mRNA_P-wetherbeei_contig6940.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI) HSP 1 Score: 157 bits (396), Expect = 5.680e-40 Identity = 137/390 (35.13%), Postives = 177/390 (45.38%), Query Frame = 3
Query: 156 NVVITGGNRGLGYALADEMLRRG-HRVVLGCRDVALGREAAATLARAHVVQKGRP-SPVAVK-------LDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRD-----------KGTFERTFATNFFGALRMMNACVEATQWHS----------------NDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFDER------------------------QEHAFGPTPAYSVSKAALNAAVRLAGPAL------------------LTRRGVAVTAVCPGDVNTRMCSAVAPEASPAVPVSAXXXXXXXXXXXXGKAASAGVLSAAQAARFVADVGLRPTV-YPPGRFYRFGREIPW 1088
NV++TG NRGLG+A+AD ML+ G +RVVL CR+ GR+A L ++ R +A LDVT SV F E+ + GGRVD+LFNNA VCF +D G T A NFFGAL ++ ACV A Q + ++G + S+K ++ +SSGDGELC+L S R EA SLEDV + ++DLL + +E AFGPTPAYS+SKAA+NAAVR P + + GV + AVCPGDV TRM S + A +S +AA V D+ L P GRFYR G EI W
Sbjct: 55 NVIVTGANRGLGFAIADRMLKLGSYRVVLACRNEQEGRDALERLRGKQQQRRQRQYGTIATNFLASFFPLDVTCPRSVEVFREDCVNGHLGGRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLK--PPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKE-------------------------EMARGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA) HSP 1 Score: 142 bits (358), Expect = 1.470e-35 Identity = 100/242 (41.32%), Postives = 138/242 (57.02%), Query Frame = 3
Query: 162 VITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVN---DLLTDFDERQEHAFGPTPAYSVSKAALNAAVRLAGPALLTRRGVAVTAVCPGDVNTRM 878
++TGG RGLGYA+A+ M RRG+ VV+ RD +G EAA + R+ + +G + KLD+ + S+ F + + GG VDVLFNNAAVC EG + +F N G L ++ +E Q +D E R+S + C + NVSS +GEL YL S+L + A++ +D A + + DFD E+AFGPTP YSVSKAAL A ++ R AV AVCPGDV+T M
Sbjct: 24 IVTGGTRGLGYAIAERMARRGYDVVIAGRDENIGNEAATNIQRS-ISTRGVGTVSYRKLDLENAESINNFRQWCRRNVEGG-VDVLFNNAAVCLEGSNVEVARSSFQINVIGPLALVEGLME--QQKMDDRRER-RKSTQRC---VINVSSSEGELGYLHSSLAEALLTASASDDPQAVIRVLESIQNDFDPLLEYAFGPTPFYSVSKAALIALTQVLARRDPDGRSFAVHAVCPGDVSTSM 257
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA) HSP 1 Score: 133 bits (335), Expect = 5.920e-32 Identity = 115/332 (34.64%), Postives = 159/332 (47.89%), Query Frame = 3
Query: 162 VITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLL--TDFDERQEHAFGPTPAYSVSKAALNAAVRL----------------AGPALL-----TRRGVAVTAVCPGDVNTRMCSAVAPEASPAVPVSAXXXXXXXXXXXXGKAASAGVLSAAQAARFVADVGLRPTVYPPGRFYRFGREIPW 1088
++TG +RGLG A+A ++++ + V+L R A G +AA+ L+ AH +G +LDV+ S+ F + + + G + +FNNA VC G D T + + NF+G LR+M AC+ +E G + NVSSGDGEL +L+S + + +A +++DV AA +D+L D E AFG TPAYSVSKA LNAAVR AG A T + AV AVCPGDV T M S +A GVLSA +AA V + G FYR+G IPW
Sbjct: 50 LVTGASRGLGLAVATLLVQQDYHVILTARSEADGLKAASDLS-AHC--QGTGEITFRQLDVSSPDSIKHFATQCLPTLPSGSLTAVFNNAGVCLPGADIATLQYSLGVNFYGPLRVMEACLPFM-------DEEGV---------VVNVSSGDGELLWLNSDIAEALRQAQTVQDVRAAADDILQRAALDPGAELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEGALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMASEE-------------------------EAQREGVLSALEAAAHVVGLATWRERTAGGLFYRYGAVIPW 337
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: R1DJ38_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ38_EMIHU) HSP 1 Score: 120 bits (301), Expect = 5.590e-26 Identity = 99/266 (37.22%), Postives = 126/266 (47.37%), Query Frame = 3
Query: 99 PRRARLRPENGRKCYVVALNVVITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFD----ERQEHAFGPTPAYSVSKAALNAAVRLAGPALLTRRGVAVTAVCPGDVNTRMCS 884
P R + R+ ++ ++TG NRG+G A A + G VVL CRD + REAAA L+ V+ P A D S + A S RVD+L NNAAVC G + R+F TN + A + ++ ++ +VSSGDGEL +LSS L R AAS ++ + L D + A GPTPAYSVSKAALN RL G AL GV V A CPGDV TRMCS
Sbjct: 276 PNPVRQSRQRSRQRMLLDNTALVTGANRGIGLATAGRLAELGASVVLACRDESACREAAAALS----VRGLAAEPYAASFDAECPRSTSAL-AAACASL---RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGM--------------LRRRRGAVLHVSSGDGELVFLSSDLAPRLAGAASERELLRLLARLSRGRDGFRFPDRPPAHGPTPAYSVSKAALNRHTRLVGDALPRDGGVWVGAACPGDVRTRMCS 519
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: R1EIL5_EMIHU (DNA ligase (ATP) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EIL5_EMIHU) HSP 1 Score: 119 bits (298), Expect = 3.070e-25 Identity = 96/245 (39.18%), Postives = 119/245 (48.57%), Query Frame = 3
Query: 162 VITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFD----ERQEHAFGPTPAYSVSKAALNAAVRLAGPALLTRRGVAVTAVCPGDVNTRMCS 884
++TG NRG+G A A + G VVL CRD + REAAA L+ V+ P A D S + A S RVD+L NNAAVC G + R+F TN + A + ++ ++ +VSSGDGEL +LSS L R AAS ++ + L D + A GPTPAYSVSKAALN RL G AL GV V A CPGDV TRMCS
Sbjct: 8 LVTGANRGIGLATAGRLAELGASVVLACRDESACREAAAALS----VRGLAAEPYAASFDAECPRSTSAL-AAACASL---RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGM--------------LRRRRGAVLHVSSGDGELVFLSSDLAPRLAGAASERELLRLLARLSRGRDGFRFPDRPPAHGPTPAYSVSKAALNRHTRLVGDALPRDGGVWVGAACPGDVRTRMCS 230
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: A0A7S0NQP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQP3_9EUKA) HSP 1 Score: 112 bits (279), Expect = 1.380e-24 Identity = 101/249 (40.56%), Postives = 123/249 (49.40%), Query Frame = 3
Query: 162 VITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLE---DVTAAVNDLLTDFDERQEHAFGPTPAYSVSKAALNAAVRL-----AGPALLTRRGVAVTAVCPGDVNTRMCS 884
V+TG NRGLG ALA + G V+L RD AATLA + P+ LDV+D SV F E SQ +VL NNAAVC G + R+ TN G L + C E G A R++ + + NVSSGDGEL YL+SAL+ F A+S+ + A V H+ PTPAYSVSKAALNA R+ AG V AVCPGDV+TRMCS
Sbjct: 6 VVTGANRGLGAALARCLAMSGCSVLLTGRDAPAVGRLAATLASTGLPAFAYPAA----LDVSDMRSVRNFAEHCARSQA--VPEVLINNAAVCERGWTRQVVRRSLKTNVIGPLAL---CREL----GAVGCAAPRRARR---LRVLNVSSGDGELVYLNSALQDEFRRASSVRTLLQLLARVTPPRQTIGGAPAHS--PTPAYSVSKAALNALTRILAGEHAGGTSELCASVWFAAVCPGDVSTRMCS 236
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: A0A7S2ZT12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT12_9RHOD) HSP 1 Score: 105 bits (262), Expect = 2.550e-22 Identity = 92/245 (37.55%), Postives = 118/245 (48.16%), Query Frame = 3
Query: 162 VITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFDER------QEHAFGPTPAYSVSKAALNAAVRLAGPALLTRRGVAVTAVCPGDVNTRM 878
++TG RGLG A+ +E+ H V+L RDV G A + R KG ++LDV D S ++ G +DV+ NNAAVC E NFFGA+R + AC+ Q + D A I NVSSGDGE + S+A+R+RFE S T A+ D L DF E+ +E G P Y VSK ALN RL L G+ V +VCPGDV TRM
Sbjct: 9 LVTGATRGLGLAIVEELAGLNHHVLLTGRDVEKGYVEAGSFQR-----KGFDVRF-LELDVCDERSAENL--ALVVRDQYGALDVIVNNAAVCLEEWSSSALTNCLEVNFFGAVRTV-ACLG--QLLAKD-------------ACILNVSSGDGESVWFSTAVRERFEGVQS----TNALLDALRDFAEKADAVPPEEVVHGEQPTYKVSKFALNCYTRLLHNDL-NESGIRVLSVCPGDVRTRM 224
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: UPI001CCE85C7 (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Hyalangium sp. H56D21 TaxID=2861190 RepID=UPI001CCE85C7) HSP 1 Score: 101 bits (251), Expect = 8.420e-21 Identity = 89/247 (36.03%), Postives = 116/247 (46.96%), Query Frame = 3
Query: 159 VVITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGGRVDVLFNNAAVCFEGRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFDERQEHAFG-PTPAYSVSKAALNAAVRLAGPALLTRRGVAVTAVCPGDVNTRMCSAVAP 896
V++TGGNRG+G+ + ++ R G RV+L RD A G +AA TL + P LDV S+ + L + G R+ L NNAA+ +G D E+T NFFGA + E G K H + VSS GEL L +R+RF+ S E + A V + + D Q G P AY VSKAALNA R R+ + V AVCPG V TRM AP
Sbjct: 8 VLVTGGNRGIGFEVCRQLARAGMRVLLTARDTAGGEQAARTLRTESLDVVFEP------LDVASQESILTLATK--LERQGQRLSALVNNAAITMDGFDARVAEQTTVVNFFGAWLVA--------------ERLGLLLEK--HGRLVMVSSDGGELGRLCPEIRRRFDPPPSKETLAALVREFIEDVRSGQFARKGWPRSAYRVSKAALNALTRRLAEEFKERQ-LLVNAVCPGWVRTRMGGPSAP 229
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: K8Z388_NANGC (Short-chain dehydrogenase reductase family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z388_NANGC) HSP 1 Score: 102 bits (253), Expect = 1.140e-20 Identity = 100/344 (29.07%), Postives = 145/344 (42.15%), Query Frame = 3
Query: 141 YVVALNVVITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQG--GGRVDVLFNNAAVCFEGRD-----------KGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFDER----QEHAFGPT--PAYSVSKAALNAAVRLAGP---ALLTR------RGVAVTAVCPGDVNTRMCSAVAPEASPAVPVSAXXXXXXXXXXXXGKAASAGVLSAAQAARFVADVGLRPTVYPPGRFYRFGREIPW 1088
+ + V+TGGNRGLG A++D + G+ V+L R+ G+ A + R H G+ + LDV++ S+ F ++ ++ GG VL NNA +C D +G + F N + + ++ AC+ H GC I N+SSGDGEL YL S + KR + SL ++ +D + + + P PAYS SKA LNAA +L AL+++ + A+CPGDVNT MC + A+ LS QAA V L G FYR R IPW
Sbjct: 18 FTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRH----GQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALIEACLPGMCKHGF-----------GC---IVNISSGDGELAYLHSEVAKRLKRVRSLAELKQ-FSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATQLLQSRVDALISKDMKVRAHQPRIVAICPGDVNTAMCD---------------------------EHAAHNALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Match: A0A3N5AMK0_9ACTN (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A3N5AMK0_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 4.550e-20 Identity = 92/249 (36.95%), Postives = 112/249 (44.98%), Query Frame = 3
Query: 162 VITGGNRGLGYALADEMLRRGHRVVLGCRDVALGREAAATLARAHVVQKGRPSPVAVKLDVTDGVSVAGFFEEAILSQGGG---RVDVLFNNAAVCFE------GRDKGTFERTFATNFFGALRMMNACVEATQWHSNDGEEAGRQSIKGCHASISNVSSGDGELCYLSSALRKRFEEAASLEDVTAAVNDLLTDFDERQEHAFGPTPAYSVSKAALNAAV-RLAGPALLTRRGVAVTAVCPGDVNTRM 878
V+TGGNRG+GY + ++ RGH VVLG RD+A GR AAA V G AV+LDV+D SVA A+ GG RVDV+ NNAA+ ++ D G +R TN FGA R+ A + Q + H + VSS G L +S G TPAYSVSKAALNA LAG L R V V A+CPG V T M
Sbjct: 43 VVTGGNRGIGYEVVRQLAARGHHVVLGSRDLAKGRAAAAR------VDPGGERVSAVQLDVSDAASVA-----AMADWVGGNLRRVDVVVNNAAILYDTWAQARSADLGEVQRALDTNLFGAWRVTQALLPLLQ--------------RSPHPRVVMVSSEGGSLQSMS-----------------------------------GGTPAYSVSKAALNALTCLLAGE--LRRHRVLVNAICPGWVATDM 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6940.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6940.1.1 >prot_P-wetherbeei_contig6940.1.1 ID=prot_P-wetherbeei_contig6940.1.1|Name=mRNA_P-wetherbeei_contig6940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=363bp MGAAVAKFLACVVVLLVPPRNARALCCRGGNAPRRARLRPENGRKCYVVAback to top mRNA from alignment at P-wetherbeei_contig6940:1575..2992+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6940.1.1 ID=mRNA_P-wetherbeei_contig6940.1.1|Name=mRNA_P-wetherbeei_contig6940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1418bp|location=Sequence derived from alignment at P-wetherbeei_contig6940:1575..2992+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6940:1575..2992+ >mRNA_P-wetherbeei_contig6940.1.1 ID=mRNA_P-wetherbeei_contig6940.1.1|Name=mRNA_P-wetherbeei_contig6940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig6940:1575..2992+ (Phaeothamnion wetherbeei SAG_119_79)back to top |