRLFFTTADDLPAGGRWEDA-----ITAGAGAGAADGRGASSSF-----------DAAERRVVEALLRRCRQRLASFPTTLEEDLALLEGSAT 1267
            L+VP+   L       AD   G SEG        +  + W  ++A  +    A+  E  ++ ++ + P  P L    + +DL   QD DFE +A    F+    + D  AA   +  AD  +  S   F  A++ + SR   ++ EEL   GG+         RRLL+PLLDM NHD+    +   G  G  + L A   +  G  V  +YG   N+   LYYGF    P  N  D +                       KV L                        KVL+    T    P  G WE A     + +G  A +   R  S              +A+E  V+ A+   C+   A +PTTL+ED A+L+  ++
Sbjct:   79 LEVPLGMTL-------ADGCEGPSEGAVAAGPPWSKQLPWNVQLALGVL---ARRKEPDWSLFLDSWPAAPTLPKDMEDEDLEEAQDEDFEVKAGGTLFWLEERYEDAFAAWEQAEAADPKVFWSEEEFRWAMAHVWSRCCRLDLEEL---GGI---------RRLLIPLLDMGNHDSEPSAVFDLGRSGRAVCLSATRDLQEGDPVTYSYGEHPNEHFALYYGFV---PESNPYDHV-----------------------KVSLT-----------------------KVLQCL--TLAGFPGAGDWEAARMEEVVRSGVAANSLPLRARSPPLGLLQALFALLPEASEATVLRAVAVACQCLEAEYPTTLKEDQAILDSPSS 389          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: A0A0M0JYJ3_9EUKA (SET domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYJ3_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 2.460e-8
Identity = 69/235 (29.36%), Postives = 100/235 (42.55%), Query Frame = 2
Query:  176 LQVPMNACLTDDDVCFADALRGFSEGHCDLSGAGAIHWMGKMATALQWERAKGTESQFAPYIAALPPPPPLLSM-CDADDLTCLQDPDFETRASSLYFFH------ANLHADVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSYLIEPEELAASGGMMPPFLRDGPRRLLVPLLDMLNHDAGSRTLLRPG---PDGTTLQL-VAGPVAAGAQVFLNYGPKSNDDLLLYYGFTTR 847
            L+VP+   ++D D       R      C  S    + W  ++A A+   R    E    P+IA+ P  PP L + CDAD+L    DP    +A   +F+       A   A+   A  +     A   S++ F  AL L+ SR   +   E              G RRLLVPLLD+ NH++    +   G       T++L  A P+ AG  V + YG  +N    LYYGF  +
Sbjct:   59 LEVPLALTISDVDGSDETTPRLPGAAPCWTS---QLPWNVQLALAVLERRRVDPED---PFIASWPVTPPALPIRCDADELALASDPSVAQKAGEAFFWLDEQYWLAREAAEAAEAADEDDKLMATFPSANEFRDALELVWSRCLRLTTRE-------------HGVRRLLVPLLDIANHESIPSAMYAFGIARNGEPTIRLHAAQPLRAGEPVTITYGEHTNAHFALYYGFVPQ 274          
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Match: UPI001959C717 (SET domain-containing protein n=1 Tax=Archangium primigenium TaxID=2792470 RepID=UPI001959C717)

HSP 1 Score: 67.4 bits (163), Expect = 2.990e-8
Identity = 72/247 (29.15%), Postives = 100/247 (40.49%), Query Frame = 2
Query:  665 LVPLLDMLNHDAGSRTLLRPGPDGTTLQLVA-GPVAAGAQVFLNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSDDLAFVTNEMDMPSHKVRLLEGIILPRENSFRLGWGGFEDDFIKVLRLFFTTADDLPAGGRWEDAITAG---AGAGAADGRGASSSFDAAERRVVEALLRRCRQRLASFPTTLEEDLALLEGSATGGGERGWLQGAALEHRIGKKRLLLDAIGRLKAASVATILPPE 1393
            LVPL DMLNH      L     DG   ++ A   VAAG +V  +YG KSND +LL++GF T +   N  D + +       D      +  +            +PRE +            +  LR+   T +++         I A     GA   +  G  +     E RV+EAL   C  RLA F T+ EED   L   + G   R       L  R  +KR+L D +G  + A     LP E
Sbjct:  205 LVPLADMLNHRRPPDVLWETSEDGRFFEMTAQNAVAAGLEVHDSYGAKSNDLMLLHFGFVTEH---NERDEVFLSLGLPEGDALGAMKQSLLALPSPTAFRPFKVPREVA-----NASTQLMLSFLRVARATPEEIM--------ILANRLIGGAKTIEPLGVPN-----EARVMEALAAACEARLAGFDTSFEEDERRLREDSLGANARN-----CLLVRREEKRVLRDYLGFAQTAQALLRLPRE 425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig698.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4EUI0_CHRCT1.490e-2227.47Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A077WVM0_9FUNG5.770e-1132.08SET domain-containing protein n=3 Tax=Lichtheimia ... [more]
A0A836CJC2_9STRA2.980e-1026.83Putative ribulose-1,5-bisphosphate carboxylase/oxy... [more]
A0A812XH99_SYMPI4.600e-1029.36Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A1C7NQN2_9FUNG1.300e-932.69Ribosomal lysine N-methyltransferase set10 n=1 Tax... [more]
A0A8J4F2B9_9CHLO3.590e-922.65SET domain-containing protein n=2 Tax=Volvox afric... [more]
A0A1Y1I8T8_KLENI4.110e-931.77SET domain-containing protein n=1 Tax=Klebsormidiu... [more]
A0A1Q9EGC7_SYMMI2.200e-826.04Histone-lysine N-methyltransferase setd3 n=4 Tax=S... [more]
A0A0M0JYJ3_9EUKA2.460e-829.36SET domain-containing protein n=1 Tax=Chrysochromu... [more]
UPI001959C7172.990e-829.15SET domain-containing protein n=1 Tax=Archangium p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig698contigP-wetherbeei_contig698:2627..5130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3067.XP_002948672.1
PFAMsRubis-subs-bind,SET
Model size1630
Max annot lvl3041|Chlorophyta
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K05302,ko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.04e-11
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota,37WHH@33090|Viridiplantae,34I4B@3041|Chlorophyta
EC2.1.1.43
DescriptionRubisco LSMT substrate-binding
Cds size1254
COG categoryS
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig698.2.2prot_P-wetherbeei_contig698.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig698 2816..4943 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186949.4916263-UTR-P-wetherbeei_contig698:2626..28151683186949.4916263-UTR-P-wetherbeei_contig698:2626..2815Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig698 2627..2815 -
1683186949.5545125-UTR-P-wetherbeei_contig698:4943..51301683186949.5545125-UTR-P-wetherbeei_contig698:4943..5130Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig698 4944..5130 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186949.5037577-CDS-P-wetherbeei_contig698:2815..30221683186949.5037577-CDS-P-wetherbeei_contig698:2815..3022Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig698 2816..3022 -
1683186949.5144598-CDS-P-wetherbeei_contig698:3216..34321683186949.5144598-CDS-P-wetherbeei_contig698:3216..3432Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig698 3217..3432 -
1683186949.5247126-CDS-P-wetherbeei_contig698:3679..39161683186949.5247126-CDS-P-wetherbeei_contig698:3679..3916Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig698 3680..3916 -
1683186949.5348504-CDS-P-wetherbeei_contig698:4186..43901683186949.5348504-CDS-P-wetherbeei_contig698:4186..4390Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig698 4187..4390 -
1683186949.5448008-CDS-P-wetherbeei_contig698:4553..49431683186949.5448008-CDS-P-wetherbeei_contig698:4553..4943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig698 4554..4943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig698.2.2

>prot_P-wetherbeei_contig698.2.2 ID=prot_P-wetherbeei_contig698.2.2|Name=mRNA_P-wetherbeei_contig698.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp
MNACLTDDDVCFADALRGFSEGHCDLSGAGAIHWMGKMATALQWERAKGT
ESQFAPYIAALPPPPPLLSMCDADDLTCLQDPDFETRASSLYFFHANLHA
DVIAAIGDSGGADAPLLSSSNFLSALSLIQSRSYLIEPEELAASGGMMPP
FLRDGPRRLLVPLLDMLNHDAGSRTLLRPGPDGTTLQLVAGPVAAGAQVF
LNYGPKSNDDLLLYYGFTTRYPNINGADSLCVGPAFTSDDLAFVTNEMDM
PSHKVRLLEGIILPRENSFRLGWGGFEDDFIKVLRLFFTTADDLPAGGRW
EDAITAGAGAGAADGRGASSSFDAAERRVVEALLRRCRQRLASFPTTLEE
DLALLEGSATGGGERGWLQGAALEHRIGKKRLLLDAIGRLKAASVATILP
PEGVSSYWSVDGPSSRG*
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mRNA from alignment at P-wetherbeei_contig698:2627..5130-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig698.2.2 ID=mRNA_P-wetherbeei_contig698.2.2|Name=mRNA_P-wetherbeei_contig698.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2504bp|location=Sequence derived from alignment at P-wetherbeei_contig698:2627..5130- (Phaeothamnion wetherbeei SAG_119_79)
GCCCCTTGCTGAGACTGGCCGATTTTGACGGCGTCCGGGGTGTCCAAGCT GTCAGTGTAATTCCCGAGGAGACCGTCGTTCTCGAGGTTGATTCCTTTCC CTCCAAGTTGTGCCTTGACATTGCACGAAAAGCGAAAGTTTCGAATTGTT CTTTCCATTCTCACGCCTCTGTCACCTCCAGGTCCCGATGAATGCCTGCT TGACGGACGACGATGTCTGCTTCGCAGATGCTCTCCGCGGCTTCTCTGAA GGTCATTGTGACCTGTCGGGAGCCGGTGCGATCCATTGGATGGGGAAAAT GGCCACCGCGCTGCAATGGGAGAGAGCCAAAGGCACTGAGTCGCAGTTTG CGCCGTACATCGCCGCTCTGCCGCCACCTCCACCGCTGCTCAGCATGTGC GACGCCGACGACCTGACTTGTCTTCAAGATCCGGACTTTGAAACGCGCGC CAGCTCTTTGTACTTCTTCCACGCTAATCTGCATGCAGATGTCATCGCGG CGATTGGCGACAGCGGTGGGGCCGATGCTCCTTTGCTCTCGTCGAGCAAC TTCCTCTCGGCGCTTTCACTGATCCAGGTACGGAAGAAATTCCGAGGCAG CGAAATTGTGGTCGCGTCAAGCCCCCGCTTGAAGGAAGCTCTGGAAGCAA AGTCTACGGATTTGGGAAGGTTCTCAGACATCAAACGAAGGAGCCGCCCC GCCCTTCCTTCCTGGGTCGCCGCCCAACCAACGAAACCAGAGCCGGAGCT ACCTGATAGAGCCTGAGGAGCTCGCAGCCTCGGGAGGAATGATGCCGCCC TTCCTGCGTGACGGGCCGCGGCGGCTGCTGGTGCCGCTGCTGGACATGCT GAACCACGATGCCGGCAGCCGGACGCTGCTGCGACCGGGCCCCGACGGGA CGACGCTGCAGCTTGTCGCCGGACCCGTCGCCGCCGGAGCGCAGGTGGGG CGTCCGACAATCGGTGGTGTTTTGGCTTGAGCAATAAATAGATTCTTAAG CTGATTCAAATCAGAGCTTTTGACTCATGTGCATGAGATTACGGGCGTTC TGTGTAGTTTAACGTCAATGCGCTTTTCCGCGCCTGCCGCCGGTGCTTCA AATCCCAAGTCGTCTTAAAATCGTATTCCTGTAGCTTAGAACAATATTCT CCTTCGTCCCCAACGCCTGCCTCGCGTGCTTCTTCCCTTTTGTTCCACTG GGAATTCTCAATAGGTATTCCTGAACTACGGCCCAAAAAGCAACGATGAC CTGCTGCTTTACTACGGCTTTACCACCCGCTACCCGAACATCAACGGTGC CGACTCGCTCTGTGTCGGGCCGGCATTCACGTCGGACGACCTCGCCTTCG TAACCAACGAAATGGACATGCCGTCGCACAAGGTCCGGCTGCTGGAAGGG ATCATCTTGCCGAGGGAGAACTCCTTCCGCCTCGGCTGGGGCGGCTTTGA GGTGAGAAGTTCGAATGGGTTTGCGGCACCGCTGCTCGCTTTGCGGTATT GCTGACGTTGGTGGGCCTGCTGAGGGTTGGTGGTCTGTTGAGCAGCAAAG GCCTTTAGGCACGCATTAATGAAGAGAGTTTATCAGAGGCGGTTTTACCG GTCAGATCAGCAACACAGCGCTTATTCACGGGCTGATTTTCAAGTATTCT GGAATGATCCCTTCTCTCCGATCTAAAAAAACGACTCTCCGGCGACAGGA CGACTTTATCAAAGTCTTGCGGCTATTCTTCACAACCGCCGACGATCTGC CTGCTGGCGGCCGCTGGGAGGATGCCATCACTGCCGGCGCCGGCGCTGGC GCCGCGGATGGTAGAGGCGCCAGCTCGTCGTTCGATGCGGCGGAACGCCG GGTGGTTGAGGCACTCCTTCGACGCTGCCGGCAGCGCCTGGCATCTTTTC CGACGACTCTGGAGGTGACGCCAAGATACGCCAAGATTGCACTCCTTAAA TCTCTTTCCTGCATTACAAAGTTTGCAAAATGGGATTGGCAATGTTTCAT TTTCCCGCTTTTGCAGCCTACTACACTGCTTCTCGGCACCCCTTGATGCG TTGCAGAGATGATGTGGCCCAAGCTTTCCATTTCCTGTCTTTGCATGTGA ACCCTCAGGAGGATTTAGCGCTGCTGGAGGGGAGTGCCACAGGGGGCGGC GAAAGAGGGTGGCTGCAAGGGGCAGCACTGGAGCACCGAATAGGCAAGAA AAGGCTGCTGTTGGATGCGATTGGGAGGCTCAAGGCTGCTTCTGTGGCGA CGATCTTACCTCCAGAGGGGGTTTCTAGTTATTGGTCGGTCGACGGCCCG TCGTCGAGAGGTTAAATTGACGGAACAAGCACAGAGACAAGTTCAATTAT TGTTTGGGGTAGACAAAGGCAGTGTTCGATGTCAGATAAGTTGATAGCTA CTGTGGCATTTAGCCCATTAAGAGGAAACCAATCCCATCGCGCTCTTTAT GCCAAGCTCCTCCCATGCATCCACGAGCCTATTCTGCCATCGCGCGACAT CTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig698:2627..5130-

>mRNA_P-wetherbeei_contig698.2.2 ID=mRNA_P-wetherbeei_contig698.2.2|Name=mRNA_P-wetherbeei_contig698.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig698:2627..5130- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATGCCTGCTTGACGGACGACGATGTCTGCTTCGCAGATGCTCTCCG
CGGCTTCTCTGAAGGTCATTGTGACCTGTCGGGAGCCGGTGCGATCCATT
GGATGGGGAAAATGGCCACCGCGCTGCAATGGGAGAGAGCCAAAGGCACT
GAGTCGCAGTTTGCGCCGTACATCGCCGCTCTGCCGCCACCTCCACCGCT
GCTCAGCATGTGCGACGCCGACGACCTGACTTGTCTTCAAGATCCGGACT
TTGAAACGCGCGCCAGCTCTTTGTACTTCTTCCACGCTAATCTGCATGCA
GATGTCATCGCGGCGATTGGCGACAGCGGTGGGGCCGATGCTCCTTTGCT
CTCGTCGAGCAACTTCCTCTCGGCGCTTTCACTGATCCAGAGCCGGAGCT
ACCTGATAGAGCCTGAGGAGCTCGCAGCCTCGGGAGGAATGATGCCGCCC
TTCCTGCGTGACGGGCCGCGGCGGCTGCTGGTGCCGCTGCTGGACATGCT
GAACCACGATGCCGGCAGCCGGACGCTGCTGCGACCGGGCCCCGACGGGA
CGACGCTGCAGCTTGTCGCCGGACCCGTCGCCGCCGGAGCGCAGGTATTC
CTGAACTACGGCCCAAAAAGCAACGATGACCTGCTGCTTTACTACGGCTT
TACCACCCGCTACCCGAACATCAACGGTGCCGACTCGCTCTGTGTCGGGC
CGGCATTCACGTCGGACGACCTCGCCTTCGTAACCAACGAAATGGACATG
CCGTCGCACAAGGTCCGGCTGCTGGAAGGGATCATCTTGCCGAGGGAGAA
CTCCTTCCGCCTCGGCTGGGGCGGCTTTGAGGACGACTTTATCAAAGTCT
TGCGGCTATTCTTCACAACCGCCGACGATCTGCCTGCTGGCGGCCGCTGG
GAGGATGCCATCACTGCCGGCGCCGGCGCTGGCGCCGCGGATGGTAGAGG
CGCCAGCTCGTCGTTCGATGCGGCGGAACGCCGGGTGGTTGAGGCACTCC
TTCGACGCTGCCGGCAGCGCCTGGCATCTTTTCCGACGACTCTGGAGGAG
GATTTAGCGCTGCTGGAGGGGAGTGCCACAGGGGGCGGCGAAAGAGGGTG
GCTGCAAGGGGCAGCACTGGAGCACCGAATAGGCAAGAAAAGGCTGCTGT
TGGATGCGATTGGGAGGCTCAAGGCTGCTTCTGTGGCGACGATCTTACCT
CCAGAGGGGGTTTCTAGTTATTGGTCGGTCGACGGCCCGTCGTCGAGAGG
TTAA
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