prot_P-wetherbeei_contig696.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig696.1.1
Unique Nameprot_P-wetherbeei_contig696.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length216
Homology
BLAST of mRNA_P-wetherbeei_contig696.1.1 vs. uniprot
Match: D7G491_ECTSI (Similar to Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3), partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G491_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 2.470e-40
Identity = 88/213 (41.31%), Postives = 132/213 (61.97%), Query Frame = 0
Query:    4 RPRDCNERTRHVAAEVAALRKQAEAVAQEEQKLEGTSHGKQLAMVAELEEVLRPVADLWGAAVAVAKNLASWTRTPVTALDGAAVRVEHTKLRETLMGLLQGLRVAKRDAPAKAAQEALLQLESFEKDIPVVLALSSPEFRAQHWRQVSALAGVTLSREHPTTLQQLNELGALTDTKATNIVKIGAEATEEAALLRQLRPVELFVRDEAVLRL 216
            RPR+ +E    ++ E+A L+ QA  + +EE K++G + G  +A+  ++    +P ADLW    +V   + +  R PVT L+   +  EH  +++ L  L++ +       P KAAQE+L  L + EKDIP++ AL++P  + +HW Q+SALAGVT+S EHPTTLQQLNEL  LTDTKA  I+++  +A  E AL      V+ FV +EAVLR+
Sbjct: 1528 RPREMSENAASISKELAGLKAQAVDIGEEEAKVDGHTSGTLVALAEKVIVSFQPYADLWSLVGSVGPFITTIMRAPVTTLNPEEITAEHASIKQRLEALIKIMEAKSHANPTKAAQESLRLLAALEKDIPILKALTNPHLKDRHWWQISALAGVTVSVEHPTTLQQLNELDVLTDTKADAILRLSDDADAEHALETSTAEVDRFVSEEAVLRI 1740          
BLAST of mRNA_P-wetherbeei_contig696.1.1 vs. uniprot
Match: A0A6H5L524_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L524_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.860e-32
Identity = 86/253 (33.99%), Postives = 133/253 (52.57%), Query Frame = 0
Query:    4 RPRDCNERTRHVAAEVAALRKQAEAVAQEEQKLEGTSHGKQLAMVAELEEVLRPVADLWGAAVAVAKNLASWTRTPVTALDGAAVRVEHTKLRET-----------------------------LMGLLQGLRVAKRDAPAKAAQEALLQLESFEKDIPVVLALSSPEFRAQHWRQVSALAGVTLSREHPTTLQQLNELGALTDTKATNIV-----------KIGAEATEEAALLRQLRPVELFVRDEAVLRL 216
            RPR+ +E    ++ E+A L+ QA  + +EE K++G + G  +A+  ++    +P AD+W    +V   + +  R PVT L+   +  EH  +++                              L  L++ +    +  P KAAQE+L  L + EKDIP++ AL++P  + +HW Q+SALAGVT+S EHPTTLQQLNEL  LTD KA  I+            + ++A  E AL +    V+ FV +EAVLR+
Sbjct: 1715 RPREMSETAASISKELAGLKAQAVDIGEEEAKVDGHTSGALVALAEKVIVSFQPYADIWSLVGSVGPFITTVMRAPVTTLNPEEITAEHASIKQRWSKFSFLANTSPVKCVLFLLSNCSDPSFRLEALIKIMEARSQATPTKAAQESLRLLAALEKDIPIIKALTNPRLKDRHWWQISALAGVTVSVEHPTTLQQLNELDVLTDIKADAILLTSTKQLIIFNMLNSDADAEHALEKSTAEVDRFVSEEAVLRI 1967          
BLAST of mRNA_P-wetherbeei_contig696.1.1 vs. uniprot
Match: A0A7S4SC59_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SC59_9DINO)

HSP 1 Score: 59.3 bits (142), Expect = 1.120e-6
Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = 0
Query:   48 VAELEEVLRPVADLWGAAVAVAKNLASWTRTPVT-------ALDGAAVRVEHTKLRETLMGLLQGLRVAKRDAPAKAAQEALLQLESFEKDIPVVLALSSPEFRAQHWRQVSALAGVTLSREHPTTLQQLNELGALTDTKATNIVKIGAEATEE 194
            +AE+   L+P   LW       +  A WT++P+        A D         +  + L   L+G   A+   P +  Q   L LE     +P++ A+++P+   +HWR++ A+ G  L R+H  TLQ+L ++     + A +I++I   AT+E
Sbjct: 1159 LAEVHAALQPFKSLWILVREYQQAHALWTKSPLVCSQLPFRAEDVQEEAAAMHRRAKALQARLEGEGAAR---PGRVVQRLSLDLELLRDSLPLLRAVANPDLGERHWREIYAVLGFVLERDHALTLQRLLDMDI--GSYAMDIIEISEGATKE 1307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig696.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G491_ECTSI2.470e-4041.31Similar to Dynein heavy chain 3, axonemal (Axonema... [more]
A0A6H5L524_9PHAE6.860e-3233.99DHC_N2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S4SC59_9DINO1.120e-627.27Hypothetical protein n=2 Tax=Alexandrium monilatum... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availablePANTHERPTHR45703:SF1DNAH12 ISOFORM 2coord: 13..203
NoneNo IPR availablePANTHERPTHR45703DYNEIN HEAVY CHAINcoord: 13..203
IPR013602Dynein heavy chain, linkerPFAMPF08393DHC_N2coord: 50..207
e-value: 3.9E-18
score: 65.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig696contigP-wetherbeei_contig696:576..2245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig696.1.1mRNA_P-wetherbeei_contig696.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig696 576..2263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig696.1.1 ID=prot_P-wetherbeei_contig696.1.1|Name=mRNA_P-wetherbeei_contig696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
MGGRPRDCNERTRHVAAEVAALRKQAEAVAQEEQKLEGTSHGKQLAMVAE
LEEVLRPVADLWGAAVAVAKNLASWTRTPVTALDGAAVRVEHTKLRETLM
GLLQGLRVAKRDAPAKAAQEALLQLESFEKDIPVVLALSSPEFRAQHWRQ
VSALAGVTLSREHPTTLQQLNELGALTDTKATNIVKIGAEATEEAALLRQ
LRPVELFVRDEAVLRL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013602Dynein_heavy_linker