mRNA_P-wetherbeei_contig6972.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: A0A6C1B0W0_9RHOO (DUF1415 domain-containing protein n=1 Tax=Nitrogeniibacter mangrovi TaxID=2016596 RepID=A0A6C1B0W0_9RHOO) HSP 1 Score: 149 bits (377), Expect = 1.060e-38 Identity = 83/191 (43.46%), Postives = 112/191 (58.64%), Query Frame = 3
Query: 381 PDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLRVVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAEHMAGLVEKCVADGEA 953
P+A ATRHW++ VVV L LCP+A L DR+R V +E +D + L++ + EL L D+ T +++ P AL DF D+ D L+ MRL G +Q+A+FHP YQF G DDV N TNRSP+P LHL+RE + AV +Y D + RN E +E LGAEHM L++ C A G+A
Sbjct: 3 PEAVIAATRHWVETVVVDLNLCPFAKRELVRDRIRFV--VSEADDADTLVDDLERELQWLQDN---DAVETTLLIHPQALTDFDDYNQFLDVADVLLSQMRLSGELQVASFHPDYQFAGTEADDVENTTNRSPYPMLHLIREASLEAAVMNY----PDPENIPARNIETVEALGAEHMRALLQACFARGKA 184
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: D8LHS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHS7_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.750e-38 Identity = 93/220 (42.27%), Postives = 120/220 (54.55%), Query Frame = 3
Query: 384 DAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLRVV--------SAAAEHE--------------------DCEDLLETVHD-------ELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAEHMAGLVEKCV 938
DA AT W++ V+GL LCPWAAG L G +LRV+ AA +++ D DLLE + + L+ L G + ATTL+V RPP Q F +FLSV VD ID LRG VQLATFHP+Y+F+G+ DD +N+TNRSP+P LHLL ED+VS AV D ++VW RN + +LG E M VE C+
Sbjct: 121 DAIAQATLRWIRSTVIGLNLCPWAAGALVGGQLRVLVHPAQQPLPAATDYQERLPGSDVGGGVSKDSGASSDAADLLEGLVEVATGEAVALSALGGEAAAN-ATTLVVARPPLAQGFEEFLSVAGAVDEFIDESGLRGKVQLATFHPQYRFEGSEEDDASNYTNRSPYPVLHLLLEDQVSAAVEQI----SDPAKVWERNVDTTRKLGVEAMRRGVEACL 335
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: UPI000579371E (DUF1415 domain-containing protein n=1 Tax=Cupriavidus sp. IDO TaxID=1539142 RepID=UPI000579371E) HSP 1 Score: 148 bits (373), Expect = 4.700e-38 Identity = 82/181 (45.30%), Postives = 114/181 (62.98%), Query Frame = 3
Query: 369 SPAIPDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLR-VVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAE 908
SPA DA ATRHWL+R V+GL LCP+A V +++R VVS A E D+L+ + EL +LA TTL++V P AL DF D+ + + L+ +RL G +Q+A+FHP+YQF G PDD+ N+TNR+P+P LHLLRED ++ A A++ D + ++ RNQE M LG E
Sbjct: 6 SPA--DAVIAATRHWLERAVIGLNLCPFAKSVYVKEQVRYVVSTATE---APDVLDDLERELKLLADADPAQIDTTLLIV-PDALADFIDYNDLLYFAERLLGSLRLEGTLQIASFHPQYQFSGTEPDDIENYTNRAPYPILHLLREDSIARAAAAF----PDAADIYERNQETMRRLGHE 176
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: UPI001835A4A6 (DUF1415 domain-containing protein n=1 Tax=Lysobacter sp. TaxID=72226 RepID=UPI001835A4A6) HSP 1 Score: 147 bits (372), Expect = 5.150e-38 Identity = 88/178 (49.44%), Postives = 109/178 (61.24%), Query Frame = 3
Query: 372 PAIPDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLR-VVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELG 902
P PD F TR WL+R V+GL LCP+A V ++R V+S A E D LLE + +ELA L D TTLIV P LQDF D+ D D L++ M L G +Q+A+FHP YQF G+ PDD+ NFTNRSPFPTLHLLRED VS AV ++ D + R N E +E+LG
Sbjct: 5 PIAPD-FIADTRRWLERAVIGLNLCPFAKAVHAKGQVRWVLSDATEPSD---LLEELGEELAFLRDADPADVDTTLIV-HPHVLQDFIDYNDFLGDADDLVEAMELDGVLQVASFHPDYQFAGSDPDDIANFTNRSPFPTLHLLREDSVSRAVDAFPDPDVIVER----NVETLEKLG 173
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: UPI001F5A5D2E (DUF1415 domain-containing protein n=2 Tax=unclassified Lysobacter TaxID=2635362 RepID=UPI001F5A5D2E) HSP 1 Score: 144 bits (363), Expect = 8.750e-37 Identity = 76/167 (45.51%), Postives = 103/167 (61.68%), Query Frame = 3
Query: 402 TRHWLQRVVVGLRLCPWAAGVLEGDRLRVVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELG 902
TR WL+R V+GL LCP+A V D++R V + A+ D DLLE + +EL +L D T +++ P LQDF D+ D DAL+ + L G +Q+A+FHP YQF G PDD+ N+TNRSP+PTLHLLRED V+ AV ++ D + R NQ + ELG
Sbjct: 11 TRRWLERAVIGLNLCPFAKAVHARDQIRYVLSDAD--DPRDLLEQLGEELLLLCDT-PADVVDTTLLIHPQVLQDFLDYNDFLDDADALLAQLGLEGVIQIASFHPHYQFAGTEPDDIGNYTNRSPYPTLHLLREDSVARAVEAFPDPDAIVER----NQRTLAELG 170
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: A0A3D5PYI4_9GAMM (DUF1415 domain-containing protein n=1 Tax=Marinobacter sp. TaxID=50741 RepID=A0A3D5PYI4_9GAMM) HSP 1 Score: 144 bits (363), Expect = 1.010e-36 Identity = 82/193 (42.49%), Postives = 119/193 (61.66%), Query Frame = 3
Query: 348 SDLALSASPAIPDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLRVVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAEHMAGLV 926
+D SASP I D TR W++RVVVGL LCP+A LE DR+R V A+ E+ LL+ +H EL L ++ TTL+++ P ALQDF D+L+ + + L+D + L G Q+A+FHP Y+F+G P+D N+TNRSP+P LHLLRED ++ A+ + D+ + GRN E M +G + + L+
Sbjct: 2 TDTRESASPVISD-----TRRWVERVVVGLNLCPFARKELEADRVRFVETDADSEEA--LLQALHAELQHL--EDSPETETTLLIL-PKALQDFDDYLNFLAMAEDLLDYLGLEGIYQIASFHPCYRFEGTGPEDAENYTNRSPWPMLHLLREDSLAQAIDRH----PDVEGIPGRNIERMNRIGVDKLRELL 180
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: Q46YG4_CUPPJ (Uncharacterized protein n=5 Tax=Cupriavidus TaxID=106589 RepID=Q46YG4_CUPPJ) HSP 1 Score: 144 bits (364), Expect = 1.040e-36 Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 3
Query: 360 LSASPAIPDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLR-VVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAEHMAGLVEKCVADGEADVAA 965
+ +S + PDA ATRHWL R V+GL LCP+A V +++R VVS A E D+L+ + EL +LA TTL++V P AL DF D+ + L+ +RL G +Q+A+FHP+YQFDG PDD+ N+TNR+P+P LHLLRED ++ A ++ D + ++ RN E + LG E + DG+ D AA
Sbjct: 1 MPSSASHPDAVIAATRHWLARAVIGLNLCPFAKSVYVKEQVRYVVSTATE---APDVLDDLERELKLLAETDAARVDTTLLIV-PDALADFIDYNDFLYFAERLLKSLRLEGTLQIASFHPQYQFDGTEPDDIENYTNRAPYPILHLLREDSIARAADAF----PDAADIYERNMETVRRLGHEGWQRWM-----DGDDDAAA 190
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: A0A1E4QXB0_9BURK (Peptidase n=2 Tax=unclassified Cupriavidus TaxID=2640874 RepID=A0A1E4QXB0_9BURK) HSP 1 Score: 144 bits (364), Expect = 1.470e-36 Identity = 83/200 (41.50%), Postives = 119/200 (59.50%), Query Frame = 3
Query: 357 ALSASPAIPDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLR-VVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAEHMAGLVEKCVADGEA 953
A+ +S + DA ATRHWL R V+GL LCP+A V +++R VVS A E D+L+ + EL +LA TTL++V P AL DF +F V + L+ +RL G +Q+A+FHP+YQF+G PDD+ N+TNR+P+P LHLLRED ++ A ++ D + ++ RN E M LG E L++ D A
Sbjct: 9 AMPSSASHQDAVIAATRHWLARAVIGLNLCPFAKSVYVKEQVRYVVSQATE---AADVLDDLERELKLLAETEPAQVDTTLLIV-PDALADFLEFNDVLFFAERLLKSLRLEGMLQIASFHPQYQFEGTEPDDIENYTNRAPYPILHLLREDSIARAAEAF----PDAADIYERNMETMRRLGHEGWQRLMDGNDGDDSA 200
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: A0A516V5K9_9GAMM (DUF1415 domain-containing protein n=1 Tax=Lysobacter lycopersici TaxID=1324796 RepID=A0A516V5K9_9GAMM) HSP 1 Score: 143 bits (361), Expect = 2.330e-36 Identity = 83/182 (45.60%), Postives = 105/182 (57.69%), Query Frame = 3
Query: 363 SASPAIPDAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLRVVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAE 908
+A P PD R WL+R V+GL LCP+A V ++R+V + A E LLE + +E+AML D TTL+V P LQDF D+ D DAL++ M L G +Q+A+FHP YQF G DD N TNR+P+P LHLLRED V AVA+Y D + R N M ELGAE
Sbjct: 5 NAEPFDPDRVERDVRRWLERAVIGLNLCPFAKAVYAKQQVRIVVSDATTERA--LLEQLGEEMAMLRDTPAEDIDTTLLV-HPQVLQDFLDYNDFLDDADALVETMELDGVLQVASFHPHYQFAGTEADDAENLTNRAPWPILHLLREDSVDRAVAAYPEPDAIIER----NVATMRELGAE 179
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Match: UPI001B069E04 (DUF1415 family protein n=2 Tax=Cupriavidus TaxID=106589 RepID=UPI001B069E04) HSP 1 Score: 144 bits (362), Expect = 2.450e-36 Identity = 75/175 (42.86%), Postives = 109/175 (62.29%), Query Frame = 3
Query: 384 DAFTLATRHWLQRVVVGLRLCPWAAGVLEGDRLRVVSAAAEHEDCEDLLETVHDELAMLAGRGKVDSATTLIVVRPPALQDFSDFLSVTSDVDALIDGMRLRGAVQLATFHPRYQFDGAAPDDVTNFTNRSPFPTLHLLREDEVSMAVASYLGGDGDLSRVWGRNQELMEELGAE 908
DA ATRHWL R V+GL LCP+A V +++R V A+ + D+L+ + EL +LA TTL++V P AL DF +F + + L+ +RL G +Q+A+FHP+YQF+G PDD+ N+TNR+P+P LHLLRED ++ A A++ D + ++ RN E M LG E
Sbjct: 9 DAVIAATRHWLARAVIGLNLCPFAKSVYVKEQVRYVVCDAK--EAADVLDVLERELKLLAETDPAQVDTTLLIV-PEALADFLEFNDLLYFAERLLGSLRLEGMLQIASFHPQYQFEGTEPDDIENYTNRAPYPILHLLREDSIARAAAAF----PDAADIYERNMETMRRLGHE 176 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6972.1.1 >prot_P-wetherbeei_contig6972.1.1 ID=prot_P-wetherbeei_contig6972.1.1|Name=mRNA_P-wetherbeei_contig6972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp MRCATRLLPAIALLPGARSFLFRPFSFTATRRFGSKRWTALVEAAFAREMback to top mRNA from alignment at P-wetherbeei_contig6972:75..1740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6972.1.1 ID=mRNA_P-wetherbeei_contig6972.1.1|Name=mRNA_P-wetherbeei_contig6972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1666bp|location=Sequence derived from alignment at P-wetherbeei_contig6972:75..1740+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6972:75..1740+ >mRNA_P-wetherbeei_contig6972.1.1 ID=mRNA_P-wetherbeei_contig6972.1.1|Name=mRNA_P-wetherbeei_contig6972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig6972:75..1740+ (Phaeothamnion wetherbeei SAG_119_79)back to top |